Factsheet for VIT_13s0139g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
extracellular 1
plasma membrane 1
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0139g00220.t01	Wine grape	plasma membrane	82.53	81.14
VIT_13s0139g00070.t01	Wine grape	cytosol	37.95	60.87
VIT_13s0084g00360.t01	Wine grape	plasma membrane	46.22	48.83
VIT_13s0084g00420.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.01	48.67
VIT_13s0074g00130.t01	Wine grape	cytosol, nucleus, peroxisome	36.95	47.65
VIT_00s0276g00050.t01	Wine grape	cytosol	33.88	46.89
VIT_13s0084g00510.t01	Wine grape	cytosol	38.59	46.72
VIT_07s0141g00700.t01	Wine grape	cytosol	28.67	46.64
VIT_07s0141g01030.t01	Wine grape	cytosol	44.79	46.52
VIT_13s0047g01010.t01	Wine grape	cytosol	30.6	46.13
VIT_13s0047g00740.t01	Wine grape	nucleus	21.61	45.77
VIT_13s0067g03590.t01	Wine grape	cytosol	42.01	45.62
VIT_18s0041g00270.t01	Wine grape	cytosol	34.74	45.34
VIT_13s0067g03570.t01	Wine grape	cytosol	39.23	44.9
VIT_13s0101g00300.t01	Wine grape	extracellular	45.72	44.61
VIT_13s0047g00950.t01	Wine grape	cytosol	45.58	44.5
VIT_13s0019g01140.t01	Wine grape	cytosol	41.3	43.8
VIT_13s0047g00730.t01	Wine grape	cytosol	35.59	43.66
VIT_13s0019g01950.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.66	43.37
VIT_12s0034g01660.t01	Wine grape	extracellular	28.46	43.28
VIT_13s0158g00010.t01	Wine grape	mitochondrion	34.66	42.56
VIT_00s0467g00010.t01	Wine grape	extracellular	38.73	42.29
VIT_12s0121g00060.t01	Wine grape	cytosol	35.16	42.25
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	34.95	41.88
VIT_12s0121g00050.t01	Wine grape	cytosol	38.16	41.57
VIT_12s0034g01070.t01	Wine grape	cytosol	26.82	41.41
VIT_00s0467g00030.t01	Wine grape	cytosol	38.16	41.34
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	39.59	41.17
VIT_13s0067g01100.t01	Wine grape	extracellular	27.03	40.41
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	38.94	39.25
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	32.38	39.24
VIT_19s0085g00440.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.59	38.41
VIT_12s0034g02500.t01	Wine grape	extracellular	37.23	37.99
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	36.16	37.31
VIT_13s0106g00020.t01	Wine grape	cytosol	33.31	36.48
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	28.6	34.75
VIT_13s0067g02430.t01	Wine grape	extracellular	35.24	33.81
Os07t0273900-01	Rice	cytosol	17.33	33.66
GSMUA_Achr9P11390_001	Banana	extracellular	23.18	33.64
GSMUA_Achr10P...	Banana	cytosol, golgi	17.83	33.51
VIT_13s0067g02580.t01	Wine grape	extracellular	35.02	33.38
Os04t0512900-01	Rice	nucleus	17.69	33.02
VIT_13s0019g00380.t01	Wine grape	cytosol	53.85	32.85
Zm00001d019356_P001	Maize	cytosol	22.25	32.53
VIT_15s0024g00440.t01	Wine grape	cytosol	21.47	32.33
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	28.32	32.28
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.97	32.23
KXG34889	Sorghum	cytosol	22.18	32.0
GSMUA_Achr6P32070_001	Banana	cytosol	25.04	31.97
OQU91449	Sorghum	mitochondrion	17.48	31.57
GSMUA_Achr10P...	Banana	nucleus	25.46	31.45
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	22.9	31.2
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	21.54	30.97
Os07t0273600-01	Rice	mitochondrion	9.49	30.5
VIT_13s0139g00130.t01	Wine grape	cytosol	57.13	30.38
Os01t0308300-00	Rice	plastid	23.4	30.37
VIT_15s0024g00450.t01	Wine grape	cytosol	16.26	29.84
OQU91451	Sorghum	cytosol, mitochondrion	23.11	29.51
EES11060	Sorghum	nucleus	19.76	28.82
Os03t0579200-00	Rice	cytosol	22.54	25.36
Os03t0579900-01	Rice	cytosol	3.99	24.14
VIT_13s0064g00060.t01	Wine grape	plasma membrane	42.72	23.64

