Factsheet for VIT_00s0467g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0467g00010.t01	Wine grape	extracellular	84.85	85.51
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	74.88	71.88
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	63.14	69.83
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	68.86	64.05
VIT_13s0019g01950.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.44	63.03
VIT_13s0019g01140.t01	Wine grape	cytosol	57.5	56.28
VIT_12s0034g01660.t01	Wine grape	extracellular	32.69	45.88
VIT_12s0121g00050.t01	Wine grape	cytosol	45.13	45.38
VIT_12s0034g01070.t01	Wine grape	cytosol	31.76	45.26
VIT_07s0141g00700.t01	Wine grape	cytosol	28.52	42.81
VIT_13s0139g00070.t01	Wine grape	cytosol	28.52	42.22
VIT_12s0121g00060.t01	Wine grape	cytosol	37.79	41.9
VIT_13s0067g01100.t01	Wine grape	extracellular	30.14	41.58
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	35.55	39.76
VIT_13s0084g00420.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.56	39.23
VIT_12s0034g02500.t01	Wine grape	extracellular	41.58	39.16
VIT_13s0084g00360.t01	Wine grape	plasma membrane	39.64	38.66
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	40.57	38.63
VIT_13s0074g00130.t01	Wine grape	cytosol, nucleus, peroxisome	32.23	38.36
VIT_13s0047g00740.t01	Wine grape	nucleus	19.55	38.22
VIT_13s0139g00210.t01	Wine grape	cytosol, mitochondrion	41.34	38.16
VIT_07s0141g01030.t01	Wine grape	cytosol	39.8	38.15
VIT_13s0139g00220.t01	Wine grape	plasma membrane	40.88	37.1
VIT_13s0067g03570.t01	Wine grape	cytosol	35.09	37.06
VIT_18s0041g00270.t01	Wine grape	cytosol	30.76	37.06
VIT_00s0276g00050.t01	Wine grape	cytosol	28.98	37.02
VIT_13s0084g00510.t01	Wine grape	cytosol	33.08	36.96
VIT_13s0106g00020.t01	Wine grape	cytosol	36.24	36.64
VIT_19s0085g00440.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.8	36.54
VIT_13s0158g00010.t01	Wine grape	mitochondrion	32.23	36.51
VIT_13s0067g03590.t01	Wine grape	cytosol	35.94	36.02
CDX98462	Canola	cytosol, plastid	22.49	35.88
VIT_13s0101g00300.t01	Wine grape	extracellular	39.8	35.84
VIT_13s0047g01010.t01	Wine grape	cytosol	25.5	35.48
VIT_13s0047g00730.t01	Wine grape	cytosol	31.14	35.26
VIT_13s0047g00950.t01	Wine grape	cytosol	39.1	35.24
GSMUA_Achr9P11390_001	Banana	extracellular	26.2	35.09
VIT_13s0067g02430.t01	Wine grape	extracellular	38.49	34.09
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	30.29	33.97
CDX97579	Canola	cytosol	33.62	33.93
VIT_13s0067g02580.t01	Wine grape	extracellular	38.49	33.85
AT3G14460.1	Thale cress	cytosol	35.63	32.37
Bra027333.1-P	Field mustard	cytosol	34.78	31.94
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	30.29	31.87
VIT_15s0024g00440.t01	Wine grape	cytosol	22.72	31.58
Os07t0273900-01	Rice	cytosol	17.47	31.3
KXG34889	Sorghum	cytosol	23.49	31.28
GSMUA_Achr6P32070_001	Banana	cytosol	26.28	30.97
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	24.57	30.9
Os04t0512900-01	Rice	nucleus	17.93	30.89
GSMUA_Achr10P...	Banana	cytosol, golgi	17.77	30.83
Zm00001d019356_P001	Maize	cytosol	22.72	30.66
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	22.87	30.36
Os07t0273600-01	Rice	mitochondrion	10.2	30.28
EES11060	Sorghum	nucleus	22.41	30.18
GSMUA_Achr10P...	Banana	nucleus	25.81	29.43
OQU91449	Sorghum	mitochondrion	17.54	29.25
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.62	29.16
Os01t0308300-00	Rice	plastid	24.03	28.8
OQU91451	Sorghum	cytosol, mitochondrion	23.96	28.23
VIT_15s0024g00450.t01	Wine grape	cytosol	16.62	28.14
Os03t0579200-00	Rice	cytosol	22.95	23.84
Os03t0579900-01	Rice	cytosol	4.17	23.28
VIT_13s0064g00060.t01	Wine grape	plasma membrane	42.81	21.86
VIT_13s0019g00380.t01	Wine grape	cytosol	38.1	21.45
VIT_13s0139g00130.t01	Wine grape	cytosol	41.34	20.29

