Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 1
- nucleus 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G03150.1 | KXG27287 | AT1G71230.1 | 21798944 |
| AT4G03150.1 | EES07517 | AT3G48150.1 | 21798944 |
| AT4G03150.1 | OQU83613 | AT5G38480.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023888_P001 | Maize | plastid | 83.33 | 79.67 |
| TraesCS5D01G108800.1 | Wheat | plastid | 67.82 | 67.05 |
| Os12t0534100-01 | Rice | plastid | 63.79 | 64.53 |
| TraesCS5B01G102100.1 | Wheat | plastid | 63.79 | 63.43 |
| HORVU5Hr1G025950.6 | Barley | nucleus | 68.39 | 56.13 |
| TraesCS5A01G096200.1 | Wheat | nucleus | 61.49 | 50.23 |
| VIT_07s0104g01220.t01 | Wine grape | plastid | 45.98 | 44.44 |
| CDY21946 | Canola | plastid | 42.53 | 41.57 |
| GSMUA_Achr2P02390_001 | Banana | plastid | 44.83 | 41.49 |
| PGSC0003DMT400061795 | Potato | extracellular, plastid | 39.66 | 40.12 |
| Solyc06g084470.2.1 | Tomato | plastid | 39.66 | 40.12 |
| Bra034190.1-P | Field mustard | plastid | 40.8 | 39.89 |
| AT4G03150.1 | Thale cress | plastid | 41.95 | 39.46 |
| CDY22107 | Canola | plastid | 41.95 | 38.42 |
| KRG96366 | Soybean | cytosol | 43.68 | 36.89 |
Protein Annotations
| EnsemblPlants:EES17129 | EnsemblPlantsGene:SORBI_3008G116300 | EntrezGene:8067237 | PANTHER:PTHR36776 | PANTHER:PTHR36776:SF1 | ProteinID:EES17129 |
| ProteinID:EES17129.1 | RefSeq:XP_002443291.1 | UniParc:UPI0001A8855E | UniProt:C5YPB8 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr8:-:52638040..52642901
Molecular Weight (calculated)
19231.5 Da
IEP (calculated)
5.255
GRAVY (calculated)
-0.409
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSTSFGAL LLHGRLHSPS LPSKAQLFLA LPNNPTRFRT SASVRVDAYP PRWPLRAADG ERDNRVQELR VPDSWLTPAG AAQESEWLRE TLHKWLDDEY
101: CPEPANVDIS STAAGSYHES LIAGQSDLGE ILLKMVGDLD KLSYRESFHG PFSAANAAVR LISQRMESLS LPDE
101: CPEPANVDIS STAAGSYHES LIAGQSDLGE ILLKMVGDLD KLSYRESFHG PFSAANAAVR LISQRMESLS LPDE
001: MSSWVCSSVT RNVVKSHPLS LTKHLDFPAT IRRRSVSFPA TIRRRSVSFP ITSAPKFPSL KLQKSQSSIH EGEEDSESAV QALTIPEEWL LPSRAIEESE
101: WLRVTLHKWL DDEYCPEPTN VEISEVAAKS YYSSLLEKES DMGEILLKMA QDLTSISYQE SFHGAFTSAN AAINLIVDRI ETGLV
101: WLRVTLHKWL DDEYCPEPTN VEISEVAAKS YYSSLLEKES DMGEILLKMA QDLTSISYQE SFHGAFTSAN AAINLIVDRI ETGLV
Arabidopsis Description
AT4g03150/F4C21_7 [Source:UniProtKB/TrEMBL;Acc:Q944G6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.