Factsheet for VIT_18s0041g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0047g01010.t01	Wine grape	cytosol	39.29	45.38
VIT_13s0047g00740.t01	Wine grape	nucleus	27.56	44.71
VIT_13s0074g00130.t01	Wine grape	cytosol, nucleus, peroxisome	44.6	44.07
VIT_13s0047g00730.t01	Wine grape	cytosol	46.83	44.01
VIT_00s0276g00050.t01	Wine grape	cytosol	41.15	43.63
VIT_13s0047g00950.t01	Wine grape	cytosol	53.54	40.04
VIT_13s0101g00300.t01	Wine grape	extracellular	53.54	40.01
VIT_13s0067g03570.t01	Wine grape	cytosol	45.07	39.51
VIT_13s0084g00510.t01	Wine grape	cytosol	41.25	38.26
VIT_07s0141g01030.t01	Wine grape	cytosol	46.93	37.33
VIT_13s0084g00360.t01	Wine grape	plasma membrane	45.44	36.77
VIT_13s0084g00420.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.37	36.72
VIT_13s0139g00220.t01	Wine grape	plasma membrane	46.83	35.27
VIT_12s0034g01070.t01	Wine grape	cytosol	29.7	35.13
VIT_13s0139g00210.t01	Wine grape	cytosol, mitochondrion	45.34	34.74
VIT_12s0121g00060.t01	Wine grape	cytosol	37.71	34.7
VIT_13s0158g00010.t01	Wine grape	mitochondrion	36.78	34.59
VIT_13s0067g03590.t01	Wine grape	cytosol	41.53	34.55
VIT_12s0034g01660.t01	Wine grape	extracellular	28.21	32.86
VIT_13s0139g00070.t01	Wine grape	cytosol	26.35	32.38
VIT_07s0141g00700.t01	Wine grape	cytosol	25.51	31.79
VIT_12s0121g00050.t01	Wine grape	cytosol	37.43	31.24
VIT_00s0467g00010.t01	Wine grape	extracellular	37.24	31.15
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	38.92	31.01
VIT_00s0467g00030.t01	Wine grape	cytosol	37.06	30.76
VIT_13s0019g01950.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.22	30.34
VIT_13s0019g01140.t01	Wine grape	cytosol	37.15	30.18
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	32.12	29.49
VIT_12s0034g02500.t01	Wine grape	extracellular	37.24	29.11
KRH13246	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.45	29.11
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	31.1	28.87
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	36.5	28.84
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	37.24	28.76
VIT_13s0067g01100.t01	Wine grape	extracellular	24.86	28.46
VIT_13s0106g00020.t01	Wine grape	cytosol	32.87	27.58
VIT_19s0085g00440.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.31	26.99
VIT_15s0024g00440.t01	Wine grape	cytosol	23.28	26.85
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	27.47	25.56
GSMUA_Achr10P...	Banana	cytosol, golgi	17.69	25.47
VIT_13s0067g02580.t01	Wine grape	extracellular	34.36	25.09
VIT_13s0067g02430.t01	Wine grape	extracellular	33.99	24.98
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.5	24.04
GSMUA_Achr9P11390_001	Banana	extracellular	21.6	24.02
EES11060	Sorghum	nucleus	20.95	23.41
GSMUA_Achr6P32070_001	Banana	cytosol	23.18	22.68
Os03t0579900-01	Rice	cytosol	4.75	21.98
KXG34889	Sorghum	cytosol	19.83	21.91
Zm00001d019356_P001	Maize	cytosol	19.55	21.9
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	24.95	21.79
OQU91451	Sorghum	cytosol, mitochondrion	22.16	21.68
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	20.58	21.48
VIT_15s0024g00450.t01	Wine grape	cytosol	15.18	21.34
OQU91449	Sorghum	mitochondrion	15.36	21.26
GSMUA_Achr10P...	Banana	nucleus	22.16	20.97
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	18.9	20.82
VIT_13s0019g00380.t01	Wine grape	cytosol	43.95	20.54
VIT_13s0064g00060.t01	Wine grape	plasma membrane	47.3	20.05
Os07t0273900-01	Rice	cytosol	13.31	19.81
Os01t0308300-00	Rice	plastid	19.83	19.72
Os07t0273600-01	Rice	mitochondrion	7.91	19.5
Os04t0512900-01	Rice	nucleus	13.31	19.04
VIT_13s0139g00130.t01	Wine grape	cytosol	45.16	18.39
Os03t0579200-00	Rice	cytosol	20.2	17.42

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:CCB61740	ProteinID:CCB61740.1	UniProt:F6I417
EMBL:FN596744	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952
GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF868	SUPFAM:SSF52058	SUPFAM:SSF52540
TMHMM:TMhelix	UniParc:UPI000210A882	ArrayExpress:VIT_18s0041g00270	EnsemblPlantsGene:VIT_18s0041g00270	EnsemblPlants:VIT_18s0041g00270.t01	SEG:seg

Description

No Description!