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB57397	ProteinID:CCB57397.1	ncoils:Coil
UniProt:F6HRT9	EMBL:FN596038	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PFscan:PS51450	PANTHER:PTHR23155	PANTHER:PTHR23155:SF672	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI00021082D1	ArrayExpress:VIT_00s0467g00030	EnsemblPlantsGene:VIT_00s0467g00030	EnsemblPlants:VIT_00s0467g00030.t01	SEG:seg

Description

No Description!

Coordinates

chrUn:+:29801784..29810355

Molecular Weight (calculated)

146768.0 Da

IEP (calculated)

7.427

GRAVY (calculated)

-0.186

Length

1294 amino acids

Sequence
(BLAST)

0001: MTDHRVELVI PLRVLRPQDH ENVGLDSKND FFDSFISKEK MAVVEAFLSS LFEVVLDKLV ATPLLDYARR IKVDTAVLQE WMNTLLHLQA VLHDAEQRQI
0101: REEAVKRWVD DLKALAYDIE DVLDEFDMEA KRCSWVQGPQ TSTSKVRKLI PSFHPSGVIF NKKIGQKIKI ITRALDAIVK RKSDLHLTQS VGGVSAVTEQ
0201: RLTTSLIDKA EFYGRDGDKE KIMELLLSDE IASADKVQVI PIVGMGGVGK TTLAQMIYND ERVGDNFDIR VWVCVSDQFD LVGITKAILE SVPEHSSDTS
0301: NTLQSLQDSL QKKLNGKRFF LVLDDIWKED PNSWSTLQAP FRNGAQGSVV MVTTRLEDVA SIMRTTSSHH LSKLSDEDCW SLFAGIAFEN VTPDARQNLE
0401: PIGRKIIKKC DGLPLAANTL AGLLRCKQDE KTWKDMLNSE IWDLRTEQSR ILPALHLSYH YLPTKVKQCF AYCSIFPKDY EFQKEELILL WMAQGLAGSL
0501: KGGETMEDVG EICFQNLLSR SFFQQSGHNK SMFVMHDLIH DLAQFVSGEF CFRLEMGQQK NVSKNARHFS YDRELFDMSK KFDPLRDKVL HDVLPKFRCM
0601: RVLSLSDYNI TYLPDSFGNL KHLRYLNLSG TKIQKLPKSI GMLLNLQSLV LSGCFRLTEL PAEIGKLINL HHLDISRTKI EGMPMGINGL KGLRRLTTYV
0701: VGKHGGARLG ELRDLAHLQG ALSILNLQNV VPTDDIEVNL MKKEDLDDLV FAWDPNAIVR VSEIQTKVLE KLQPHNKVKR LSIECFYGIK FPKWLEDPSF
0801: MNLVFLRLRG CKKCLSLPPL GQLQSLKDLC IVKMANVRKV GVELYGNSYC SPTSIKPFGS LEILRFEGMS KWEEWVCREI EFPCLKELCI KKCPKLKKDL
0901: PKHLPKLTKL EIRECQELVC CLPMAPSIRE LELEKCDDVV VRSAGSLTSL ASLDIRNVCK IPDADELGQL NSLVRLGVCG CPELKEIPPI LHSLTSLKKL
1001: NIEDCESLAS FPEMALPPML ERLRICSCPI LESLPEMQNN TTLQHLSIDY CDSLRSLPRD IDSLKTLSIC RCKKLELALQ EDMTHNHYAS LTELTIWGTG
1101: LPTPNLRLLL IRNCEKLKSL PQGMHTLLTS LQFLHISSCP EIDSFPEGGL PTNLSKLSII GNCSKLVANQ MEWGLQTLPF LRTLAIVECE KERFPEERFL
1201: PSTLTSLEIG GFPNLKSLDN KGFQHLTSLE TLEIWKCGNL KSFPKQGLPS SLTRLYIKEC PLLKKRCQRN KGKEWPNISH IPCIAFDRQT TNEE

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.