Factsheet for VIT_13s0047g00950.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g00740.t01	Wine grape	nucleus	41.78	90.63
VIT_13s0047g00730.t01	Wine grape	cytosol	67.69	85.04
VIT_13s0047g01010.t01	Wine grape	cytosol	54.67	84.41
VIT_13s0101g00300.t01	Wine grape	extracellular	78.2	78.15
VIT_18s0041g00270.t01	Wine grape	cytosol	40.04	53.54
VIT_13s0074g00130.t01	Wine grape	cytosol, nucleus, peroxisome	39.0	51.52
VIT_00s0276g00050.t01	Wine grape	cytosol	36.0	51.04
VIT_07s0141g01030.t01	Wine grape	cytosol	47.77	50.81
VIT_07s0141g00700.t01	Wine grape	cytosol	30.15	50.23
VIT_13s0139g00070.t01	Wine grape	cytosol	30.36	49.89
VIT_13s0084g00360.t01	Wine grape	plasma membrane	46.03	49.81
VIT_13s0084g00420.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.9	49.72
VIT_13s0084g00510.t01	Wine grape	cytosol	38.23	47.41
VIT_13s0067g03570.t01	Wine grape	cytosol	40.18	47.1
VIT_13s0067g03590.t01	Wine grape	cytosol	41.36	46.01
VIT_13s0139g00210.t01	Wine grape	cytosol, mitochondrion	44.5	45.58
VIT_13s0139g00220.t01	Wine grape	plasma membrane	44.22	44.53
VIT_12s0034g01660.t01	Wine grape	extracellular	27.99	43.6
VIT_13s0158g00010.t01	Wine grape	mitochondrion	34.33	43.17
VIT_13s0019g01950.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.67	42.2
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	34.19	41.97
VIT_12s0034g01070.t01	Wine grape	cytosol	26.32	41.63
VIT_12s0121g00060.t01	Wine grape	cytosol	33.01	40.62
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	38.09	40.58
VIT_12s0121g00050.t01	Wine grape	cytosol	36.28	40.48
VIT_00s0467g00010.t01	Wine grape	extracellular	36.14	40.42
VIT_13s0019g01140.t01	Wine grape	cytosol	36.98	40.17
VIT_13s0067g01100.t01	Wine grape	extracellular	25.77	39.45
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	31.69	39.33
VIT_00s0467g00030.t01	Wine grape	cytosol	35.24	39.1
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	37.47	38.68
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	35.52	37.53
KRH13246	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.91	37.35
VIT_12s0034g02500.t01	Wine grape	extracellular	35.59	37.19
VIT_19s0085g00440.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.26	37.02
VIT_13s0106g00020.t01	Wine grape	cytosol	32.59	36.56
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	27.16	33.8
GSMUA_Achr9P11390_001	Banana	extracellular	22.7	33.75
VIT_15s0024g00440.t01	Wine grape	cytosol	21.52	33.19
VIT_13s0067g02430.t01	Wine grape	extracellular	33.7	33.13
VIT_13s0067g02580.t01	Wine grape	extracellular	33.36	32.56
GSMUA_Achr6P32070_001	Banana	cytosol	24.72	32.33
VIT_15s0024g00450.t01	Wine grape	cytosol	16.71	31.41
Os04t0512900-01	Rice	nucleus	16.36	31.29
KXG34889	Sorghum	cytosol	21.1	31.17
GSMUA_Achr10P...	Banana	cytosol, golgi	16.16	31.1
Zm00001d019356_P001	Maize	cytosol	20.75	31.07
Os01t0308300-00	Rice	plastid	23.26	30.93
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	22.01	30.71
Os07t0273900-01	Rice	cytosol	15.32	30.47
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	26.04	30.41
OQU91449	Sorghum	mitochondrion	16.36	30.28
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	16.36	30.05
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	20.13	29.64
EES11060	Sorghum	nucleus	19.71	29.45
GSMUA_Achr10P...	Banana	nucleus	22.98	29.07
OQU91451	Sorghum	cytosol, mitochondrion	22.21	29.05
Os03t0579900-01	Rice	cytosol	4.53	28.02
Os07t0273600-01	Rice	mitochondrion	8.43	27.75
VIT_13s0064g00060.t01	Wine grape	plasma membrane	47.63	26.99
VIT_13s0019g00380.t01	Wine grape	cytosol	43.11	26.94
VIT_13s0139g00130.t01	Wine grape	cytosol	43.8	23.85
Os03t0579200-00	Rice	cytosol	20.61	23.76

