Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G029800.1 | Wheat | cytosol | 95.62 | 95.7 |
| TraesCS2B01G044900.2 | Wheat | cytosol | 74.6 | 74.87 |
| Os04t0111900-02 | Rice | cytosol, mitochondrion | 52.95 | 53.87 |
| TraesCS2B01G043300.1 | Wheat | cytosol | 29.34 | 51.01 |
| TraesCS2B01G044700.1 | Wheat | cytosol, nucleus, plastid | 45.89 | 45.76 |
| TraesCS2B01G042500.1 | Wheat | cytosol | 45.35 | 45.07 |
| TraesCS2B01G043700.1 | Wheat | cytosol | 38.37 | 43.16 |
| TraesCS2B01G045700.1 | Wheat | mitochondrion | 46.69 | 43.14 |
| TraesCS3B01G468200.1 | Wheat | cytosol | 40.25 | 39.68 |
| TraesCS1B01G269800.1 | Wheat | cytosol | 37.57 | 37.77 |
| TraesCS2B01G042700.1 | Wheat | endoplasmic reticulum, mitochondrion, plastid, vacuole | 21.47 | 37.27 |
| TraesCS3B01G364900.1 | Wheat | cytosol | 29.16 | 29.19 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 22.9 | 27.5 |
| TraesCS1B01G320500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.55 | 27.26 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 26.39 | 27.09 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 27.28 | 26.43 |
| TraesCS5B01G444200.1 | Wheat | cytosol | 27.46 | 26.13 |
| TraesCS7B01G299800.2 | Wheat | extracellular, plasma membrane | 29.96 | 25.61 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 16.01 | 23.43 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G045400.1 | EnsemblPlantsGene:TraesCS2B01G045400 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:22317491..22320847
Molecular Weight (calculated)
123980.0 Da
IEP (calculated)
8.352
GRAVY (calculated)
-0.038
Length
1118 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPPMPMSLV FPSLDPPKPA ALLSMDLLLE EAFRAMARAA EQFRSLGEKQ AKRLMVAGSG GGKLREVATQ LEQVRDLLGA VDDGGSSPAA AAESFYGIDD
0101: LLDEMEYHML AFHLEASANT NPKVSNPLAS ALRLGRRFLS SSSSSSDGAS RSRWFLKDLD SVAATLTSLL NQVQGSSLPL AISDAPPQDH KLFGRTRELN
0201: DIVQMLTEPL SSHHPTLKVI SIVGFGGLGK TTLAQSVYDH IGVQRHFDLT AWAHVSAKPD RLELAAQILR SASPAYRGSI DKDATFGALQ SQLTQLLASK
0301: RFLLVLDDVW DVPQDTWQEL LIPLKSAQSG SRIIVTTRTP KVADMLGASH TYHLNPLGIE DCWSLFHRYA FGGWSTHDSS DELEQIGRTI VAKVDGLPLA
0401: VKVLAGLLGA TKSTKYWRII SEKQFSGDAT LSSLRLSYSY LPGRLKQCFA FCSIFPRNWK FDQRTMIRLW MANGFIQSQT DTGKRMEDLG TDYFNALLSR
0501: SFFQTLRQGP RTHCIMHDLI HDLAVSVSTN DCFQFEPGVT RFIPSTVRHI SVTTDGTEDI NAAINMLPKK LRTLLVLRTR SFSSYCLQGD FLAKLKTLRV
0601: LDISHSDYTE LPRSISCLIH LRYLSLCRTI RSLPESTSKL LHLQTLHFTD RCSLDKLPAG INRLVKLRHL GIDMKYIAQL PGIGRLINLQ GSVEFCVKKG
0701: GGHALQELKG MNGLHGQLKI KGLDNVLSKD EATKTDMKRK ENLKALRLEW SSASRGLTPV TDYEVLENLQ PHQNLKELHI VRYLGATAPS WLQFAALREL
0801: QSLHLVNCRS LGVLPPLGLL PSLQQLHMKE LCTVKRIGHE FYGTVDLSFP SLKVLVFDDF PSLVEWSEVR ADPFPCLQKL EIVDCPKLIQ VPAFPPSVSE
0901: LKVERTLLIS NMRLAPYSSS RLEIFTLSVS TTSVLCRGLF HQSHLESIVV LNINAGYKQL VSAEGLHCFT SLQKLQLCHS DISDQDLGSL LQVLPSLYSV
1001: EMIDLPNMTS LLVPTKNNLC TTVTELQISN CPQLSSMVSL GTFVSLKRLV IEKCPKLTAA SFPVSFWRLT ALKVLSISYC TEFQSLPSCG LPTSIEALHL
1101: VGCHPKLHEN SSNRTVNS
0101: LLDEMEYHML AFHLEASANT NPKVSNPLAS ALRLGRRFLS SSSSSSDGAS RSRWFLKDLD SVAATLTSLL NQVQGSSLPL AISDAPPQDH KLFGRTRELN
0201: DIVQMLTEPL SSHHPTLKVI SIVGFGGLGK TTLAQSVYDH IGVQRHFDLT AWAHVSAKPD RLELAAQILR SASPAYRGSI DKDATFGALQ SQLTQLLASK
0301: RFLLVLDDVW DVPQDTWQEL LIPLKSAQSG SRIIVTTRTP KVADMLGASH TYHLNPLGIE DCWSLFHRYA FGGWSTHDSS DELEQIGRTI VAKVDGLPLA
0401: VKVLAGLLGA TKSTKYWRII SEKQFSGDAT LSSLRLSYSY LPGRLKQCFA FCSIFPRNWK FDQRTMIRLW MANGFIQSQT DTGKRMEDLG TDYFNALLSR
0501: SFFQTLRQGP RTHCIMHDLI HDLAVSVSTN DCFQFEPGVT RFIPSTVRHI SVTTDGTEDI NAAINMLPKK LRTLLVLRTR SFSSYCLQGD FLAKLKTLRV
0601: LDISHSDYTE LPRSISCLIH LRYLSLCRTI RSLPESTSKL LHLQTLHFTD RCSLDKLPAG INRLVKLRHL GIDMKYIAQL PGIGRLINLQ GSVEFCVKKG
0701: GGHALQELKG MNGLHGQLKI KGLDNVLSKD EATKTDMKRK ENLKALRLEW SSASRGLTPV TDYEVLENLQ PHQNLKELHI VRYLGATAPS WLQFAALREL
0801: QSLHLVNCRS LGVLPPLGLL PSLQQLHMKE LCTVKRIGHE FYGTVDLSFP SLKVLVFDDF PSLVEWSEVR ADPFPCLQKL EIVDCPKLIQ VPAFPPSVSE
0901: LKVERTLLIS NMRLAPYSSS RLEIFTLSVS TTSVLCRGLF HQSHLESIVV LNINAGYKQL VSAEGLHCFT SLQKLQLCHS DISDQDLGSL LQVLPSLYSV
1001: EMIDLPNMTS LLVPTKNNLC TTVTELQISN CPQLSSMVSL GTFVSLKRLV IEKCPKLTAA SFPVSFWRLT ALKVLSISYC TEFQSLPSCG LPTSIEALHL
1101: VGCHPKLHEN SSNRTVNS
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.