Factsheet for Os05t0492600-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0492200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.07	43.06
GSMUA_Achr10P...	Banana	extracellular	57.01	35.52
GSMUA_Achr7P21400_001	Banana	extracellular	55.41	32.07
Os05t0414200-01	Rice	cytosol	21.5	31.54
Os05t0414300-02	Rice	cytosol	29.62	28.75
Os07t0273900-01	Rice	cytosol	31.85	27.7
Os04t0512900-01	Rice	nucleus	32.01	26.76
Os07t0273600-01	Rice	mitochondrion	18.15	26.15
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	33.12	20.21
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	35.19	19.15
Os04t0111900-02	Rice	cytosol, mitochondrion	32.8	18.74
Os01t0308300-00	Rice	plastid	32.17	18.7
Os03t0324600-01	Rice	cytosol	31.69	18.55
Os04t0112100-01	Rice	cytosol, plastid	9.39	17.4
Os06t0619000-01	Rice	cytosol	30.41	16.31
Os03t0579200-00	Rice	cytosol	32.01	16.13
VIT_15s0024g00440.t01	Wine grape	cytosol	22.77	15.36
Os06t0667900-00	Rice	plasma membrane	22.13	11.82
VIT_15s0024g00450.t01	Wine grape	cytosol	9.71	7.98
Os03t0566700-01	Rice	cytosol, extracellular	0.64	2.06
Os01t0178900-01	Rice	cytosol	0.48	0.57
Os03t0579900-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4339181	ProteinID:BAF17829.1	ProteinID:BAS94675.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
EnsemblPlantsGene:Os05g0492600	EnsemblPlants:Os05t0492600-00	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155
PANTHER:PTHR23155:SF520	UniProt:Q0DH44	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0000E12552	RefSeq:XP_015640206.1

Description

YR48Similar to NBS-LRR type resistance protein (Fragment). (Os05t0492600-00)

Coordinates

chr5:+:24197060..24200694

Molecular Weight (calculated)

71777.6 Da

IEP (calculated)

8.126

GRAVY (calculated)

-0.298

Length

628 amino acids

Sequence
(BLAST)

001: MPIGEAVLSA FMQALFEKAV AAASSELKFP QNIAVELQNL SSSLSTILAH VEDAEERQLK DQAARSWLSR LKDVAYEMDD LLDEHAAEVL RSKLAGPSNY
101: HHLKVRICFC CIWLKNGLFN RDLVKQIMRI EGKIDRLIKD RHIVDPIMRF NREEIRERPK TSSLIDDSSV YGREEDKEVI VNMLLTTNNS NHVNLSILPI
201: VGMGGVGKTT LTQLVYNDVR VKKHFQLRMW LCVSENFDEA KLTKETIESV ASGLSSATTN MNLLQEDLSN KLKGKRFLLV LDDVWNEDPD RWDRYRCALV
301: AGAKGSKIMV TTRNENVGKL VGGLTPYYLK QLSYNDCWHL FRSYAFADGD SSAHPNLEMI GKEIVHKLKG LPLAARALGS LLCAKDNEDD WKNILESEIW
401: ELPSDKNNIL PALRLSYNHL PPILKRCFAF CSVFHKDYVF EKDILVQIWM AVGYIQPQGR RRMEEIGNNY FDELLSRSFF QKHKDGYVMH DAMHDLAQSV
501: SIDECMRLDN LPNNSTTERN ARHLSFSCDN KSQTTFEAFR GFNRARSLLL LNGYKSKTSS IPSDLFLNLR YLHVLDLNRQ EITELPESVG KLKMLRYLNL
601: SGTVVRKLPS SIGKLYCLQT LKLRNCLA

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.