Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0084g00360.t01 | Wine grape | plasma membrane | 89.51 | 83.57 |
| VIT_13s0084g00510.t01 | Wine grape | cytosol | 77.8 | 83.25 |
| VIT_07s0141g00700.t01 | Wine grape | cytosol | 40.11 | 57.66 |
| VIT_13s0139g00070.t01 | Wine grape | cytosol | 37.05 | 52.52 |
| VIT_07s0141g01030.t01 | Wine grape | cytosol | 54.4 | 49.93 |
| VIT_13s0067g03590.t01 | Wine grape | cytosol | 50.69 | 48.64 |
| VIT_00s0276g00050.t01 | Wine grape | cytosol | 39.55 | 48.37 |
| VIT_13s0067g03570.t01 | Wine grape | cytosol | 46.49 | 47.02 |
| VIT_13s0047g00740.t01 | Wine grape | nucleus | 24.54 | 45.92 |
| VIT_13s0047g01010.t01 | Wine grape | cytosol | 34.3 | 45.7 |
| VIT_12s0034g01660.t01 | Wine grape | extracellular | 33.74 | 45.34 |
| VIT_13s0074g00130.t01 | Wine grape | cytosol, nucleus, peroxisome | 38.1 | 43.42 |
| VIT_13s0101g00300.t01 | Wine grape | extracellular | 50.2 | 43.28 |
| VIT_13s0139g00210.t01 | Wine grape | cytosol, mitochondrion | 48.67 | 43.01 |
| VIT_13s0047g00950.t01 | Wine grape | cytosol | 49.72 | 42.9 |
| VIT_13s0139g00220.t01 | Wine grape | plasma membrane | 48.83 | 42.43 |
| VIT_18s0041g00270.t01 | Wine grape | cytosol | 36.72 | 42.37 |
| VIT_13s0158g00010.t01 | Wine grape | mitochondrion | 38.34 | 41.59 |
| VIT_13s0067g01100.t01 | Wine grape | extracellular | 31.15 | 41.15 |
| VIT_13s0158g00260.t01 | Wine grape | endoplasmic reticulum | 38.58 | 40.85 |
| VIT_13s0047g00730.t01 | Wine grape | cytosol | 36.88 | 39.98 |
| VIT_13s0019g01140.t01 | Wine grape | cytosol | 41.0 | 38.43 |
| VIT_00s0467g00010.t01 | Wine grape | extracellular | 39.63 | 38.24 |
| VIT_13s0019g01950.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.39 | 38.07 |
| VIT_13s0158g00210.t01 | Wine grape | endoplasmic reticulum | 41.08 | 37.76 |
| VIT_00s0467g00030.t01 | Wine grape | cytosol | 39.23 | 37.56 |
| VIT_12s0121g00050.t01 | Wine grape | cytosol | 38.74 | 37.3 |
| VIT_12s0034g01070.t01 | Wine grape | cytosol | 27.2 | 37.11 |
| VIT_12s0121g00060.t01 | Wine grape | cytosol | 34.54 | 36.68 |
| VIT_12s0034g02310.t01 | Wine grape | extracellular, plasma membrane | 38.74 | 35.32 |
| VIT_13s0158g00290.t01 | Wine grape | plasma membrane, plastid | 39.63 | 35.3 |
| VIT_19s0085g00440.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.16 | 35.29 |
| VIT_13s0064g01850.t01 | Wine grape | cytosol, extracellular, nucleus, plastid | 32.77 | 35.09 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 27.2 | 34.89 |
| KRH13246 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.79 | 34.74 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 20.66 | 34.32 |
| VIT_12s0034g02500.t01 | Wine grape | extracellular | 37.77 | 34.06 |
