Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G030000.2 | Wheat | cytosol | 95.15 | 94.64 |
| TraesCS2B01G045400.1 | Wheat | cytosol, nucleus, plasma membrane | 74.87 | 74.6 |
| Os04t0111900-02 | Rice | cytosol, mitochondrion | 52.87 | 53.59 |
| TraesCS2B01G043300.1 | Wheat | cytosol | 28.99 | 50.23 |
| TraesCS2B01G044700.1 | Wheat | cytosol, nucleus, plastid | 45.15 | 44.87 |
| TraesCS2B01G042500.1 | Wheat | cytosol | 44.61 | 44.18 |
| TraesCS2B01G043700.1 | Wheat | cytosol | 38.33 | 42.96 |
| TraesCS2B01G045700.1 | Wheat | mitochondrion | 45.87 | 42.23 |
| TraesCS3B01G468200.1 | Wheat | cytosol | 40.31 | 39.59 |
| TraesCS1B01G269800.1 | Wheat | cytosol | 37.43 | 37.5 |
| TraesCS2B01G042700.1 | Wheat | endoplasmic reticulum, mitochondrion, plastid, vacuole | 21.54 | 37.27 |
| TraesCS3B01G364900.1 | Wheat | cytosol | 28.64 | 28.56 |
| TraesCS1B01G320500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.1 | 27.7 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 26.57 | 27.18 |
| TraesCS5B01G444200.1 | Wheat | cytosol | 28.19 | 26.72 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 22.08 | 26.42 |
| TraesCS7B01G299800.2 | Wheat | extracellular, plasma membrane | 29.89 | 25.46 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 26.21 | 25.3 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.53 | 22.64 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G044900.2 | EnsemblPlantsGene:TraesCS2B01G044900 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:21950585..21953929
Molecular Weight (calculated)
123823.0 Da
IEP (calculated)
8.327
GRAVY (calculated)
-0.076
Length
1114 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLVLEEALR AMARAVDQFR SLGDRQMRRC LLGAGDHVSG KLREVATLLD QIRDLVWADD ERSSPARRDR LKEAFYGIED LVGGMEYHSL TFQVESGISS
0101: KSNRNPLSSA IRLGKRFVSS SGSDEASRRR FLKDLDSVAS TLSSLLKQAQ GSGLPPTVPV PDFDAATMLQ GGHKVFGRNK ELNDIVQMLT EPPSPHCTAC
0201: RVVSIVGLGG LGKTTLAQSV YDDTRVKSHF DLRAWAHVSG KPDKMELAKQ ILRSANPRYG GSIDKDATFA TLQLKLNRLM SSRRFLIVLD DIWGDDPFTN
0301: DAYNEILSPL RSMESGSRII AVTRTPKVAD MLDASHTYFL NALGTDDCWS LIKESAFGGR STHEECTEEL EQIGMKIAAK LNGLPLAAKL MGGLLGATKS
0401: TKYWRIISEK EFSRDITLSL LRLSYSYLPG RLKQCFAFCS IFPKNWKFDQ TTLVRLWMAN GFIQPQSGTG KRMEDLGTDY FNVLLSRSFF HALRQGRRTH
0501: YKMHDLIHDM AVSASTEDCC QIEPGMTRRI PSTVRHVSVT TGSLQDVNAA INILPKNLRT VIVFGNWTHF LEDDSLVKLK NLRALDVCHC DFTELPPAIS
0601: CLFHLRYLSL SRTIRSLPES ISKLLHLQTL CFEDKCSLDK LPAGISRLVK LRHLGIDMKY IAQLPGIGRL INLQGSVEFR VKKGGGHALQ ELKGIKCLHG
0701: QLKIKGLDNV LSKDEASKTD MKSKENLRAL TLEWSSACRI LTPVADCEVL ENLQPHQNLK ELSIVRYLGV TSPSWLQLAL LRELQSLHLV NCRSLGVLPA
0801: LGLLPSLEQL HMKELCTVER IGHEFYGTGD MAFPSLKVLV LDDFPSLVEW SEVRENPLPC LQRLKIVDCP KLIQVPAFPP SVSELTVERT LLISNMKLAP
0901: YSSSRSEILT LDISTTSVLS RGLFHQSHLA SIIVLNINAG CKHLVAAEGL HTFTSLQKLQ LCHSDISDQN LESLLQVLPS LYSFEMIDLP NMTSLVPANN
1001: SLCTTVTELQ ISNCPLLSSV VSLTTFVSLK RLVIEKCPKL TAASFPVNFW RLTALKVLSI SYCTEFQSLP TCGLPTSIEA LHLVGCHPKL HGNSSNKTVN
1101: SQEEVSTLHK TLAH
0101: KSNRNPLSSA IRLGKRFVSS SGSDEASRRR FLKDLDSVAS TLSSLLKQAQ GSGLPPTVPV PDFDAATMLQ GGHKVFGRNK ELNDIVQMLT EPPSPHCTAC
0201: RVVSIVGLGG LGKTTLAQSV YDDTRVKSHF DLRAWAHVSG KPDKMELAKQ ILRSANPRYG GSIDKDATFA TLQLKLNRLM SSRRFLIVLD DIWGDDPFTN
0301: DAYNEILSPL RSMESGSRII AVTRTPKVAD MLDASHTYFL NALGTDDCWS LIKESAFGGR STHEECTEEL EQIGMKIAAK LNGLPLAAKL MGGLLGATKS
0401: TKYWRIISEK EFSRDITLSL LRLSYSYLPG RLKQCFAFCS IFPKNWKFDQ TTLVRLWMAN GFIQPQSGTG KRMEDLGTDY FNVLLSRSFF HALRQGRRTH
0501: YKMHDLIHDM AVSASTEDCC QIEPGMTRRI PSTVRHVSVT TGSLQDVNAA INILPKNLRT VIVFGNWTHF LEDDSLVKLK NLRALDVCHC DFTELPPAIS
0601: CLFHLRYLSL SRTIRSLPES ISKLLHLQTL CFEDKCSLDK LPAGISRLVK LRHLGIDMKY IAQLPGIGRL INLQGSVEFR VKKGGGHALQ ELKGIKCLHG
0701: QLKIKGLDNV LSKDEASKTD MKSKENLRAL TLEWSSACRI LTPVADCEVL ENLQPHQNLK ELSIVRYLGV TSPSWLQLAL LRELQSLHLV NCRSLGVLPA
0801: LGLLPSLEQL HMKELCTVER IGHEFYGTGD MAFPSLKVLV LDDFPSLVEW SEVRENPLPC LQRLKIVDCP KLIQVPAFPP SVSELTVERT LLISNMKLAP
0901: YSSSRSEILT LDISTTSVLS RGLFHQSHLA SIIVLNINAG CKHLVAAEGL HTFTSLQKLQ LCHSDISDQN LESLLQVLPS LYSFEMIDLP NMTSLVPANN
1001: SLCTTVTELQ ISNCPLLSSV VSLTTFVSLK RLVIEKCPKL TAASFPVNFW RLTALKVLSI SYCTEFQSLP TCGLPTSIEA LHLVGCHPKL HGNSSNKTVN
1101: SQEEVSTLHK TLAH
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.