Protein Annotations

EntrezGene:100260928	wikigene:100260928	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB52160
ProteinID:CCB52160.1	ncoils:Coil	UniProt:F6HIZ4	EMBL:FN595767	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	EntrezGene:LOC100260928	wikigene:LOC100260928	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF868	InterPro:RX-like_CC	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI0002108DC9	ArrayExpress:VIT_13s0047g00950	EnsemblPlantsGene:VIT_13s0047g00950	EnsemblPlants:VIT_13s0047g00950.t01	RefSeq:XP_003633511
RefSeq:XP_003633511.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:-:17686535..17690845

Molecular Weight (calculated)

163511.0 Da

IEP (calculated)

6.216

GRAVY (calculated)

-0.262

Length

1436 amino acids

Sequence
(BLAST)

0001: MEAVGDALLS AAIGLLFDKL ASTDLLDFAR QQWVYSDLKK WEIELSNIRE ELNDAEDKQI TDHSVKEWLG NLKDLAYDME DILDGFAYEA LQRELTAKEA
0101: DHQGRPSKVR KLISTCLGIF NPNEVMRYIN MRSKVLEITR RLRDISAQKS ELRLEKVAAI TNSARGRPVT ASLGYEPQVY GRGTEKEIII GMLLRNEPTK
0201: TNFSVVSIVA TGGMGKTTLA RLVYDDDKTV TKHFDKKAWV CVSDQFDAVR ITKTILNSVT NSQSSDSQDL HQIQENLRKE LKGKKFLIVL DDLWNDDYFE
0301: LDRLCSPFWV GAQGSKILVT TRNNNVANKM RGRKILHELK QLPYDDCLKI FQTHAFEHMN IDEHPNLESI GRRIVEKCGG SPLAARALGG LLRSELRECE
0401: WERVLYSKVW NLTDKECDII PALRLSYYHL SSHLKRCFTY CANFPQDYEF TKQELILLWI AEGLIQQSKD NRKMEDHGDK YFDELLSRSF FQSSSSNRSR
0501: FVMHDLVHAL AKSIAGDTCL HLDDELWNDL QCSISENTRH SSFTRHFCDI FKKFERFHKK EHLRTFIALP IDESTSRRHS FISNKVLEEL IPRLGHLRVL
0601: SLARYMISEI PDSFGELKHL RYLNLSYTNI KWLPDSIGNL FYLQTLKLSC CEKLIRLPIS IGNLINLRHL DVAGAKQLQE MPVQIGKLKD LRILSNFIVD
0701: KNNGLTIKGL KDMSHLRELC ISKLENVVNI QDARDADLKL KRNLESLIMQ WSSELDGSGN ERNQMDVLDS LQPCLNLNKL CIKWYGGPEF PRWIGDALFS
0801: KMVDLSLIDC RECTSLPCLG QLPSLKQLRI QGMDGVKKVG AEFYGETRVS AGKFFPSLES LHFNRMSEWE QWEDWSSSTE SLFPCLHELT IEDCPKLIMK
0901: LPTYLPSLTK LSVHFCPKLE SPLSRLPLLK GLQVKECNEA VLSSGNDLTS LTKLTISGIS GLIKLHEGFV QFLQGLRVLK VSECEELVYL WEDGFGSENS
1001: HSLEIRDCDQ LVSLGCNLQS LEISGCDKLE RLPNGWQSLT CLEELTIRDC PKLASFPDVG FPPMLRNLIL ENCEGLKSLP DGMMLKMRND STDSNNLCLL
1101: ECLSIWNCPS LICFPKGQLP TTLKSLHILH CENLKSLPEE MMGTCALEDF SIEGCPSLIG LPKGGLPATL KKLRIWSCGR LESLPEGIMH QHSTNAAALQ
1201: VLEIGECPFL TSFPRGKFQS TLERLHIGDC ERLESISEEM FHSTNNSLQS LTLRRYPNLK TLPDCLNTLT DLRIEDFENL ELLLPQIKKL TRLTSLEISH
1301: SENIKTPLSQ WGLSRLTSLK DLLISGMFPD ATSFSDDPHS IIFPTTLSSL TLLEFQNLES LASLSLQTLT SLEKLEIYSC PKLRSILPTE GLLPDTLSRL
1401: YVRDCPHLTQ RYSKEEGDDW PKIAHIPYVD IDDQSI

