Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034190.1-P | Field mustard | plastid | 68.11 | 70.79 |
| CDY21946 | Canola | plastid | 66.49 | 69.1 |
| CDY22107 | Canola | plastid | 67.57 | 65.79 |
| VIT_07s0104g01220.t01 | Wine grape | plastid | 47.57 | 48.89 |
| Os12t0534100-01 | Rice | plastid | 43.24 | 46.51 |
| PGSC0003DMT400061795 | Potato | extracellular, plastid | 43.24 | 46.51 |
| Solyc06g084470.2.1 | Tomato | plastid | 42.16 | 45.35 |
| TraesCS5B01G102100.1 | Wheat | plastid | 42.16 | 44.57 |
| TraesCS5D01G108800.1 | Wheat | plastid | 41.62 | 43.75 |
| GSMUA_Achr2P02390_001 | Banana | plastid | 43.24 | 42.55 |
| EES17129 | Sorghum | plastid | 39.46 | 41.95 |
| KRG96366 | Soybean | cytosol | 43.24 | 38.84 |
| Zm00001d023888_P001 | Maize | plastid | 37.84 | 38.46 |
| HORVU5Hr1G025950.6 | Barley | nucleus | 41.08 | 35.85 |
| TraesCS5A01G096200.1 | Wheat | nucleus | 40.0 | 34.74 |
Protein Annotations
| MapMan:35.2 | EntrezGene:828059 | UniProt:A0A178V115 | ProteinID:AEE82279.1 | EMBL:AF428466 | ArrayExpress:AT4G03150 |
| EnsemblPlantsGene:AT4G03150 | RefSeq:AT4G03150 | TAIR:AT4G03150 | RefSeq:AT4G03150-TAIR-G | EnsemblPlants:AT4G03150.1 | TAIR:AT4G03150.1 |
| EMBL:AY125546 | GO:GO:0008150 | RefSeq:NP_567252.1 | ProteinID:OAO99370.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR36776 | PANTHER:PTHR36776:SF1 | UniProt:Q944G6 | UniParc:UPI00000A4235 |
Description
AT4g03150/F4C21_7 [Source:UniProtKB/TrEMBL;Acc:Q944G6]
Coordinates
chr4:-:1393614..1394583
Molecular Weight (calculated)
20785.6 Da
IEP (calculated)
5.316
GRAVY (calculated)
-0.259
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSWVCSSVT RNVVKSHPLS LTKHLDFPAT IRRRSVSFPA TIRRRSVSFP ITSAPKFPSL KLQKSQSSIH EGEEDSESAV QALTIPEEWL LPSRAIEESE
101: WLRVTLHKWL DDEYCPEPTN VEISEVAAKS YYSSLLEKES DMGEILLKMA QDLTSISYQE SFHGAFTSAN AAINLIVDRI ETGLV
101: WLRVTLHKWL DDEYCPEPTN VEISEVAAKS YYSSLLEKES DMGEILLKMA QDLTSISYQE SFHGAFTSAN AAINLIVDRI ETGLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.