| Os04t0512900-01 | Rice | nucleus | 20.18 | 33.29 |
| VIT_13s0106g00020.t01 | Wine grape | cytosol | 33.82 | 32.73 |
| Os07t0273900-01 | Rice | cytosol | 18.97 | 32.55 |
| Zm00001d019356_P001 | Maize | cytosol | 25.18 | 32.53 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 28.81 | 32.51 |
| KXG34889 | Sorghum | cytosol | 25.42 | 32.41 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 19.94 | 31.59 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 24.54 | 31.18 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 28.89 | 31.02 |
| Os07t0273600-01 | Rice | mitochondrion | 10.73 | 30.5 |
| OQU91449 | Sorghum | mitochondrion | 19.05 | 30.41 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 30.1 | 30.33 |
| GSMUA_Achr10P... | Banana | nucleus | 27.76 | 30.31 |
| EES11060 | Sorghum | nucleus | 23.33 | 30.07 |
| VIT_13s0067g02430.t01 | Wine grape | extracellular | 35.35 | 29.98 |
| Os09t0314200-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 24.7 | 29.74 |
| Os01t0308300-00 | Rice | plastid | 25.91 | 29.72 |
| VIT_13s0067g02580.t01 | Wine grape | extracellular | 35.27 | 29.71 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 21.47 | 28.57 |
| OQU91451 | Sorghum | cytosol, mitochondrion | 25.18 | 28.42 |
| VIT_13s0019g00380.t01 | Wine grape | cytosol | 48.99 | 26.41 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.42 | 25.0 |
| VIT_13s0139g00130.t01 | Wine grape | cytosol | 49.72 | 23.36 |
| Os03t0579200-00 | Rice | cytosol | 23.41 | 23.27 |
| VIT_13s0064g00060.t01 | Wine grape | plasma membrane | 47.3 | 23.13 |
| Os03t0579900-01 | Rice | cytosol | 3.55 | 18.97 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ProteinID:AAM21289 | ProteinID:AAM21289.1 |
| EMBL:AF369832 | ProteinID:CCB58629 | ProteinID:CCB58629.1 | ncoils:Coil | UniProt:F6HVB7 | EMBL:FN596254 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007265 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0019888 | GO:GO:0019903 | GO:GO:0030234 | GO:GO:0043531 | GO:GO:0043666 | GO:GO:0050790 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF868 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0002108085 |
| ArrayExpress:VIT_13s0084g00420 | EnsemblPlantsGene:VIT_13s0084g00420 | EnsemblPlants:VIT_13s0084g00420.t01 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr13:+:19253628..19257741
Molecular Weight (calculated)
140040.0 Da
IEP (calculated)
6.737
GRAVY (calculated)
-0.196
Length
1239 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVVGELLLS AAFQVLFDKL ASSDFLTFAR QEHIHSQLKK WETQLFNIRE VLNDAEDKQI ASSSVKLWLA DLRILAYDME DILDEFNTEM LRRKLAVQPQ
