Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68022 | Canola | cytosol | 100.0 | 100.0 |
| Bra003649.1-P | Field mustard | cytosol | 99.62 | 99.62 |
| CDX88436 | Canola | cytosol | 96.54 | 96.54 |
| AT1G78300.1 | Thale cress | cytosol | 96.15 | 96.53 |
| CDY14618 | Canola | cytosol | 96.15 | 96.15 |
| CDY12024 | Canola | cytosol | 89.62 | 89.27 |
| CDX73313 | Canola | cytosol | 87.69 | 86.04 |
| PGSC0003DMT400041810 | Potato | cytosol | 85.0 | 85.66 |
| PGSC0003DMT400060654 | Potato | cytosol | 83.46 | 85.1 |
| CDY28408 | Canola | cytosol | 85.77 | 84.79 |
| Solyc04g012120.2.1 | Tomato | extracellular, nucleus | 83.08 | 84.71 |
| CDY41483 | Canola | cytosol | 83.85 | 84.17 |
| CDX91676 | Canola | cytosol | 83.08 | 83.4 |
| CDX87455 | Canola | cytosol | 95.77 | 83.28 |
| CDY51543 | Canola | cytosol | 83.08 | 82.76 |
| CDY28698 | Canola | cytosol | 82.69 | 82.38 |
| CDX74252 | Canola | cytosol | 82.69 | 82.38 |
| CDY71290 | Canola | cytosol | 81.15 | 82.1 |
| CDY00447 | Canola | cytosol | 81.92 | 81.92 |
| CDX67405 | Canola | cytosol | 81.15 | 81.78 |
| CDX74521 | Canola | cytosol | 80.77 | 81.71 |
| CDX91996 | Canola | cytosol | 81.92 | 81.61 |
| CDY46646 | Canola | cytosol | 81.54 | 81.54 |
| CDY01659 | Canola | cytosol | 80.38 | 81.32 |
| Solyc11g010200.1.1 | Tomato | nucleus | 81.15 | 78.44 |
| CDY40098 | Canola | cytosol | 71.54 | 75.0 |
| CDX85759 | Canola | cytosol | 71.54 | 75.0 |
| CDX81287 | Canola | cytosol | 71.54 | 74.7 |
| CDY14562 | Canola | cytosol | 71.15 | 74.6 |
| CDX78381 | Canola | cytosol | 71.54 | 74.4 |
| CDX81179 | Canola | cytosol | 71.54 | 74.4 |
| CDY54716 | Canola | cytosol | 71.15 | 74.3 |
| CDY08794 | Canola | cytosol | 70.77 | 74.19 |
| CDX97016 | Canola | cytosol | 62.31 | 71.05 |
| CDY69181 | Canola | cytosol | 63.46 | 65.22 |
| CDY38227 | Canola | cytosol | 63.08 | 64.82 |
| CDY16161 | Canola | cytosol | 66.54 | 64.31 |
| CDX85023 | Canola | cytosol | 66.54 | 64.07 |
| CDY40251 | Canola | cytosol | 58.46 | 62.04 |
| Zm00001d013429_P001 | Maize | extracellular | 26.92 | 60.34 |
| CDY61201 | Canola | cytosol | 63.08 | 60.29 |
| KRH05108 | Soybean | cytosol | 36.54 | 59.75 |
| CDY42826 | Canola | cytosol | 61.92 | 59.41 |
| CDY20560 | Canola | cytosol | 58.46 | 56.93 |
| CDY48771 | Canola | cytosol | 39.23 | 56.04 |
| CDY61631 | Canola | cytosol | 66.54 | 52.74 |
| CDY24128 | Canola | cytosol | 66.15 | 52.44 |
| CDY52206 | Canola | mitochondrion | 39.62 | 52.28 |
| CDY56386 | Canola | mitochondrion | 39.62 | 52.28 |
| CDX91673 | Canola | cytosol | 50.0 | 48.33 |
| GSMUA_Achr3P17880_001 | Banana | cytosol | 32.31 | 47.73 |
| CDX87464 | Canola | cytosol | 37.69 | 46.23 |
| CDX97014 | Canola | cytosol, plastid | 19.23 | 45.45 |
| CDX88428 | Canola | cytosol | 41.54 | 44.81 |
| CDY03135 | Canola | cytosol | 58.85 | 38.83 |
| VIT_00s0199g00140.t01 | Wine grape | cytosol | 54.23 | 24.27 |
Protein Annotations
| Gene3D:1.20.190.20 | InterPro:14-3-3 | InterPro:14-3-3_CS | InterPro:14-3-3_dom_sf | InterPro:14-3-3_domain | MapMan:35.1 |
| GO:A0A078CQW5 | unigene:Bna.1296 | EnsemblPlants:CDX79255 | ProteinID:CDX79255 | ProteinID:CDX79255.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0019904 | EnsemblPlantsGene:GSBRNA2T00131882001 | InterPro:IPR036815 |
| PFAM:PF00244 | PIRSF:PIRSF000868 | PRINTS:PR00305 | ScanProsite:PS00796 | ScanProsite:PS00797 | PANTHER:PTHR18860 |
| PANTHER:PTHR18860:SF26 | SMART:SM00101 | SUPFAM:SSF48445 | UniParc:UPI00019D33CE | : | : |
Description
BnaC06g20480D
Coordinates
chrLK031817:+:778308..780039
Molecular Weight (calculated)
29200.2 Da
IEP (calculated)
4.379
GRAVY (calculated)
-0.455
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSAREEFV YMAKLAEQAE RYEEMVEFME KVSAAVDGDE LTVEERNLLS VAYKNVIGAR RASWRIISSI EQKEESRGND DHVTAIRDYR SKIETELSGI
101: CDGILKLLDS RLVPAAASGD SKVFYLKMKG DYHRYLAEFK TGQERKDAAE NTLSAYKAAQ DIANAELAPT HPIRLGLALN FSVFYYEILN SPDRACSLAK
201: QAFDDAIAEL DTLGEESYKD STLIMQLLRD NLTLWTSDMQ DDAADEIKEA SAPKPTEEQQ
101: CDGILKLLDS RLVPAAASGD SKVFYLKMKG DYHRYLAEFK TGQERKDAAE NTLSAYKAAQ DIANAELAPT HPIRLGLALN FSVFYYEILN SPDRACSLAK
201: QAFDDAIAEL DTLGEESYKD STLIMQLLRD NLTLWTSDMQ DDAADEIKEA SAPKPTEEQQ
001: MASGREEFVY MAKLAEQAER YEEMVEFMEK VSAAVDGDEL TVEERNLLSV AYKNVIGARR ASWRIISSIE QKEESRGNDD HVTAIREYRS KIETELSGIC
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
101: DGILKLLDSR LIPAAASGDS KVFYLKMKGD YHRYLAEFKT GQERKDAAEH TLAAYKSAQD IANAELAPTH PIRLGLALNF SVFYYEILNS PDRACNLAKQ
201: AFDEAIAELD TLGEESYKDS TLIMQLLRDN LTLWTSDMQD DAADEIKEAA APKPTEEQQ
Arabidopsis Description
GRF214-3-3-like protein GF14 omega [Source:UniProtKB/Swiss-Prot;Acc:Q01525]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.