Factsheet for Os04t0111900-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G045400.1	Wheat	cytosol, nucleus, plasma membrane	53.87	52.95
TraesCS2A01G029800.1	Wheat	cytosol	53.78	52.91
TraesCS2B01G044900.2	Wheat	cytosol	53.59	52.87
TraesCS2A01G030000.2	Wheat	cytosol	53.59	52.59
Os05t0414200-01	Rice	cytosol	14.47	37.15
Os05t0492600-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.74	32.8
Os05t0414300-02	Rice	cytosol	19.2	32.61
Os05t0492200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.12	29.45
Os07t0273900-01	Rice	cytosol	18.56	28.25
Os04t0512900-01	Rice	nucleus	19.02	27.83
Os03t0324600-01	Rice	cytosol	26.84	27.49
Os06t0619000-01	Rice	cytosol	29.21	27.41
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	24.57	26.24
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	26.84	25.56
VIT_15s0024g00440.t01	Wine grape	cytosol	21.02	24.81
Os01t0308300-00	Rice	plastid	24.11	24.54
Os07t0273600-01	Rice	mitochondrion	9.1	22.94
VIT_15s0024g00450.t01	Wine grape	cytosol	15.47	22.25
Os06t0667900-00	Rice	plasma membrane	23.75	22.19
Os03t0579200-00	Rice	cytosol	23.57	20.79
Os01t0178900-01	Rice	cytosol	9.55	19.96
Os04t0112100-01	Rice	cytosol, plastid	5.73	18.58
Os03t0579900-01	Rice	cytosol	3.0	14.22
Os03t0566700-01	Rice	cytosol, extracellular	2.0	11.34

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4334935	ProteinID:BAF13948.1	ProteinID:BAS87581.1
ProteinID:CAE03194.2	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlantsGene:Os04g0111900	EnsemblPlants:Os04t0111900-02	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR23155	PANTHER:PTHR23155:SF881	UniProt:Q7XQC5	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52540
UniParc:UPI000021C71B	RefSeq:XP_015636780.1	RefSeq:XP_015636782.1	SEG:seg	:	:

Description

resistance gene analog PIC22Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-01);Similar to Resistance gene analog PIC22 (Fragment). (Os04t0111900-02)

Coordinates

chr4:-:681115..687685

Molecular Weight (calculated)

123127.0 Da

IEP (calculated)

7.165

GRAVY (calculated)

0.036

Length

1099 amino acids

Sequence
(BLAST)

0001: MALPSRRWAG AVESGVDPVA EAWAKLLRSL SQAMARLRVQ MESFDDAQMR WALAAGVRAK AQLLASRLAQ ILALFWDEGQ RAALPACVRD ALYGMEDMVD
0101: DLEYHMLKFQ PHQQEVRCNL LISLVNLRYR LIISHASRSR FLKDLDFVAS EAGSLLSAMH KLEPTAPSLP ALLLADDDHQ VVFGRHKEVT DIVRILIDPP
0201: ASHHHHPTYD ILPIVGMGGV GKTTLAKLVY DDAKVKQHFE LRLWASVSTS GGFHKIDITE QILRSANPTY PASIHSEPTL DMLQFHLSQL VASKRFLLVL
0301: DDIREESFTS MACQEILSPL SSAEKGSRIL VTTTTASVPA MLGASCTYHL NVLDIEDLWS LLKKYAFHGG PTHDSTQELE EIGRNIASKL KGLPLAAKML
0401: GGLLGATKST KTWMNVLDKE LYGDSILPVL ELSYSYLPRR LKQCFSFCSL FPRNYKFNKR VLIQLWMAQG FVQSQNSADK NMEDLAEDYF EELLSRSFFD
0501: VRREACETHY VMHDLVHDLA QSVSADQCLR VEHGMISEKP STARYVSVTQ DGLQGLGSFC KPENLRTLIV LRSFIFSSSC FQDEFFRKIR NLRVLDLSCS
0601: NFVQLPNSIG ELVHLRYLSL PRTLNMLPES VSKLLHLESL CFHKCSLEKL PAGITMLVNL RHLNIATRFI AQVSGIGRLV NLQGSVEFHV KKGVGCTLEE
0701: LKGLKDLRGK LKIKGLDNVL SKEAASKAEL YKKRHLRELS LEWNSASRNL VLDADAIILE NLQPPSSLEV LNINRYQGAI CPSWLQLSSL KQLQSLDLIN
0801: CRNLEILPPL GLLPSLKYLC MKELCTVNQI GHEFYGDDDV PFPSLIMLVF DDFPSLFDWS GEVKGNPFPH LQKLTLIDCP NLVQVPPLPP SVSDVTMERT
0901: ALISYLRLAR LSSPRSDMLT LDVRNISILC WGLFHQLHLE SVISLKIEGR ETPFATKGLC SFTSLQRLQL CQFDLTDNTL SGTLYALPSL CSLEMIDLPN
1001: ITSLSVPSDI DFFPKLAELY ICNCLLFASL DSLHIFISLK RLVIERCPKL TAGSFPANFK NLTSLKVLSI SHCKDFQSFP VGSVPPSLEA LHLVGCHQS

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.