Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0273600-01 | Rice | mitochondrion | 19.17 | 14.91 |
| Os05t0414200-01 | Rice | cytosol | 17.4 | 13.79 |
| Os05t0414300-02 | Rice | cytosol | 24.19 | 12.67 |
| Os07t0273900-01 | Rice | cytosol | 20.35 | 9.56 |
| Os05t0492600-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.4 | 9.39 |
| Os04t0512900-01 | Rice | nucleus | 17.11 | 7.72 |
| Os06t0619000-01 | Rice | cytosol | 24.19 | 7.0 |
| Os09t0314200-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 19.76 | 6.51 |
| Os04t0111900-02 | Rice | cytosol, mitochondrion | 18.58 | 5.73 |
| Os01t0308300-00 | Rice | plastid | 17.7 | 5.56 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 18.58 | 5.46 |
| Os03t0579200-00 | Rice | cytosol | 19.17 | 5.22 |
| Os03t0324600-01 | Rice | cytosol | 16.22 | 5.13 |
| Os05t0492200-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 16.81 | 5.07 |
| Os06t0667900-00 | Rice | plasma membrane | 9.14 | 2.64 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 5.31 | 1.93 |
| Os01t0178900-01 | Rice | cytosol | 0.0 | 0.0 |
| Os03t0579900-01 | Rice | cytosol | 0.0 | 0.0 |
| Os03t0566700-01 | Rice | cytosol, extracellular | 0.0 | 0.0 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.2 | EntrezGene:4334937 | EMBL:AK243014 | ProteinID:BAF13949.2 | ProteinID:BAS87582.1 |
| ProteinID:CAE03195.2 | ProteinID:EAZ29475.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 |
| InterPro:NB-ARC | EnsemblPlantsGene:Os04g0112100 | EnsemblPlants:Os04t0112100-01 | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR44851 | PANTHER:PTHR44851:SF2 | UniProt:Q7XQC4 | SUPFAM:SSF52540 | UniParc:UPI000021C71C | RefSeq:XP_015633767.1 |
| RefSeq:XP_015633768.1 | SEG:seg | : | : | : | : |
Description
NB-ARC domain containing protein. (Os04t0112100-01)
Coordinates
chr4:-:692896..695278
Molecular Weight (calculated)
37357.2 Da
IEP (calculated)
6.612
GRAVY (calculated)
-0.449
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIGAISTVG PAISPGIKIA EIAESFVARK YRRLRDYRKD VAQLVGEVGK IAVAVDTVEE QEQFMSDRRI VGQLSELMDA IHEAEDILDA VDYRDSIWAR
101: KHKVRQVIHS IVEQAKRIVG IDGALNRLDK SMNDLPRMQQ NQRDLVQLSN FRSSQGGGDG GASASRPRSA TGLLPDGKLY GYKEEYDRLV SALLYDPPRR
201: PGGNGNGGGQ VVAVVGDGGV GKTALAQHAL RHVDVQARFD HVIWASVPHK YRNKDLLAEI WMSGPGATAT AATHRCADQM SFGALQAEFV RLVSLSSQRY
301: LLVLDDVCND ESDDDDHQRS RKEWEDVLAP FKQGERGNT
101: KHKVRQVIHS IVEQAKRIVG IDGALNRLDK SMNDLPRMQQ NQRDLVQLSN FRSSQGGGDG GASASRPRSA TGLLPDGKLY GYKEEYDRLV SALLYDPPRR
201: PGGNGNGGGQ VVAVVGDGGV GKTALAQHAL RHVDVQARFD HVIWASVPHK YRNKDLLAEI WMSGPGATAT AATHRCADQM SFGALQAEFV RLVSLSSQRY
301: LLVLDDVCND ESDDDDHQRS RKEWEDVLAP FKQGERGNT
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.