0101: AAAASSKVWS LIPTCCTSFA PSHVTFNVSM GSKIKDITSR LEDISTRKAQ LGLEKVAGTT TTTWKRTPTT SLFNEPQVHG RDDDKNKIVD LLLSDESAVV
0201: PIVGMGGLGK TTLTRLAYND DAVVKHFSPR AWVCVSVESD VEKITKAILS DISPQSSDFN NFNRLQVELS QSLAGKRFLL VLDDVWNMNY EDWNNLRSPF
0301: RGGAKGSKVI VTTRDRGVAL IMQPSDNYHH SLEPLSDDDC WSIFVQHAFE NRDIQEHPNL KSIGKKIVEK CRGLPLAAKV LGGILRSKQR DNEWEHILNS
0401: KIWTLPDTEC GIIPALRLSY HHLPAQLKRC FVYCATFPQD YEFRETELVL LWMAEGLIQP LEGNKQMEDL GGEYFRELVS RSFFQQSGNG GSRFVMHDLI
0501: SDLAQSVAGE LCCNLEDKLK HDKNHTILQD TRHVSYNRCY FGIFKKFEAL EEVEKLRTFI VLPIYHGWGY LTSKVFSCLF PKLRYLRVLS LSGYSIKELP
0601: NSVRDLKHLR YLNLSRTAIE RLPESISELY NLQSLILCQC QYLAMLPKSI GNLVDLRHLD ITYTMSLKKM PPHLGNLVNL QTLSKFIVEK NNSSSSIKEL
0701: KKLPNIRGTL SILGLHNVAD AQDAMDVDLK GKHNIKDLTM EWGNDFDDTR NEQNEMQVLE LLQPHKNLEK LTISFYGGGI FPSWMRNPSF SLMVQLCLEG
0801: CRNCTLLPSL GQLSSLKNLR IEGMSGIKNI DVEFYGQNVE SFQSLESLTF SDMPEWEEWR SPSFIDEERL FPRLRKLTMT QCPKLAGKLP SSLSSLVKLE
0901: IVECSKLIPP LPKVLSLHEL KLKACNEEVL GRIAADFNSL AALEIGDCKE VRWLRLEKLG GLKRLKVRGC DGLVSLEEPA LPCSLEYLEI EGCENIEKLP
1001: NELQSLRSAT ELVIGKCPKL MNILEKGWPP MLRKLRVYGC EGIKALPGDW MMMRMDGDNT NSSCVLERVQ IMRCPSLLFF PKGELPTSLK QLIIEDCENV
1101: KSLPEGIMGN CNLEQLNICG CSSLTSFPSG ELPSTLKHLV ISNCGNLELL PDHMPNLTYL EIKGCKGLKH HHLQNLTSLE CLYIIGCPII ESLPEGGLPA
1201: TLGWLQIRGC PIIEKRCLKG RGEDWPRIAH IPDIHIGGN
0101: AAAASSKVWS LIPTCCTSFA PSHVTFNVSM GSKIKDITSR LEDISTRKAQ LGLEKVAGTT TTTWKRTPTT SLFNEPQVHG RDDDKNKIVD LLLSDESAVV
0201: PIVGMGGLGK TTLTRLAYND DAVVKHFSPR AWVCVSVESD VEKITKAILS DISPQSSDFN NFNRLQVELS QSLAGKRFLL VLDDVWNMNY EDWNNLRSPF
0301: RGGAKGSKVI VTTRDRGVAL IMQPSDNYHH SLEPLSDDDC WSIFVQHAFE NRDIQEHPNL KSIGKKIVEK CRGLPLAAKV LGGILRSKQR DNEWEHILNS
0401: KIWTLPDTEC GIIPALRLSY HHLPAQLKRC FVYCATFPQD YEFRETELVL LWMAEGLIQP LEGNKQMEDL GGEYFRELVS RSFFQQSGNG GSRFVMHDLI
0501: SDLAQSVAGE LCCNLEDKLK HDKNHTILQD TRHVSYNRCY FGIFKKFEAL EEVEKLRTFI VLPIYHGWGY LTSKVFSCLF PKLRYLRVLS LSGYSIKELP
0601: NSVRDLKHLR YLNLSRTAIE RLPESISELY NLQSLILCQC QYLAMLPKSI GNLVDLRHLD ITYTMSLKKM PPHLGNLVNL QTLSKFIVEK NNSSSSIKEL
0701: KKLPNIRGTL SILGLHNVAD AQDAMDVDLK GKHNIKDLTM EWGNDFDDTR NEQNEMQVLE LLQPHKNLEK LTISFYGGGI FPSWMRNPSF SLMVQLCLEG
0801: CRNCTLLPSL GQLSSLKNLR IEGMSGIKNI DVEFYGQNVE SFQSLESLTF SDMPEWEEWR SPSFIDEERL FPRLRKLTMT QCPKLAGKLP SSLSSLVKLE
0901: IVECSKLIPP LPKVLSLHEL KLKACNEEVL GRIAADFNSL AALEIGDCKE VRWLRLEKLG GLKRLKVRGC DGLVSLEEPA LPCSLEYLEI EGCENIEKLP
1001: NELQSLRSAT ELVIGKCPKL MNILEKGWPP MLRKLRVYGC EGIKALPGDW MMMRMDGDNT NSSCVLERVQ IMRCPSLLFF PKGELPTSLK QLIIEDCENV
1101: KSLPEGIMGN CNLEQLNICG CSSLTSFPSG ELPSTLKHLV ISNCGNLELL PDHMPNLTYL EIKGCKGLKH HHLQNLTSLE CLYIIGCPII ESLPEGGLPA
1201: TLGWLQIRGC PIIEKRCLKG RGEDWPRIAH IPDIHIGGN
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.