Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G044700.1 | Wheat | cytosol, nucleus, plastid | 63.04 | 36.22 |
| TraesCS2B01G045700.1 | Wheat | mitochondrion | 67.7 | 36.03 |
| TraesCS2B01G042500.1 | Wheat | cytosol | 62.58 | 35.82 |
| TraesCS2B01G043700.1 | Wheat | cytosol | 47.2 | 30.58 |
| TraesCS2A01G029600.1 | Wheat | cytosol | 23.29 | 23.26 |
| TraesCS2B01G044900.2 | Wheat | cytosol | 37.27 | 21.54 |
| TraesCS2B01G045400.1 | Wheat | cytosol, nucleus, plasma membrane | 37.27 | 21.47 |
| TraesCS2B01G043300.1 | Wheat | cytosol | 19.1 | 19.13 |
| TraesCS3B01G468200.1 | Wheat | cytosol | 32.45 | 18.43 |
| TraesCS1B01G269800.1 | Wheat | cytosol | 30.59 | 17.72 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 28.88 | 17.08 |
| TraesCS3B01G364900.1 | Wheat | cytosol | 29.19 | 16.83 |
| TraesCS1B01G320500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.57 | 16.28 |
| TraesCS7B01G299800.2 | Wheat | extracellular, plasma membrane | 30.12 | 14.83 |
| TraesCS5B01G444200.1 | Wheat | cytosol | 26.09 | 14.3 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 25.0 | 13.95 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 19.72 | 13.64 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 9.16 | 7.72 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G042700.1 | EnsemblPlantsGene:TraesCS2B01G042700 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:19440544..19445491
Molecular Weight (calculated)
71795.5 Da
IEP (calculated)
7.785
GRAVY (calculated)
-0.077
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTRRCELGQ VLLGIHCGGL LLARQEQQQP SSELGGGTTQ HTPESNLASG CKPSISMEED GGLDAASLAE ALQLVLSAFR AMEGLAAQIH SCHRTRRKWE
101: LRRCRSKVAD PDLDLLIAHL LQIWSICAGA YPQRAGDKAL ALQARDAVHF MEALQDKLQY GSASNSPMPD SGRQVIQTGV FVGRHKERDD VVHMLIKPCA
201: KVTAPDMMVS IVGTAGIGKT TLTQMVFNDT RVAKHFEVRC WVSVSTGSNT MELTAEILRS AQPPWDISVD KMVDFQMIQS ELRRLVTSKR YLIVIDDVCN
301: GMDEIWLDMM PPLQSADIGS RILATSRINT VPHFLGASQL YPVNPLSSDD CWAMLKEHAF PSGRENAYPD LHPIGKQIAV KINGSPLAAK LVGVLLGDTR
401: TKNHWMKIMK TGLQDNAVLP ALRLSYKYLP VHLKRCFAYC SLFPQNYKFD PAHLSRLWIA EGFVQPQGTA DKRMEDIARE YFGLLLSRSF FQEIKLGSRT
501: YYLMHDLLHD LAKSVAAEDC FHIEDGMNCD IPSTVRHLSV TVKSLIGLTS FPGLEELRTL LIRPSLLSSS SCLQEDFSLN LENILLKCKH LRVLDLSGYN
601: SKELPHCIYD LLHLRYLSIN ATIQKLPELI GKLLHLQTLC ITGK
101: LRRCRSKVAD PDLDLLIAHL LQIWSICAGA YPQRAGDKAL ALQARDAVHF MEALQDKLQY GSASNSPMPD SGRQVIQTGV FVGRHKERDD VVHMLIKPCA
201: KVTAPDMMVS IVGTAGIGKT TLTQMVFNDT RVAKHFEVRC WVSVSTGSNT MELTAEILRS AQPPWDISVD KMVDFQMIQS ELRRLVTSKR YLIVIDDVCN
301: GMDEIWLDMM PPLQSADIGS RILATSRINT VPHFLGASQL YPVNPLSSDD CWAMLKEHAF PSGRENAYPD LHPIGKQIAV KINGSPLAAK LVGVLLGDTR
401: TKNHWMKIMK TGLQDNAVLP ALRLSYKYLP VHLKRCFAYC SLFPQNYKFD PAHLSRLWIA EGFVQPQGTA DKRMEDIARE YFGLLLSRSF FQEIKLGSRT
501: YYLMHDLLHD LAKSVAAEDC FHIEDGMNCD IPSTVRHLSV TVKSLIGLTS FPGLEELRTL LIRPSLLSSS SCLQEDFSLN LENILLKCKH LRVLDLSGYN
601: SKELPHCIYD LLHLRYLSIN ATIQKLPELI GKLLHLQTLC ITGK
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.