Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0047g00740.t01 | Wine grape | nucleus | 47.59 | 82.18 |
| VIT_13s0047g01010.t01 | Wine grape | cytosol | 62.47 | 76.77 |
| VIT_13s0047g00950.t01 | Wine grape | cytosol | 85.04 | 67.69 |
| VIT_13s0101g00300.t01 | Wine grape | extracellular | 81.1 | 64.51 |
| VIT_13s0074g00130.t01 | Wine grape | cytosol, nucleus, peroxisome | 45.06 | 47.38 |
| VIT_00s0276g00050.t01 | Wine grape | cytosol | 41.56 | 46.89 |
| VIT_18s0041g00270.t01 | Wine grape | cytosol | 44.01 | 46.83 |
| VIT_13s0067g03570.t01 | Wine grape | cytosol | 43.13 | 40.24 |
| VIT_07s0141g01030.t01 | Wine grape | cytosol | 47.42 | 40.15 |
| VIT_13s0084g00510.t01 | Wine grape | cytosol | 39.9 | 39.38 |
| VIT_12s0034g01070.t01 | Wine grape | cytosol | 30.45 | 38.33 |
| VIT_13s0084g00360.t01 | Wine grape | plasma membrane | 43.83 | 37.75 |
| VIT_13s0084g00420.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.98 | 36.88 |
| VIT_13s0158g00010.t01 | Wine grape | mitochondrion | 36.57 | 36.6 |
| VIT_13s0139g00210.t01 | Wine grape | cytosol, mitochondrion | 43.66 | 35.59 |
| VIT_13s0139g00220.t01 | Wine grape | plasma membrane | 43.74 | 35.06 |
| VIT_13s0067g03590.t01 | Wine grape | cytosol | 39.55 | 35.01 |
| VIT_13s0139g00070.t01 | Wine grape | cytosol | 25.81 | 33.75 |
| VIT_07s0141g00700.t01 | Wine grape | cytosol | 25.28 | 33.53 |
| VIT_12s0121g00060.t01 | Wine grape | cytosol | 34.12 | 33.42 |
| VIT_13s0019g01950.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.01 | 33.0 |
| VIT_12s0121g00050.t01 | Wine grape | cytosol | 36.57 | 32.48 |
| VIT_00s0467g00010.t01 | Wine grape | extracellular | 36.31 | 32.32 |
| VIT_13s0158g00260.t01 | Wine grape | endoplasmic reticulum | 32.63 | 31.88 |
| VIT_13s0158g00210.t01 | Wine grape | endoplasmic reticulum | 37.45 | 31.75 |
| VIT_13s0019g01140.t01 | Wine grape | cytosol | 36.22 | 31.32 |
| VIT_00s0467g00030.t01 | Wine grape | cytosol | 35.26 | 31.14 |
| VIT_12s0034g01660.t01 | Wine grape | extracellular | 25.02 | 31.02 |
| VIT_13s0158g00290.t01 | Wine grape | plasma membrane, plastid | 37.62 | 30.91 |
| KRH13246 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.62 | 30.3 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 24.67 | 30.29 |
| VIT_12s0034g02500.t01 | Wine grape | extracellular | 35.17 | 29.26 |
| VIT_13s0064g01850.t01 | Wine grape | cytosol, extracellular, nucleus, plastid | 29.4 | 29.04 |
| VIT_12s0034g02310.t01 | Wine grape | extracellular, plasma membrane | 34.38 | 28.92 |
| VIT_13s0067g01100.t01 | Wine grape | extracellular | 23.71 | 28.89 |
| VIT_19s0085g00440.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.87 | 28.37 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 18.72 | 28.01 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 18.2 | 27.88 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 18.72 | 27.37 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 27.38 | 27.12 |
| VIT_13s0106g00020.t01 | Wine grape | cytosol | 30.27 | 27.03 |