Best Arabidopsis Sequence Match ( AT1G58602.1 )
(BLAST)

0001: MAGELVSFAV NKLWDLLSHE YTLFQGVEDQ VAELKSDLNL LKSFLKDADA KKHTSALVRY CVEEIKDIVY DAEDVLETFV QKEKLGTTSG IRKHIKRLTC
0101: IVPDRREIAL YIGHVSKRIT RVIRDMQSFG VQQMIVDDYM HPLRNREREI RRTFPKDNES GFVALEENVK KLVGYFVEED NYQVVSITGM GGLGKTTLAR
0201: QVFNHDMVTK KFDKLAWVSV SQDFTLKNVW QNILGDLKPK EEETKEEEKK ILEMTEYTLQ RELYQLLEMS KSLIVLDDIW KKEDWEVIKP IFPPTKGWKL
0301: LLTSRNESIV APTNTKYFNF KPECLKTDDS WKLFQRIAFP INDASEFEID EEMEKLGEKM IEHCGGLPLA IKVLGGMLAE KYTSHDWRRL SENIGSHLVG
0401: GRTNFNDDNN NSCNYVLSLS FEELPSYLKH CFLYLAHFPE DYEIKVENLS YYWAAEEIFQ PRHYDGEIIR DVGDVYIEEL VRRNMVISER DVKTSRFETC
0501: HLHDMMREVC LLKAKEENFL QITSNPPSTA NFQSTVTSRR LVYQYPTTLH VEKDINNPKL RSLVVVTLGS WNMAGSSFTR LELLRVLDLV QAKLKGGKLA
0601: SCIGKLIHLR YLSLEYAEVT HIPYSLGNLK LLIYLNLHIS LSSRSNFVPN VLMGMQELRY LALPSLIERK TKLELSNLVK LETLENFSTK NSSLEDLRGM
0701: VRLRTLTIEL IEETSLETLA ASIGGLKYLE KLEIDDLGSK MRTKEAGIVF DFVHLKRLRL ELYMPRLSKE QHFPSHLTTL YLQHCRLEED PMPILEKLLQ
0801: LKELELGHKS FSGKKMVCSS CGFPQLQKLS ISGLKEWEDW KVEESSMPLL LTLNIFDCRK LKQLPDEHLP SHLTAISLKK CGLEDPIPTL ERLVHLKELS
0901: LSELCGRIMV CTGGGFPQLH KLDLSELDGL EEWIVEDGSM PRLHTLEIRR CLKLKKLPNG FPQLQNLHLT EVEEWEEGMI VKQGSMPLLH TLYIWHCPKL
1001: PGEQHFPSHL TTVFLLGMYV EEDPMRILEK LLHLKNVSLF QSFSGKRMVC SGGGFPQLQK LSIREIEWEE WIVEQGSMPL LHTLYIGVCP NLKELPDGLR
1101: FIYSLKNLIV SKRWKKRLSE GGEDYYKVQH IPSVEFDD

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q0WV58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.