CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20604	Canola	plastid	96.65	14.7
Bra018423.1-P	Field mustard	plastid	97.13	14.55
CDY20967	Canola	plastid	94.74	14.43
CDY34849	Canola	plastid	91.39	13.84
CDY66790	Canola	plastid	89.95	13.62
Os06t0474866-00	Rice	cytosol	5.26	13.25
AT1G10760.1	Thale cress	cytosol, plastid	87.08	13.01
TraesCS1A01G346200.1	Wheat	cytosol, plastid	63.16	12.11
HORVU1Hr1G082220.10	Barley	cytosol	63.64	10.92
TraesCS1B01G359800.1	Wheat	mitochondrion	63.64	10.75
CDY28368	Canola	nucleus	19.14	10.53
TraesCS1D01G348900.2	Wheat	plastid	64.59	10.36
CDY16889	Canola	cytosol, mitochondrion	18.66	10.16
VIT_01s0127g00060.t01	Wine grape	plastid	71.29	10.14
KRH45621	Soybean	nucleus	70.33	10.08
KRG99404	Soybean	mitochondrion	69.86	10.01
CDY16527	Canola	nucleus	18.66	9.68
Os06t0498400-01	Rice	mitochondrion	65.07	9.62
TraesCS7A01G235200.4	Wheat	plastid	66.51	9.59
TraesCS7B01G133400.1	Wheat	plastid	66.51	9.57
Solyc05g005020.2.1	Tomato	plastid	66.99	9.56
TraesCS7D01G235200.1	Wheat	plastid	65.55	9.43
HORVU7Hr1G048330.1	Barley	cytosol	66.99	9.37
PGSC0003DMT400019845	Potato	cytosol	65.07	9.29
EER89786	Sorghum	plastid	65.07	9.26
CDX99058	Canola	nucleus	18.66	9.24
Zm00001d037059_P005	Maize	plastid	64.11	9.12
CDY56650	Canola	nucleus	17.22	8.47
GSMUA_Achr3P14470_001	Banana	endoplasmic reticulum, plasma membrane, plastid	63.64	8.26
CDY56576	Canola	plastid	43.54	6.25
CDY61008	Canola	plastid	42.58	5.98
CDY24839	Canola	nucleus	1.91	3.77
CDY08936	Canola	nucleus	1.91	3.77
CDY19771	Canola	plastid	20.1	3.56
CDX87051	Canola	plastid	19.62	3.47
CDY05529	Canola	plastid	19.62	3.12
CDY65142	Canola	plastid	19.62	3.12

Protein Annotations

EnsemblPlants:CDY68027	EnsemblPlantsGene:GSBRNA2T00069122001	GO:A0A078JRH2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	PANTHER:PTHR22931	PANTHER:PTHR22931:SF1	ProteinID:CDY68027	ProteinID:CDY68027.1
SEG:seg	UniParc:UPI0004EE84D4	UniProt:A0A078JRH2	MapMan:3.2.3.1.1	:	:

Description

BnaAnng25950DBnaAnng25950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRH2]

Coordinates

chrLK036785:-:4995..6284

Molecular Weight (calculated)

22774.1 Da

IEP (calculated)

4.966

GRAVY (calculated)

-0.278

Length

209 amino acids

Sequence
(BLAST)

001: MPDVLSHVSV RARNGKICFA TCFDSGILSD LQAMDGKVLS LKPTSADVVY REVSESELSS QSSDNLEDVP PPSISLVKKQ FVGRYAISSE EFTNDLVGAK
101: SRNIGYLKGK VPSWVGIPTS VALPFGVFEK VLSEKANQAV SEKLQVLKKS LDEGDQGALG EIRKTVLGPV APSELVEELK STMRSSDMPW PGDESEQRWE
201: QAWSAIKKV

Best Arabidopsis Sequence Match ( AT1G10760.1 )
(BLAST)

0001: MSNSVVHNLL NRGLIRPLNF EHQNKLNSSV YQTSTANPAL GKIGRSKLYG KGLKQAGRSL VTETGGRPLS FVPRAVLAMD PQAAEKFSLD GNIDLLVEVT
0101: STTVREVNIQ IAYTSDTLFL HWGAILDNKE NWVLPSRSPD RTQNFKNSAL RTPFVKSGGN SHLKLEIDDP AIHAIEFLIF DESRNKWYKN NGQNFHINLP
0201: TERNVKQNVS VPEDLVQIQA YLRWERKGKQ MYNPEKEKEE YEAARTELRE EMMRGASVED LRAKLLKKDN SNESPKSNGT SSSGREEKKK VSKQPERKKN
0301: YNTDKIQRKG RDLTKLIYKH VADFVEPESK SSSEPRSLTT LEIYAKAKEE QETTPVFSKK TFKLEGSAIL VFVTKLSGKT KIHVATDFKE PVTLHWALSQ
0401: KGGEWLDPPS DILPPNSLPV RGAVDTKLTI TSTDLPSPVQ TFELEIEGDS YKGMPFVLNA GERWIKNNDS DFYVDFAKEE KHVQKDYGDG KGTAKHLLDK
0501: IADLESEAQK SFMHRFNIAA DLVDEAKSAG QLGFAGILVW MRFMATRQLV WNKNYNVKPR EISKAQDRLT DLLQDVYASY PEYRELLRMI MSTVGRGGEG
0601: DVGQRIRDEI LVIQRKNDCK GGIMEEWHQK LHNNTSPDDV VICQALMDYI KSDFDLSVYW KTLNDNGITK ERLLSYDRAI HSEPNFRGEQ KDGLLRDLGH
0701: YMRTLKAVHS GADLESAIQN CMGYQDDGEG FMVGVQINPV SGLPSGYPDL LRFVLEHVEE KNVEPLLEGL LEARQELRPL LLKSHDRLKD LLFLDLALDS
0801: TVRTAIERGY EQLNDAGPEK IMYFISLVLE NLALSSDDNE DLIYCLKGWQ FALDMCKSKK DHWALYAKSV LDRSRLALAS KAERYLEILQ PSAEYLGSCL
0901: GVDQSAVSIF TEEIIRAGSA AALSSLVNRL DPVLRKTANL GSWQVISPVE VVGYVIVVDE LLTVQNKTYD RPTIIVANRV RGEEEIPDGA VAVLTPDMPD
1001: VLSHVSVRAR NGKICFATCF DSGILSDLQG KDGKLLSLQP TSADVVYKEV NDSELSSPSS DNLEDAPPSI SLVKKQFAGR YAISSEEFTS DLVGAKSRNI
1101: GYLKGKVPSW VGIPTSVALP FGVFEKVISE KANQAVNDKL LVLKKTLDEG DQGALKEIRQ TLLGLVAPPE LVEELKSTMK SSDMPWPGDE GEQRWEQAWA
1201: AIKKVWASKW NERAYFSTRK VKLDHDYLCM AVLVQEVINA DYAFVIHTTN PSSGDSSEIY AEVVKGLGET LVGAYPGRSL SFICKKNNLD SPLVLGYPSK
1301: PIGLFIRRSI IFRSDSNGED LEGYAGAGLY DSVPMDEEDQ VVLDYTTDPL ITDLSFQKKV LSDIARAGDA IEKLYGTAQD IEGVIRDGKL YVVQTRPQV

Arabidopsis Description

GWD1Alpha-glucan water dikinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAC6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.