Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G044900.2 | Wheat | cytosol | 94.64 | 95.15 |
| TraesCS2A01G029800.1 | Wheat | cytosol | 74.91 | 75.11 |
| Os04t0111900-02 | Rice | cytosol, mitochondrion | 52.59 | 53.59 |
| TraesCS2A01G029600.1 | Wheat | cytosol | 29.29 | 50.85 |
| TraesCS2A01G030200.1 | Wheat | cytosol | 42.41 | 50.26 |
| TraesCS2A01G031000.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 45.18 | 45.46 |
| TraesCS3A01G432200.1 | Wheat | cytosol, mitochondrion | 40.18 | 39.65 |
| TraesCS2A01G031400.1 | Wheat | plastid | 43.12 | 39.3 |
| TraesCS1A01G259500.3 | Wheat | cytosol | 36.79 | 37.12 |
| TraesCS5A01G440600.1 | Wheat | cytosol | 17.32 | 29.62 |
| TraesCS7A01G399600.1 | Wheat | plastid | 18.57 | 29.38 |
| TraesCS7A01G399400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.5 | 29.3 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 23.84 | 29.18 |
| TraesCS3A01G333900.1 | Wheat | cytosol, plastid | 29.11 | 27.72 |
| TraesCS1A01G309500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 27.5 | 27.26 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 21.79 | 26.21 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 26.16 | 25.39 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.45 | 22.64 |
| TraesCS7A01G399300.1 | Wheat | cytosol | 10.98 | 22.45 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G030000.2 | EnsemblPlantsGene:TraesCS2A01G030000 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52047 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:13811892..13815254
Molecular Weight (calculated)
123928.0 Da
IEP (calculated)
8.370
GRAVY (calculated)
-0.083
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDLVLEEALR ALARAVDQFR SLGERQMRRC LLGAGAGDHV SGKLREVATQ LDQVRGLLWA DDDRSSPARM GRVKEALYGI EDLVDDMEYH SLTFQVESSI
0101: SSKSNRNPLS SALRLGKRFV SGGGGGGGDE ASRRRFLKDL DSVASTLSSL LKQAQGSGLP PAAPVPDFDA STLLQAGQKV FGRNKELNDI VQMLTEQPSP
0201: HCTACKVVSI VGFGGLGKTT LAQSVYDDLR VKSHFDLRAW AHVSGKPDKV ELAKQILRSA NPRYGGSIDK DATFPTLQLK LNRFMSSKRF LIVLDDIWGD
0301: DPFTNDAYNE ILSPLRSMES GSRIIAVTRT PKVADMLDAS HTYYLNALGT DDCWSLIKES ALGGWSTHEE STQELEQIGR KIAAKLNGLP LAAKLMGGLL
0401: GATKSTKYWR IISEKEFSGD ITLSLLRLSY SYLPGRLKQC FAFCSIFPKN WKFDQTNLVR LWMANGFIQP QSGTGKRMED LGTDYFNLLL SRSFFHALRQ
0501: GRRTHYKMHD LIHDMAVSAS TEDCCQIEPG MTRRIPSTVR HVSVTTGSLQ DVNAAINILP KNLRTIIVFG NWPHFLEDDS LGKLKNLRAL DVCHCDFTEL
0601: PPAISCLFHL RYLSLSRTIR SLPESISKLL HLQTLCFEDK CSLDKLPAGI SRLVKLRHLG INMKYIAQLP GIGRLINLQG SVEFRVKKGG GHALQELKGI
0701: KGLHGQLKIK GLDNVLSKDE ASKTDMKSKE NLRALTLEWS SACRILTPVA DCEVLENLQP HQNLKELSIL RYLGVTSPSW LQMALLRELQ SLHLVNCRSL
0801: GVLPALGLLP SLEQLHMKEL CTVERIGHEF YGTGGMAFPS LKVLVLEDFP SLVEWSEVRE NPLPCLQRLK IVDCPKLIQV PAFPPSVSEL TVERTLLISN
0901: MKLAPYSSSQ SEILTLDIST TSVLSRGLFH QSHLASIIVL NINAGCKHLV AAEGLHTFTS LQKLQLCHSD ISDQNLESLL QVLPSLYSFE MIDLPNMTSL
1001: LVPANNSLCT TVTELQISNC PLLSCVVSLG TFVSLKRLVI EKCPKLTAAS FPVNFWRLTA LKVLSISYCT EFQSLPTHGL PTSIEALHLV GCHPKLHGNS
1101: SNKTVNSQEE VSTLHKTLAH
0101: SSKSNRNPLS SALRLGKRFV SGGGGGGGDE ASRRRFLKDL DSVASTLSSL LKQAQGSGLP PAAPVPDFDA STLLQAGQKV FGRNKELNDI VQMLTEQPSP
0201: HCTACKVVSI VGFGGLGKTT LAQSVYDDLR VKSHFDLRAW AHVSGKPDKV ELAKQILRSA NPRYGGSIDK DATFPTLQLK LNRFMSSKRF LIVLDDIWGD
0301: DPFTNDAYNE ILSPLRSMES GSRIIAVTRT PKVADMLDAS HTYYLNALGT DDCWSLIKES ALGGWSTHEE STQELEQIGR KIAAKLNGLP LAAKLMGGLL
0401: GATKSTKYWR IISEKEFSGD ITLSLLRLSY SYLPGRLKQC FAFCSIFPKN WKFDQTNLVR LWMANGFIQP QSGTGKRMED LGTDYFNLLL SRSFFHALRQ
0501: GRRTHYKMHD LIHDMAVSAS TEDCCQIEPG MTRRIPSTVR HVSVTTGSLQ DVNAAINILP KNLRTIIVFG NWPHFLEDDS LGKLKNLRAL DVCHCDFTEL
0601: PPAISCLFHL RYLSLSRTIR SLPESISKLL HLQTLCFEDK CSLDKLPAGI SRLVKLRHLG INMKYIAQLP GIGRLINLQG SVEFRVKKGG GHALQELKGI
0701: KGLHGQLKIK GLDNVLSKDE ASKTDMKSKE NLRALTLEWS SACRILTPVA DCEVLENLQP HQNLKELSIL RYLGVTSPSW LQMALLRELQ SLHLVNCRSL
0801: GVLPALGLLP SLEQLHMKEL CTVERIGHEF YGTGGMAFPS LKVLVLEDFP SLVEWSEVRE NPLPCLQRLK IVDCPKLIQV PAFPPSVSEL TVERTLLISN
0901: MKLAPYSSSQ SEILTLDIST TSVLSRGLFH QSHLASIIVL NINAGCKHLV AAEGLHTFTS LQKLQLCHSD ISDQNLESLL QVLPSLYSFE MIDLPNMTSL
1001: LVPANNSLCT TVTELQISNC PLLSCVVSLG TFVSLKRLVI EKCPKLTAAS FPVNFWRLTA LKVLSISYCT EFQSLPTHGL PTSIEALHLV GCHPKLHGNS
1101: SNKTVNSQEE VSTLHKTLAH
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.