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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, secretory
Any Predictor:cytosol, nucleus, secretory
iPSORT:secretory
MultiLoc:cytosol
Predotar:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G425500.1 Wheat cytosol 87.08 86.77
TraesCS3B01G468200.1 Wheat cytosol 86.99 86.68
TraesCS3A01G432200.1 Wheat cytosol, mitochondrion 84.87 84.49
HORVU1Hr1G064770.1 Barley cytosol 41.59 42.23
Os05t0414300-02 Rice cytosol 21.06 36.79
Zm00001d010266_P001 Maize plastid 21.33 36.68
OQU78013 Sorghum cytosol, mitochondrion, nucleus, plastid 20.89 36.03
HORVU0Hr1G031070.1 Barley cytosol, plastid 12.12 29.85
HORVU5Hr1G106100.4 Barley cytosol 30.53 29.36
HORVU1Hr1G068200.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 27.88 27.88
HORVU7Hr1G093710.3 Barley mitochondrion 31.42 27.63
VIT_15s0024g00400.t01 Wine grape cytosol, plasma membrane 28.05 27.47
HORVU3Hr1G078990.16 Barley cytosol 28.14 26.88
HORVU0Hr1G031060.1 Barley endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 12.83 26.32
VIT_15s0024g00440.t01 Wine grape cytosol 21.68 26.32
HORVU2Hr1G087730.13 Barley cytosol 26.46 26.23
HORVU0Hr1G032250.1 Barley cytosol 28.05 26.22
VIT_15s0024g00450.t01 Wine grape cytosol 15.4 22.77
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A287MD37ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531EnsemblPlantsGene:HORVU3Hr1G094660EnsemblPlants:HORVU3Hr1G094660.2InterPro:IPR032675
InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364PANTHER:PTHR23155
PANTHER:PTHR23155:SF880SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000B483F6ESEG:seg
Description
No Description!
Coordinates
chrchr3H:-:646967802..646977524
Molecular Weight (calculated)
127092.0 Da
IEP (calculated)
8.248
GRAVY (calculated)
-0.080
Length
1130 amino acids
Sequence
(BLAST)
0001: MVPSSAVAAA GAAAGWLVSP LLQCLGDRAR SFADDLARYL PGGAGDARAD LARLSDELLR LKVTAANVEH ARRRPSDPAL AAWIHRLRDA AHDADDLLDD
0101: IHYGRLADSL AAPRHKLRRI LNFPFSLCRR LFCSDEPLSR LPSVLKKLIA ASTAYAEMAH LVKLDAAASP RLGNGPAGNV SSAVPVDDTL FGRGRELAEL
0201: MERLVGYSDP GPAQLANQGV PVVAIVGDGG IGKTTLVQMA FNHVNFQVHF DLRMWVGVSS CMNLLKLTRE ILQLATEGKD YRGVVNFNYL QDLLRSAVAG
0301: KRFLLILDDI WVDNGMTNSQ NVDQWKELLS PLKNGQQDSR VVVTTRMKMV ADMLGVRIPM MLNGLGTEEH WLLLKKHALS CEKSCEYPQL QEIGRKIALK
0401: LRGSPLAAKV IGGMLNVDRR VRYWNSILEA DIHGDVVTTL LSSYYHLPPQ LQCCFAYCSI FPKNWKFEPK KLVRMWISQG FIQMENGRSM EDCGREYFKQ
0501: LLSRSFFQTL KQGNKMVYLM HDLIHDLAHM VSDGDCGRVE GDMSRNILPT VRHLSVSSNS LGLIKNQYDL KRLRTLIVFR DPLMPPNPIP DSFLAEIKNV
0601: RTLDFTGCDI SRLPEAIDLL THLRYIALPD TIKTIPESVS RLLHLQTFDI PKCQLDRFPE SMNHLTSLRH LRIDSKYISM IRGIGSLVNL QGSVEFHVKK
0701: EKGQTIEELK DMKDLHGVLN IKNLENVQCK EEACKAQLAN KQHVNILKFE WSFANVDFGR NIDAEILNCL QPHPNLEELH IARYKGASSP RWLELKTLSH
0801: LKALYLVNCR RWKFLPPLGQ LTTLRVLHLK EMNSVTEIGP MFYGGLMAFR SLKDLEFDDM PNLVHWTGEA GDSFFPSLQK LKISNCPKLI EVPLLPYTTK
0901: RVTVERSKEV SYLRLSPYCS SRSSKFMLEI SCASILSEGF LLHQRHLEAT EVLNIRGPWG SVAAENFQVL TSLRKLRLCQ CDMDGTRLNL CLQHLSCLDS
1001: LEIIDCQNII SFVLPVGSRY FTTFQHLCLE NCQNLSSLAT LESSIFLKSL IIERCPMITA ESLPSALGRM ISLNKLSISY CPGFQSLPSS IPPSLEFLQL
1101: VGCDPRLTEG LLERQGPEWE KIAFISQITI
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.