Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G030200.1 | Wheat | cytosol | 71.43 | 84.13 |
| TraesCS2B01G045700.1 | Wheat | mitochondrion | 82.66 | 76.03 |
| TraesCS2A01G029600.1 | Wheat | cytosol | 42.14 | 72.71 |
| TraesCS2A01G031400.1 | Wheat | plastid | 71.88 | 65.09 |
| TraesCS2A01G029800.1 | Wheat | cytosol | 46.36 | 46.2 |
| TraesCS2A01G030000.2 | Wheat | cytosol | 45.46 | 45.18 |
| TraesCS1A01G259500.3 | Wheat | cytosol | 36.66 | 36.76 |
| TraesCS3A01G432200.1 | Wheat | cytosol, mitochondrion | 36.84 | 36.12 |
| TraesCS7A01G399400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.15 | 30.19 |
| TraesCS5A01G440600.1 | Wheat | cytosol | 17.7 | 30.08 |
| TraesCS7A01G399600.1 | Wheat | plastid | 18.15 | 28.53 |
| TraesCS3A01G333900.1 | Wheat | cytosol, plastid | 29.47 | 27.89 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 22.82 | 27.76 |
| TraesCS1A01G309500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.03 | 27.61 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 22.28 | 26.64 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 26.5 | 25.56 |
| TraesCS7A01G399300.1 | Wheat | cytosol | 11.14 | 22.63 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.27 | 22.25 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G031000.2 | EnsemblPlantsGene:TraesCS2A01G031000 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| ncoils:Coil | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:14299384..14302725
Molecular Weight (calculated)
123568.0 Da
IEP (calculated)
8.178
GRAVY (calculated)
-0.112
Length
1113 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKPMEAAACS GGLDPAALAE APRLLRSASR AMEGLASDIQ SCGGSRRRCA PGASKCGGKA AAPTLELLVA YLLQIWGISA AAGYKALALQ ARDAFYFAQD
0101: LQDTIDCHNP PRVRSRRQSK PLPALRWCAS NCLPFGIVAS KPPKKIIKDI KAVNQETQKI VDLLDKAAAG SSSASLPPRM PDSGREILQT RVFVGRDKEK
0201: DDIVQLLIQP CAKSAVISVV GAGGIGKTTL ARTVFNDAAV GEHFDVKCWV SVSSSSNKME LAAQILRSVK PAWDGSADKM VDFQMLQSEL RRSLTSKRYL
0301: IVLDDVWNSK DETWLDMLTP LQSADIGSRI MATSRMNTVP HILGASQMYT VNPLNSDDCW ALLKEHAFPS DLGNVYPNLH QIGKQIAEKI NGSPLAAKLV
0401: GGLLGDTRSE IHWMNIMETG LKDNNVSSAL RLSYKYLPVH LKRCFAYCSL FAKDHKFDPA HLSRLWIAEG FVQPQGTADK RMEDIAREYF DQLLSRSFFQ
0501: EIKLGTKTYY LVHGLLHDLA RSVAAEDCFH VDDGMNCDIP STVRHLSVTM DSLPRLTSFC SLKELRTLLI RPSLPSNSSC SQEDFSVNLK SILENSKQLR
0601: VLDVNCFNSN ELPQCIDDLL HLRYLSIHGS IQRLPESIGK LLNLQVLCFT GKCSFDKLPE SVTMLVNLRH LLVVTKCTAG LAGIGRLAKL QGSLEFHIEK
0701: KEGHRSEELR NINGLRGSLK VKGLDNVSSY EEACKAELNK KTHLNSLNLE WSSASRNNPP PADEEVLEGL KPHQDIKVLH IRRYCGTKAP SWLQSLQQVR
0801: SLHLINCRSL GILPPLGNLG SLRYLHMKEL CAVDRIGHEF YGNGDVAFPS LSVLEFDDFP KLREWARIED KNSFPCLERL IIVDCPQLVE IPPFSATTRE
0901: VTIERTGFMP YMRLAPFSSS SEKLQLDVCT TSVHFNGLFH KQHIEALVAL NISGAEQVVA TEEIGLLVSL QRLQLSRCNF TDQNFSSFLQ ALPHLSLLEM
1001: IDLPNVTSLP ASETLSFSTM LTELSVRNCQ FLHSLSSLQF FYSLKVLVIE RCPKVTTTSF PLKFRSLSSL RVLRISYCPE LQSLPVCGLP SSLETLDIIG
1101: CHPELSKPRK RVQ
0101: LQDTIDCHNP PRVRSRRQSK PLPALRWCAS NCLPFGIVAS KPPKKIIKDI KAVNQETQKI VDLLDKAAAG SSSASLPPRM PDSGREILQT RVFVGRDKEK
0201: DDIVQLLIQP CAKSAVISVV GAGGIGKTTL ARTVFNDAAV GEHFDVKCWV SVSSSSNKME LAAQILRSVK PAWDGSADKM VDFQMLQSEL RRSLTSKRYL
0301: IVLDDVWNSK DETWLDMLTP LQSADIGSRI MATSRMNTVP HILGASQMYT VNPLNSDDCW ALLKEHAFPS DLGNVYPNLH QIGKQIAEKI NGSPLAAKLV
0401: GGLLGDTRSE IHWMNIMETG LKDNNVSSAL RLSYKYLPVH LKRCFAYCSL FAKDHKFDPA HLSRLWIAEG FVQPQGTADK RMEDIAREYF DQLLSRSFFQ
0501: EIKLGTKTYY LVHGLLHDLA RSVAAEDCFH VDDGMNCDIP STVRHLSVTM DSLPRLTSFC SLKELRTLLI RPSLPSNSSC SQEDFSVNLK SILENSKQLR
0601: VLDVNCFNSN ELPQCIDDLL HLRYLSIHGS IQRLPESIGK LLNLQVLCFT GKCSFDKLPE SVTMLVNLRH LLVVTKCTAG LAGIGRLAKL QGSLEFHIEK
0701: KEGHRSEELR NINGLRGSLK VKGLDNVSSY EEACKAELNK KTHLNSLNLE WSSASRNNPP PADEEVLEGL KPHQDIKVLH IRRYCGTKAP SWLQSLQQVR
0801: SLHLINCRSL GILPPLGNLG SLRYLHMKEL CAVDRIGHEF YGNGDVAFPS LSVLEFDDFP KLREWARIED KNSFPCLERL IIVDCPQLVE IPPFSATTRE
0901: VTIERTGFMP YMRLAPFSSS SEKLQLDVCT TSVHFNGLFH KQHIEALVAL NISGAEQVVA TEEIGLLVSL QRLQLSRCNF TDQNFSSFLQ ALPHLSLLEM
1001: IDLPNVTSLP ASETLSFSTM LTELSVRNCQ FLHSLSSLQF FYSLKVLVIE RCPKVTTTSF PLKFRSLSSL RVLRISYCPE LQSLPVCGLP SSLETLDIIG
1101: CHPELSKPRK RVQ
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.