Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034190.1-P | Field mustard | plastid | 94.94 | 94.94 |
| CDY22107 | Canola | plastid | 96.07 | 90.0 |
| AT4G03150.1 | Thale cress | plastid | 69.1 | 66.49 |
| PGSC0003DMT400061795 | Potato | extracellular, plastid | 46.63 | 48.26 |
| VIT_07s0104g01220.t01 | Wine grape | plastid | 48.31 | 47.78 |
| Solyc06g084470.2.1 | Tomato | plastid | 46.07 | 47.67 |
| TraesCS5B01G102100.1 | Wheat | plastid | 46.07 | 46.86 |
| Os12t0534100-01 | Rice | plastid | 44.94 | 46.51 |
| TraesCS5D01G108800.1 | Wheat | plastid | 43.82 | 44.32 |
| GSMUA_Achr2P02390_001 | Banana | plastid | 46.07 | 43.62 |
| EES17129 | Sorghum | plastid | 41.57 | 42.53 |
| KRG96366 | Soybean | cytosol | 46.07 | 39.81 |
| TraesCS5A01G096200.1 | Wheat | nucleus | 46.07 | 38.5 |
| Zm00001d023888_P001 | Maize | plastid | 38.76 | 37.91 |
| HORVU5Hr1G025950.6 | Barley | nucleus | 44.38 | 37.26 |
Protein Annotations
| EnsemblPlants:CDY21946 | EnsemblPlantsGene:GSBRNA2T00018275001 | PANTHER:PTHR36776 | PANTHER:PTHR36776:SF1 | ProteinID:CDY21946 | ProteinID:CDY21946.1 |
| UniParc:UPI0004EE710A | UniProt:A0A078G974 | MapMan:35.2 | : | : | : |
Description
BnaC09g00520DBnaC09g00520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G974]
Coordinates
chrLK032126:-:257815..258774
Molecular Weight (calculated)
20035.6 Da
IEP (calculated)
6.150
GRAVY (calculated)
-0.358
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSWVCSYVT RNVVTSDHPP QHPFSLSQHF GSPASFRRAS VKLPLTSTPK FRPLKLQKFR SLSTTHEGGE DSESVVQTLK IPDEWLLPSK AIEESEWLRV
101: TLHKWLDDEY CPEPTNVEIS NVAAKSFHTS LLEKETDMGT ILLKMAQDLT SVSYQESFHG AFTSANAAIN LIVERLES
101: TLHKWLDDEY CPEPTNVEIS NVAAKSFHTS LLEKETDMGT ILLKMAQDLT SVSYQESFHG AFTSANAAIN LIVERLES
001: MSSWVCSSVT RNVVKSHPLS LTKHLDFPAT IRRRSVSFPA TIRRRSVSFP ITSAPKFPSL KLQKSQSSIH EGEEDSESAV QALTIPEEWL LPSRAIEESE
101: WLRVTLHKWL DDEYCPEPTN VEISEVAAKS YYSSLLEKES DMGEILLKMA QDLTSISYQE SFHGAFTSAN AAINLIVDRI ETGLV
101: WLRVTLHKWL DDEYCPEPTN VEISEVAAKS YYSSLLEKES DMGEILLKMA QDLTSISYQE SFHGAFTSAN AAINLIVDRI ETGLV
Arabidopsis Description
AT4g03150/F4C21_7 [Source:UniProtKB/TrEMBL;Acc:Q944G6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.