Factsheet for Zm00001d010266_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78013	Sorghum	cytosol, mitochondrion, nucleus, plastid	80.52	80.76
Os05t0414300-02	Rice	cytosol	61.19	62.13
TraesCS3D01G425500.1	Wheat	cytosol	37.75	21.87
TraesCS3B01G468200.1	Wheat	cytosol	37.14	21.52
TraesCS3A01G432200.1	Wheat	cytosol, mitochondrion	37.14	21.5
HORVU3Hr1G094660.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.68	21.33
Zm00001d010269_P001	Maize	plastid	34.86	20.61
Zm00001d013822_P001	Maize	endoplasmic reticulum	20.55	18.93
Zm00001d019356_P001	Maize	cytosol	25.57	17.52
Zm00001d038548_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.22	16.8
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	26.03	14.82
Zm00001d045335_P003	Maize	mitochondrion, nucleus	27.85	13.76
VIT_15s0024g00440.t01	Wine grape	cytosol	17.96	12.67
VIT_15s0024g00450.t01	Wine grape	cytosol	7.46	6.41

Protein Annotations

EntrezGene:100279616	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:AQK93758.1	UniProt:B7ZZ31
EMBL:BT054573	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0043531	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR23155	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI000191726D	EnsemblPlantsGene:Zm00001d010266	EnsemblPlants:Zm00001d010266_P001	EnsemblPlants:Zm00001d010266_T001	SEG:seg

Description

Putative disease resistance RPP13-like protein 1

Coordinates

chr8:+:106704067..106706040

Molecular Weight (calculated)

73433.8 Da

IEP (calculated)

8.697

GRAVY (calculated)

-0.136

Length

657 amino acids

Sequence
(BLAST)

001: MPAPAPWPVS QDVAALADRA SAFSRAVVGP RNDLGALAAA LLRIQPVARE LERWRWLTPG DPEVPDLHAW LFELRDAVAD AESILDELHR RRQIGPPLSA
101: CVYATFRGPG RKLRRLTERL NRARDDSERL RPGSAAAIYG VRSPNRVTGS VFAERKVLGR GEECNSIISR LVDDCEETCR PVSPVIAVVG HGGIGKTTVA
201: QCVYNDARVE ARFDLRAWVC VWDRSDEAEL TREILQSIGC ADDKPCDDGL ASLDSLQEKF ENLVARKRFL LVLDDVWIDE GKTEKENRSI WNRVLVPLRS
301: ATTGSKVLLT TRMKLVAEVL NAGYLVSLDG LRSSDCWLLL KEVALGGETM DFPPELQEVA GTLVAMVKGS PLAAKAIGQM ARSTRSTRKW RTLVNTEISN
401: DIIISSIQLS YKHLPGHLQR CFAYCSIFPS TWRFSRSQLV NMWIALGFIQ SSAEGKGLEE LGQKYFDDLL SRSFFGTANK DQQTYYFLDD LMHILAQHFS
501: AHDCMKINEG IPVVIPPTVR HLSVSTDYLP QLKSKYRLGR LQTLLVLRSS SLSSGHFPRK LLAKFKNLRV LDLSGSDIVE LPESINQLVH LHYLAICSIT
601: NKLPKTIYML KHLEVCDIPI FLFHDDHPRG VGKSVTVKRL KTCCGKQARS VKSLIDV

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.