Coordinates

chr18:+:24653492..24657134

Molecular Weight (calculated)

122656.0 Da

IEP (calculated)

7.491

GRAVY (calculated)

-0.069

Length

1074 amino acids

Sequence
(BLAST)

0001: MILREEEPTE TNVSVISIVG MGGVGKTTLA LMVYNDEETA KKFSLKAWVC VSNQYDMVRI TKTILEAVTS HSSNLQDFNQ IQRALSEALR GKRFLIVLDD
0101: LWNEDYGDWN CLRSPFWAGG KGSKIIVTTR CKGVATMMGG EKNLYELKHL SYEDCWLVFE KHAFQNRSIN LHPSLVLIGK KIVEKCAGLP LAAKALGGLL
0201: RTKLEEEEWE NILNRKVWNL QGEKCGSIIP ALRLSYNHLP SHLKRCFAYC AIFPKNYEFM VKELILLWMA EGLIQCSQDI NKQEMEDLGH DYFREMLSMS
0301: FFQPSNRNIS RFVMHDFIHD LAQFVAGEIC FHLEDRLGID CSISEKIRFS SFIRCYFDVF NKFEFFHKVG HLHTFIALPV CSSPFLPHYL SNKMLHELVP
0401: KLVTLRVILL GFGKLKNAKN ANLHLKHILE WLTVKWSAKL DDSRNKMHEM DVLNSLQPHL NLKKLSIMEY GGLKLPCWIG DSSFCKMVDV TLINCRKCIS
0501: LPCLGQLPLL KNLRIEGMEE VKKVGVEFLG GPSLSIKAFP SLESLSFVNM PKWVNWEHSS SLESYPHVQQ LTIRNCPQLI KKLPTPLPSL IKLNIWKCPQ
0601: LGIPLPSLPS LRKLDLQECN DLVVRSGIDP ISLTRFTIYG ISGFNRLHQG LMAFLPALEV LRISECGELT YLSDGSKNLL EIMDCPQLVS LEDDEEQGLP
0701: HSLQYLEIGK CDNLEKLPNG LQNLTSLEEL SIWACPKLVS FPKIDFLSML RRLIIRDCED LKSLPDGMMR NCNKNSSLCL LEYLEISFCP SLRCFPEGEL
0801: PTTLKELHIC YCKNLESLPD GVMKHDSSPQ HNTSGLQVLQ IWRCSSLKSF PRGCFPPTLK LLQIWSCSQL ELMIEKMFHD DNSLECLDVN VNSNLKSLPD
0901: CLYNLRRLQI KRCMNLKSLP HQMRNLTSLM SLEIADCGNI QTSLSKWGLS RLTSLKSFSI AGIFPEVVSF SNDPDPFLLP STLTYLSIER FKNLESLTSL
1001: ALHTLTSLQH LWISGCPKLQ SFLSREGLSD TVSQLYIRDC PLLSQRCIKE KGEDWPMISH IPYVEINRKF IFEQ

Best Arabidopsis Sequence Match ( AT1G58602.1 )
(BLAST)

0001: MAGELVSFAV NKLWDLLSHE YTLFQGVEDQ VAELKSDLNL LKSFLKDADA KKHTSALVRY CVEEIKDIVY DAEDVLETFV QKEKLGTTSG IRKHIKRLTC
0101: IVPDRREIAL YIGHVSKRIT RVIRDMQSFG VQQMIVDDYM HPLRNREREI RRTFPKDNES GFVALEENVK KLVGYFVEED NYQVVSITGM GGLGKTTLAR
0201: QVFNHDMVTK KFDKLAWVSV SQDFTLKNVW QNILGDLKPK EEETKEEEKK ILEMTEYTLQ RELYQLLEMS KSLIVLDDIW KKEDWEVIKP IFPPTKGWKL
0301: LLTSRNESIV APTNTKYFNF KPECLKTDDS WKLFQRIAFP INDASEFEID EEMEKLGEKM IEHCGGLPLA IKVLGGMLAE KYTSHDWRRL SENIGSHLVG
0401: GRTNFNDDNN NSCNYVLSLS FEELPSYLKH CFLYLAHFPE DYEIKVENLS YYWAAEEIFQ PRHYDGEIIR DVGDVYIEEL VRRNMVISER DVKTSRFETC
0501: HLHDMMREVC LLKAKEENFL QITSNPPSTA NFQSTVTSRR LVYQYPTTLH VEKDINNPKL RSLVVVTLGS WNMAGSSFTR LELLRVLDLV QAKLKGGKLA
0601: SCIGKLIHLR YLSLEYAEVT HIPYSLGNLK LLIYLNLHIS LSSRSNFVPN VLMGMQELRY LALPSLIERK TKLELSNLVK LETLENFSTK NSSLEDLRGM
0701: VRLRTLTIEL IEETSLETLA ASIGGLKYLE KLEIDDLGSK MRTKEAGIVF DFVHLKRLRL ELYMPRLSKE QHFPSHLTTL YLQHCRLEED PMPILEKLLQ
0801: LKELELGHKS FSGKKMVCSS CGFPQLQKLS ISGLKEWEDW KVEESSMPLL LTLNIFDCRK LKQLPDEHLP SHLTAISLKK CGLEDPIPTL ERLVHLKELS
0901: LSELCGRIMV CTGGGFPQLH KLDLSELDGL EEWIVEDGSM PRLHTLEIRR CLKLKKLPNG FPQLQNLHLT EVEEWEEGMI VKQGSMPLLH TLYIWHCPKL
1001: PGEQHFPSHL TTVFLLGMYV EEDPMRILEK LLHLKNVSLF QSFSGKRMVC SGGGFPQLQK LSIREIEWEE WIVEQGSMPL LHTLYIGVCP NLKELPDGLR
1101: FIYSLKNLIV SKRWKKRLSE GGEDYYKVQH IPSVEFDD

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q0WV58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.