Factsheet for VIT_13s0019g01950.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 3
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0467g00010.t01	Wine grape	extracellular	64.66	64.56
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	66.22	62.98
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	57.33	62.82
VIT_00s0467g00030.t01	Wine grape	cytosol	63.03	62.44
VIT_13s0019g01140.t01	Wine grape	cytosol	62.87	60.97
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	60.22	55.5
VIT_12s0121g00050.t01	Wine grape	cytosol	47.82	47.63
VIT_12s0034g01660.t01	Wine grape	extracellular	33.85	47.07
VIT_12s0034g01070.t01	Wine grape	cytosol	32.45	45.81
VIT_13s0139g00070.t01	Wine grape	cytosol	30.97	45.42
VIT_12s0121g00060.t01	Wine grape	cytosol	40.41	44.39
VIT_13s0067g01100.t01	Wine grape	extracellular	31.83	43.5
VIT_07s0141g00700.t01	Wine grape	cytosol	29.1	43.27
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	38.77	42.96
VIT_12s0034g02500.t01	Wine grape	extracellular	42.9	40.03
VIT_13s0158g00010.t01	Wine grape	mitochondrion	35.65	40.02
VIT_13s0074g00130.t01	Wine grape	cytosol, nucleus, peroxisome	33.78	39.83
VIT_13s0139g00210.t01	Wine grape	cytosol, mitochondrion	43.37	39.66
VIT_13s0047g00740.t01	Wine grape	nucleus	20.44	39.58
VIT_13s0047g01010.t01	Wine grape	cytosol	28.71	39.57
VIT_13s0084g00420.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.07	39.39
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	41.42	39.07
VIT_19s0085g00440.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.76	38.82
VIT_13s0084g00360.t01	Wine grape	plasma membrane	39.94	38.58
VIT_13s0139g00220.t01	Wine grape	plasma membrane	42.75	38.43
VIT_13s0084g00510.t01	Wine grape	cytosol	34.71	38.43
VIT_13s0067g03590.t01	Wine grape	cytosol	38.14	37.88
VIT_13s0047g00950.t01	Wine grape	cytosol	42.2	37.67
VIT_13s0101g00300.t01	Wine grape	extracellular	41.97	37.44
VIT_07s0141g01030.t01	Wine grape	cytosol	39.39	37.41
VIT_13s0106g00020.t01	Wine grape	cytosol	37.29	37.34
VIT_13s0047g00730.t01	Wine grape	cytosol	33.0	37.01
VIT_13s0067g03570.t01	Wine grape	cytosol	35.26	36.9
VIT_00s0276g00050.t01	Wine grape	cytosol	28.71	36.33
VIT_18s0041g00270.t01	Wine grape	cytosol	30.34	36.22
CDX97579	Canola	cytosol	35.8	35.8
CDX98462	Canola	cytosol, plastid	22.54	35.63
VIT_13s0067g02580.t01	Wine grape	extracellular	40.64	35.42
VIT_13s0067g02430.t01	Wine grape	extracellular	40.33	35.39
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	31.28	34.75
AT3G14460.1	Thale cress	cytosol	37.83	34.06
GSMUA_Achr9P11390_001	Banana	extracellular	25.51	33.85
Bra027333.1-P	Field mustard	cytosol	36.97	33.64
Os07t0273900-01	Rice	cytosol	18.88	33.52
KXG34889	Sorghum	cytosol	25.2	33.23
Zm00001d019356_P001	Maize	cytosol	24.65	32.95
GSMUA_Achr10P...	Banana	cytosol, golgi	19.11	32.84
VIT_15s0024g00440.t01	Wine grape	cytosol	23.71	32.65
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	30.89	32.2
Os04t0512900-01	Rice	nucleus	18.8	32.09
GSMUA_Achr6P32070_001	Banana	cytosol	27.07	31.6
EES11060	Sorghum	nucleus	23.24	31.01
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	24.88	31.0
OQU91451	Sorghum	cytosol, mitochondrion	26.29	30.69
GSMUA_Achr10P...	Banana	nucleus	27.15	30.66
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	18.56	30.43
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	23.09	30.36
Os07t0273600-01	Rice	mitochondrion	10.3	30.28
OQU91449	Sorghum	mitochondrion	18.17	30.03
Os01t0308300-00	Rice	plastid	24.65	29.26
VIT_15s0024g00450.t01	Wine grape	cytosol	16.69	28.01
Os03t0579200-00	Rice	cytosol	24.02	24.72
Os03t0579900-01	Rice	cytosol	4.29	23.71
VIT_13s0019g00380.t01	Wine grape	cytosol	41.5	23.15
VIT_13s0064g00060.t01	Wine grape	plasma membrane	44.77	22.65
VIT_13s0139g00130.t01	Wine grape	cytosol	42.82	20.82