Protein Annotations

Gene3D:1.10.8.430	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB58666	ProteinID:CCB58666.1
ncoils:Coil	UniProt:F6HVF3	EMBL:FN596255	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155
PANTHER:PTHR23155:SF869	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002109C37	ArrayExpress:VIT_13s0139g00210
EnsemblPlantsGene:VIT_13s0139g00210	EnsemblPlants:VIT_13s0139g00210.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:-:20452421..20460206

Molecular Weight (calculated)

158104.0 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.150

Length

1402 amino acids

Sequence
(BLAST)

0001: MNVLELLRPH RNLKKLIAFL SSFFKTLLDE LISSDLLDYA RQVQVHAELN KWEKTLKKIH AVLEDAEEKQ MENQVVKIWL DDLRDLAYDV EDILDELATE
0101: ALGRKLMAET QPSTSKFRSL IPSCCTSFTP SAIKFNVKMR SKIEKITERL QDISSQQNNL LLTEKVTGKR SAKATEILPT TSLVDESRVC GRETDKAAIL
0201: DLLLHDHEPS DDAVRVIPII GMGGVGKTTL AQLAYNDDKV ESHFDLRVWA CVSDDFDVLR VTKTIVQSVA SDMSDFNDLN LLQVKLKEKL SGTKFLLVLD
0301: DVWNQNCDKW DTLYAPMRTG AQGSRVIVTT RNQGVVSAIG ASSAYPLKEL SNDECLSLLA QQALGTRNFH NHPHLRVVGE EIVKKCKGLP LAAKALGGML
0401: RTKLNRDAWE DILKSKIWDL PDQENNTILP ALKLSYHHLP SHLKCCFAYC SIFPKDYEFD VDELVLLWMG EGFLHQVNRQ KQMEEIGTEF FHELFARSFF
0501: QQSNHSSSQF VMHDLVHDLA QFVAGGVCFN LEEKIENNQQ HTICERARHS GFTRQVYEVV GKFKAFDKVK NLRTLIVLSI MKYPFGYISK QVVHDLIMPM
0601: RCLRVLSLAG YCMGEVPSSI GELIHLRYLN FSESNIQSLP NSVGHLYNLQ TLILRGCRQL TKLPTGIGKL KNLRHLDITG TSQQLEMPFQ LSNLTNLQVL
0701: TRFIVSKSRG VGIEELKNCS NLQGVLSISG LQEVVDVGEA RAANLKDKKK IEELTMQWSN DCWDARNDKR ELRVLESLQP RENLRRLTIA FYGGSKFPSW
0801: LGDPSFSVTV ELTLKNCKKC TLLPNLGGLS MLKVLCIEGM SEVKSIGAEF YGESMNPFAS LKELRFEDMP EWESWSHSNL IKEDVGTFPH LEKFLIRKCP
0901: KLIGELPKCL QSLVELEVLE CPGLMCGLPK LASLRELNLK ECDEAVLGGA QFDLPSLVTV NLIQISRLAC LRTGFTRSLV ALQELKIHGC DGLTCLWEEQ
1001: WLPCNLKKLE IRDCANLEKL SNGLQTLTRL EELEIRSCPK LESFPDSGFP PMLRRLKLFY CGGLKSLPHN YNSCPLAVLT IYGSPFLKCF PNGELPTTLK
1101: KLYIWDCQSL ESLPEGLMHH NSTSSSNTCC LEDLWIRNCS SLNSFPTGEL PSTLKKLTIV RCTNLESVSQ KIAPNSTALE YLQLEWYPNL ESLQGCLDSL
1201: RQLRINVCGG LECFPERGLS IPNLEFLEIE GCETLKSLTH QMRNLKSLRS LTISECPGLK SFPEEGLAPN LTSLEIANCK NLKTPISEWG LDTLTSLSKL
1301: TIRNMFPNMV SFPDEECLLP ISLTSLKIKG MESLASLALH NLISLRFLHI INCPNLRSLG PLPATLAELD IYDCPTIEER YLKEGGEYWS NVAHIPRISK
1401: GS

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.