| Os03t0579900-01 | Rice | cytosol | 5.42 | 26.72 |
| VIT_13s0067g02430.t01 | Wine grape | extracellular | 32.72 | 25.6 |
| VIT_13s0067g02580.t01 | Wine grape | extracellular | 32.37 | 25.15 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 24.06 | 25.05 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 20.47 | 24.22 |
| EES11060 | Sorghum | nucleus | 20.04 | 23.83 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 25.11 | 23.33 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 19.6 | 22.97 |
| Os01t0308300-00 | Rice | plastid | 21.7 | 22.96 |
| Zm00001d019356_P001 | Maize | cytosol | 18.9 | 22.52 |
| KXG34889 | Sorghum | cytosol | 19.07 | 22.43 |
| GSMUA_Achr10P... | Banana | nucleus | 22.22 | 22.38 |
| Os09t0314200-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 20.04 | 22.25 |
| OQU91451 | Sorghum | cytosol, mitochondrion | 21.35 | 22.22 |
| Os04t0512900-01 | Rice | nucleus | 14.44 | 21.97 |
| Os07t0273900-01 | Rice | cytosol | 13.74 | 21.75 |
| VIT_13s0064g00060.t01 | Wine grape | plasma membrane | 45.67 | 20.6 |
| VIT_13s0019g00380.t01 | Wine grape | cytosol | 41.38 | 20.58 |
| OQU91449 | Sorghum | mitochondrion | 13.82 | 20.36 |
| VIT_13s0139g00130.t01 | Wine grape | cytosol | 42.34 | 18.35 |
| Os03t0579200-00 | Rice | cytosol | 18.99 | 17.42 |
| Os07t0273600-01 | Rice | mitochondrion | 5.07 | 13.3 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:CBI29117 | ProteinID:CBI29117.3 | UniProt:D7TF82 |
| EMBL:FN595767 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt_typical-subtyp |
| InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF868 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0001BE3230 | ArrayExpress:VIT_13s0047g00730 | EnsemblPlantsGene:VIT_13s0047g00730 |
| EnsemblPlants:VIT_13s0047g00730.t01 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr13:-:17259881..17263681
Molecular Weight (calculated)
130660.0 Da
IEP (calculated)
6.504
GRAVY (calculated)
-0.151
Length
1143 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGKTTLAKLV YYDDKTITKH FDKKAWVTVS VQFDAKKITE TILNLVTNSQ SSNSQDLHEI QENLRKELKG KKFLIVLDDL WNDDYDELDR LCSPFWVGAQ
0101: GSKILVTTRN NNVANMMRGH KILHELKQLP YDDCLKIFQT HAFEHMNIDE HPNLESIGRR IVEKLWDFTD KECDIIPALR LSYNHLPSHL KRCFTYCALF
0201: PQDYEFKKEE LILLWMAEGL IQQSNEDEKM EDLGDDYFCE LLSRSFFQSS NSNKSRFVMH DLINDLAKSI AGDTCLHLDD LQRSVPENTR HSSFIRHRYD
0301: IFKNFETFHK KERLRTFIAL PIDELTSGLH SFISDKVLEE LIPRLGHLRV LSLAYYKISE IPDSFGKLKH LRYLNLSHTS IKWLPDSIGN LFYLQTLKLS
0401: CCKELIKLPI TIGNLINLRH LDVAGAIKLQ EMPIGMGKLK DLRILSNFIV DKNNGLTIKE LKDMSHLRGE LCISKLENVL YGGPEFPRWI GGALFSKMVD
0501: LRLIDCRKCT SLPCLGQLPS LKQLRIQGMD VVKKVGAEFY GETRVSAGKF FPSLESLHFY SMSEWEHWED WSSSTESLFP CLHELTIQGC RKLIMKLPTY
0601: LPSLTKLSVV FCPKLESPRS RLPLLKELQV IRCNEAVLSS GNDLTSLTEL TISRISGLIK LHEGFVQFLQ GLRVLKVWAC EELVYLWEDG FGSENSHSLE
0701: IRDCDQLVSL GCNLQSLEID RCAKLERLPN GWQSLTCLEE LTISNCPKLA SFPDVGFPPM LRNLDLENCQ GLKSLPDGMM LKMRNDSTDS NNLCLLEELV
0801: ISRCPSLICF PKGQLPTTLK RLQIEFCENL KSLPEGMMGM CALEDLLIDR CHSLIGLPKG GLPATLKRLS IIDCRRLESL PEGIMHYDST YAAALQALEI