Protein Annotations

Gene3D:1.10.8.430	EntrezGene:100250349	wikigene:100250349	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1
ProteinID:CCB44588	ProteinID:CCB44588.1	UniProt:F6GXA2	EMBL:FN594963	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	EntrezGene:LOC100250349	wikigene:LOC100250349	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_typical-subtyp	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF672	InterPro:RX-like_CC
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000210837A	ArrayExpress:VIT_13s0019g01950	EnsemblPlantsGene:VIT_13s0019g01950
EnsemblPlants:VIT_13s0019g01950.t01	RefSeq:XP_003634909	RefSeq:XP_003634909.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr13_random:+:3258140..3261986

Molecular Weight (calculated)

145866.0 Da

IEP (calculated)

6.851

GRAVY (calculated)

-0.213

Length

1282 amino acids

Sequence
(BLAST)

0001: MFVAEAAVSS IFDLVLEKLV AAPLLENARS QNVEATLQEW RRILLHIEAV LTDAEQKQIR ERAVKLWLDD LKSLVYDMED VLDEFNTEAN LQIVIHGPQA
0101: STSKVHKLIP TCFAACHPTS VKFTAKIGEK IEKITRELDA VAKRKHDFHL REGVGGLSFK MEKRLQTTSL VDESSIYGRD AEKEAIIQFL LSEEASRDNG
0201: DNGVSVVPIV GMGGVGKTTL AQIIYHDKRV ESHFHTRIWV CVSDRFDVTG ITKAILESVT HSSTDSKNLD SLQNSLKNGL NGKKFFLVLD DVWNEKPQNW
0301: DALKAPFRAG AQGSMIIVTT RNEDVASIMR TTASSHHLDV LSYEECRLLF AKHAFAHMNT NIRQKLEPIG EKIVRKCRGL PLAAKSLGSL LHTKQDENAW
0401: NEVLNNGIWD FQIEQSDILP ALYLSYHYLP TNLKRCFAYC SIFPKDYKFE KRNLVLLWMA EGLLGGSKRE ETIEDYGNMC FDNLLSRSFF QQASDDESIF
0501: LMHDLIHDLA QFVSGKFCSS LDDEKKSQIS KQTRHSSYVR AEQFELSKKF DPFYEAHNLR TFLPVHSGYQ YPRIFLSKKV SDLLLPTLKC LRVLSLPDYH
0601: IVELPHSIGT LKHLRYLDLS HTSIRRLPES ITNLFNLQTL MLSNCDSLTH LPTKMGKLIN LRHLDISGTR LKEMPMGMEG LKRLRTLTAF VVGEDGGAKI
0701: KELRDMSHLG GRLCISKLQN VVDAMDVFEA NLKGKERLDE LVMQWDGEAT ARDLQKETTV LEKLQPHNNL KELTIEHYCG EKFPNWLSEH SFTNMVYMHL
0801: HDCKTCSSLP SLGQLGSLKV LSIMRIDGVQ KVGQEFYGNI GSSSFKPFGS LEILRFEEML EWEEWVCRGV EFPCLKQLYI EKCPKLKKDL PEHLPKLTTL
0901: QIRECQQLVC CLPMAPSIRV LMLEEYDDVM VRSAGSLTSL AYLHIRKIPD ELGQLHSLVE LYVSSCPELK EIPPILHNLT SLKNLNIRYC ESLASFPEMA
1001: LPPMLERLRI WSCPILESLP EGMMQNNTTL QCLEICCCGS LRSLPRDIDS LKTLSISGCK KLELALQEDM THNHYASLTE FEINGIWDSL TSFPLASFTK
1101: LEKLHLWNCT NLESLSIRDG LHHVDLTSLR SLEIRNCPNL VSFPRGGLPT PNLRMLDIRN CKKLKSLPQG MHTLLTSLQD LYISNCPEID SFPEGGLPTN
1201: LSSLYIMNCN KLLACRMEWG LQTLPFLRTL QIAGYEKERF PEERFLPSTL TSLGIRGFPN LKSLDNKGLQ HLTSLETLEI WK

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.