Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 1
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G399400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.28 | 79.67 |
| TraesCS7B01G299800.2 | Wheat | extracellular, plasma membrane | 77.12 | 41.74 |
| TraesCS5A01G440600.1 | Wheat | cytosol | 33.76 | 36.49 |
| Zm00001d045335_P003 | Maize | mitochondrion, nucleus | 51.27 | 27.29 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 27.12 | 20.98 |
| TraesCS1A01G259500.3 | Wheat | cytosol | 32.06 | 20.45 |
| TraesCS3A01G432200.1 | Wheat | cytosol, mitochondrion | 31.78 | 19.82 |
| TraesCS2A01G029800.1 | Wheat | cytosol | 29.38 | 18.62 |
| TraesCS2A01G030000.2 | Wheat | cytosol | 29.38 | 18.57 |
| TraesCS2A01G030200.1 | Wheat | cytosol | 24.72 | 18.52 |
| TraesCS1A01G309500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 29.1 | 18.23 |
| TraesCS2A01G031000.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 28.53 | 18.15 |
| TraesCS3A01G333900.1 | Wheat | cytosol, plastid | 27.97 | 16.84 |
| TraesCS2A01G031400.1 | Wheat | plastid | 29.1 | 16.76 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 26.98 | 16.55 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 18.08 | 13.75 |
| TraesCS2A01G029600.1 | Wheat | cytosol | 10.45 | 11.47 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 7.77 | 7.2 |
| TraesCS7A01G399300.1 | Wheat | cytosol | 0.71 | 0.91 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G399600.1 | EnsemblPlantsGene:TraesCS7A01G399600 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF880 | PFAM:PF00931 | PRINTS:PR00364 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:579495651..579497777
Molecular Weight (calculated)
81159.6 Da
IEP (calculated)
7.906
GRAVY (calculated)
-0.203
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MATLSAASAV GWVLSPVITR MVSLVQSYLS SQYKWKSEMV SDLNNLKATL MDIFIVVSAA ERQRVVDTNQ ILLLQQMKDA VSDADDVLDE FDYMLLKEKA
101: QKDLLSRIAT SSLSIGKRLV NVDKFRSELR KVLKSLERVR TSAEIFVRVM TLESDKPIQS LRYVPTRTTG SFLHEDVIFG REKEIPELVG QLVYKSDECS
201: LNNEQNFRTE VLGVGGIGKT TLAQLVYKDE RIVDSFDVRM WVSVSGNFDK TRVIKEIIAS TTDGESAELA NFNFSRLQSE LQWRLRSKRF LLVLDDVWYD
301: EKHGEHINKQ MWMEIIAPIK ESSVISGSKV LVTTRTELVA KMLDSRSLFT LQGLEGDDSW LLFRRCAFGS SKPEGYPELK QLGYQIVQKL KGSPLALKVI
401: GGHLNGKYSD AEWEDVLHKD VLNPNDILTT LHFSYENLPE HLQQCFVYCS LFPKGYRIDS NRLIWMWIAQ GLVHLEGYNS RSLEDIGRSY FNDLLVRSFF
501: QKLCCGDQTY YTMHDSMNDL ALHVSHGECF RIDHGSIGVL PYHIRHLSVS AEQFGDLVNY DGLGRLRTFI VLNDSWFCSK DYLSHDILEK LKSVRVLDLT
601: GCCFGNLPKA VSDLRHLRYI AIRRTYYPLP TTISRLNHLQ SLFVQYHSCY PVKISCSNNR KHLKYSSRNA TGRYFSLPES ISRLINLEHV DVEKAYTHII
701: RYTSASVH
101: QKDLLSRIAT SSLSIGKRLV NVDKFRSELR KVLKSLERVR TSAEIFVRVM TLESDKPIQS LRYVPTRTTG SFLHEDVIFG REKEIPELVG QLVYKSDECS
201: LNNEQNFRTE VLGVGGIGKT TLAQLVYKDE RIVDSFDVRM WVSVSGNFDK TRVIKEIIAS TTDGESAELA NFNFSRLQSE LQWRLRSKRF LLVLDDVWYD
301: EKHGEHINKQ MWMEIIAPIK ESSVISGSKV LVTTRTELVA KMLDSRSLFT LQGLEGDDSW LLFRRCAFGS SKPEGYPELK QLGYQIVQKL KGSPLALKVI
401: GGHLNGKYSD AEWEDVLHKD VLNPNDILTT LHFSYENLPE HLQQCFVYCS LFPKGYRIDS NRLIWMWIAQ GLVHLEGYNS RSLEDIGRSY FNDLLVRSFF
501: QKLCCGDQTY YTMHDSMNDL ALHVSHGECF RIDHGSIGVL PYHIRHLSVS AEQFGDLVNY DGLGRLRTFI VLNDSWFCSK DYLSHDILEK LKSVRVLDLT
601: GCCFGNLPKA VSDLRHLRYI AIRRTYYPLP TTISRLNHLQ SLFVQYHSCY PVKISCSNNR KHLKYSSRNA TGRYFSLPES ISRLINLEHV DVEKAYTHII
701: RYTSASVH
001: MELVSFGVEK LWDRLSQEYD QFKGVEDQVT ELKSNLNLLK SFLKDADAKK HISEMVRHCV EEIKDIVYDT EDIIETFILK EKVEMKRGIM KRIKRFASTI
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
101: MDRRELASDI GGISKRISKV IQDMQSFGVQ QIITDGSRSS HPLQERQREM RHTFSRDSEN DFVGMEANVK KLVGYLVEKD DYQIVSLTGM GGLGKTTLAR
201: QVFNHDVVKD RFDGFAWVSV SQEFTRISVW QTILQNLTSK ERKDEIQNMK EADLHDDLFR LLESSKTLIV LDDIWKEEDW DLIKPIFPPK KGWKVLLTSR
301: TESIAMRGDT TYISFKPKCL SIPDSWTLFQ SIAMPRKDTS EFKVDEEMEN MGKKMIKHCG GLSLAVKVLG GLLAAKYTLH DWKRLSENIG SHIVERTSGN
401: NSSIDHVLSV SFEELPNYLK HCFLYLAHFP EDHEIDVEKL HYYWAAEGIS ERRRYDGETI RDTGDSYIEE LVRRNMVISE RDVMTSRFET CRLHDMMREI
501: CLFKAKEENF LQIVSNHSPT SNPQTLGASR RFVLHNPTTL HVERYKNNPK LRSLVVVYDD IGNRRWMLSG SIFTRVKLLR VLDLVQAKFK GGKLPSDIGK
601: LIHLRYLSLK DAKVSHLPSS LRNLVLLIYL DIRTDFTDIF VPNVFMGMRE LRYLELPRFM HEKTKLELSN LEKLEALENF STKSSSLEDL RGMVRLRTLV
701: IILSEGTSLQ TLSASVCGLR HLENFKIMEN AGVNRMGEER MVLDFTYLKK LTLSIEMPRL PKIQHLPSHL TVLDLSYCCL EEDPMPILEK LLELKDLSLD
801: YLSFSGRKMV CSAGGFPQLR KLALDEQEEW EEWIVEEGSM SRLHTLSIWS STLKELPDGL RFIYSLKNLI MGKSWMERLS ERGEEFYKVQ NIPFIKFSS
Arabidopsis Description
RXW24LProbable disease resistance protein RXW24L [Source:UniProtKB/Swiss-Prot;Acc:Q9C646]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.