0901: RKCPSLTSFP RGKFPSTLEQ LHIEDCEHLE SISEEMFHST NNSLQSLTIE RYPNLKTLPD CLNTLTHLTS LEISHFENIK TPLSQWGLSR LTSLKLLWIG
1001: GMFPDATSFS DDPHSIIFPT TLSSLTLSEF QNLESLASLS LQTLTSLEEL EIYSCPKLRS ILPTEGLLPD TLSRVYVRDC PHLTQRYSKE EGDDWPKIAH
1101: IPCVLINKVL HLIPNTSFFL FLFSTPLSIS LTRYCNFLIG LNF
0101: GSKILVTTRN NNVANMMRGH KILHELKQLP YDDCLKIFQT HAFEHMNIDE HPNLESIGRR IVEKLWDFTD KECDIIPALR LSYNHLPSHL KRCFTYCALF
0201: PQDYEFKKEE LILLWMAEGL IQQSNEDEKM EDLGDDYFCE LLSRSFFQSS NSNKSRFVMH DLINDLAKSI AGDTCLHLDD LQRSVPENTR HSSFIRHRYD
0301: IFKNFETFHK KERLRTFIAL PIDELTSGLH SFISDKVLEE LIPRLGHLRV LSLAYYKISE IPDSFGKLKH LRYLNLSHTS IKWLPDSIGN LFYLQTLKLS
0401: CCKELIKLPI TIGNLINLRH LDVAGAIKLQ EMPIGMGKLK DLRILSNFIV DKNNGLTIKE LKDMSHLRGE LCISKLENVL YGGPEFPRWI GGALFSKMVD
0501: LRLIDCRKCT SLPCLGQLPS LKQLRIQGMD VVKKVGAEFY GETRVSAGKF FPSLESLHFY SMSEWEHWED WSSSTESLFP CLHELTIQGC RKLIMKLPTY
0601: LPSLTKLSVV FCPKLESPRS RLPLLKELQV IRCNEAVLSS GNDLTSLTEL TISRISGLIK LHEGFVQFLQ GLRVLKVWAC EELVYLWEDG FGSENSHSLE
0701: IRDCDQLVSL GCNLQSLEID RCAKLERLPN GWQSLTCLEE LTISNCPKLA SFPDVGFPPM LRNLDLENCQ GLKSLPDGMM LKMRNDSTDS NNLCLLEELV
0801: ISRCPSLICF PKGQLPTTLK RLQIEFCENL KSLPEGMMGM CALEDLLIDR CHSLIGLPKG GLPATLKRLS IIDCRRLESL PEGIMHYDST YAAALQALEI
0901: RKCPSLTSFP RGKFPSTLEQ LHIEDCEHLE SISEEMFHST NNSLQSLTIE RYPNLKTLPD CLNTLTHLTS LEISHFENIK TPLSQWGLSR LTSLKLLWIG
1001: GMFPDATSFS DDPHSIIFPT TLSSLTLSEF QNLESLASLS LQTLTSLEEL EIYSCPKLRS ILPTEGLLPD TLSRVYVRDC PHLTQRYSKE EGDDWPKIAH
1101: IPCVLINKVL HLIPNTSFFL FLFSTPLSIS LTRYCNFLIG LNF
0001: MAGELISFGI QNLWNLLSQE CELFQGVEDQ VTELKRDLNL LSSFLKDADA KKHTSAVVKN CVEEIKEIIY DGEDTIETFV LEQNLGKTSG IKKSIRRLAC
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
0101: IIPDRRRYAL GIGGLSNRIS KVIRDMQSFG VQQAIVDGGY KQPQGDKQRE MRPRFSKDDD SDFVGLEANV KKLVGYLVDE ANVQVVSITG MGGLGKTTLA
0201: KQVFNHEDVK HQFDGLSWVC VSQDFTRMNV WQKILRDLKP KEEEKKIMEM TQDTLQGELI RLLETSKSLI VLDDIWEKED WELIKPIFPP TKGWKVLLTS
0301: RNESVAMRRN TSYINFKPEC LTTEDSWTLF QRIALPMKDA AEFKIDEEKE ELGKLMIKHC GGLPLAIRVL GGMLAEKYTS HDWRRLSENI GSHLVGGRTN
0401: FNDDNNNTCN YVLSLSFEEL PSYLKHCFLY LAHFPDDYEI NVKNLSYYWA AEGIFQPRHY DGEIIRDVGD VYIEELVRRN MVISERDVKT SRFETCHLHD
0501: MMREVCLLKA KEENFLQITS SRTSTGNSLS IVTSRRLVYQ YPITLDVEKD INDPKLRSLV VVANTYMFWG GWSWMLLGSS FIRLELLRVL DIHRAKLKGG
0601: KLASSIGQLI HLRYLNLKHA EVTHIPYSLG NLKLLIYLNL VILVSGSTLV PNVLKEMQQL RYLALPKDMG RKTKLELSNL VKLETLKNFS TKNCSLEDLR
0701: GMVRLRTLTI ELRKETSLET LAASIGGLKY LESLTITDLG SEMRTKEAGI VFDFVYLKTL TLKLYMPRLS KEQHFPSHLT TLYLQHCRLE EDPMPILEKL
0801: HQLKELELRR KSFSGKEMVC SSGGFPQLQK LSIKGLEEWE DWKVEESSMP VLHTLDIRDC RKLKQLPDEH LPSHLTSISL FFCCLEEDPM PTLERLVHLK
0901: ELQLLFRSFS GRIMVCAGSG FPQLHKLKLS ELDGLEEWIV EDGSMPQLHT LEIRRCPKLK KLPNGFPQLQ NLELNELEEW EEWIVEDGSM PLLHTLRIWN
1001: CPKLKQLPDG LRFIYSLKNL TVPKRWKKRL SKGGEDYYKV QHIPSVEFY
Arabidopsis Description
RF9Probable disease resistance protein RDL6 [Source:UniProtKB/Swiss-Prot;Acc:P0DI18]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.