CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97579	Canola	cytosol	92.97	58.81
AT3G14460.1	Thale cress	cytosol	83.72	47.68
Os07t0273900-01	Rice	cytosol	23.8	26.73
Os04t0512900-01	Rice	nucleus	24.41	26.36
Os07t0273600-01	Rice	mitochondrion	13.44	25.0
VIT_13s0019g01140.t01	Wine grape	cytosol	38.1	23.37
VIT_13s0019g01950.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.63	22.54
VIT_00s0467g00030.t01	Wine grape	cytosol	35.88	22.49
CDX97580	Canola	extracellular, plasma membrane	27.62	22.31
CDX98463	Canola	endoplasmic reticulum	24.41	22.12
VIT_00s0467g00010.t01	Wine grape	extracellular	34.4	21.73
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	36.0	21.66
GSMUA_Achr9P11390_001	Banana	extracellular	25.15	21.12
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	36.13	21.06
Zm00001d019356_P001	Maize	cytosol	24.41	20.65
KXG34889	Sorghum	cytosol	24.54	20.47
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	24.54	20.41
GSMUA_Achr6P32070_001	Banana	cytosol	27.37	20.22
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	25.28	19.92
EES11060	Sorghum	nucleus	22.93	19.35
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	27.74	19.23
GSMUA_Achr10P...	Banana	cytosol, golgi	17.26	18.77
GSMUA_Achr10P...	Banana	nucleus	26.14	18.68
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	28.24	18.62
Os01t0308300-00	Rice	plastid	24.78	18.61
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.26	17.9
OQU91451	Sorghum	cytosol, mitochondrion	23.92	17.67
OQU91449	Sorghum	mitochondrion	16.52	17.27
Os03t0579200-00	Rice	cytosol	22.81	14.85
Os03t0579900-01	Rice	cytosol	2.59	9.05

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078EBR7	EnsemblPlants:CDX98462	ProteinID:CDX98462
ProteinID:CDX98462.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0043531
EnsemblPlantsGene:GSBRNA2T00106082001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR23155
PANTHER:PTHR23155:SF414	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0004EECFFB	SEG:seg

Description

BnaC05g39130D

Coordinates

chrLK031905:-:292863..297521

Molecular Weight (calculated)

91312.4 Da

IEP (calculated)

6.057

GRAVY (calculated)

-0.129

Length

811 amino acids

Sequence
(BLAST)

001: MARSYSSNSA NVMIERINNS QELVELCKGK SSSALLKRLK VALATVHPVI ADADQKADHV REVKHWLTGL TDAFFQAEDV LDELLTEALR RRVVAEVGGF
101: GGLFQNLMGG NEANKNKIER KMENVVRLLE HHVRHIEIIG LKEYSETREP QWRQASRSRP DDLPQGRVVG RAEDKVALLN LLLSDDETSI RRPALVSTVG
201: MPGVGKTTLT QIVFKDDCVT NHFDVKMWIS VGLNFNVFTV TKAVLQEITS SAVNTEDLPS LQLQLKQELS GKRFLLVLDD IWSESSTEWE SFKVAFTDAE
301: EGSKIVITTR SEIVSTAAQA DKVYRVKLMT TEECWELISR SAFGNISVGS INQELEGIGK RIAEQCKGLP LTARAIASHL RSKPNPDDWY DVSKNFSTYT
401: NSILPVLKLS FDTLPPVLKR CFSLCSIFPK GYVFKREELV LLWMAIDLLY QPRSNKRLEE IGYDYIDDLV GRSFFLRLDI TMKSFVMHDL MNDLAKATSG
501: DFCFRREDDN IAEVPSKVRH FSFSRSQTIL PFNVPTGLES LQLTEKILNP LLQALSSLRI LSLSHYQITR LPKSLKGLKQ LRYLDLSSTK IKDLPEFVCT
601: LCNLQTLLLS NCRYLTSLPT NIAELINLRL LDLVGTPLNL RALPEKLFGL TSLQSLFVIK CPKLDSIPGG GFPSNLRTLC INLCPKLTPR IEWGLRDLEN
701: LRNLEIEGGN EDIESFPDEG LLPRGIFSLR ISRFENLSTL NQLGFRDTKG LETMEIDGCD KLRISMEEDL PPSLSCLRIS SCSLLSEKLA EQGTECVFSI
801: PYVEIDGEIF S

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.