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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY19771 Canola plastid 96.36 96.61
AT5G26570.1 Thale cress plastid 85.62 84.62
CDY05529 Canola plastid 82.74 74.54
CDY65142 Canola plastid 82.06 73.76
KRG93123 Soybean cytosol 18.44 71.95
VIT_05s0062g00890.t01 Wine grape cytosol 55.58 69.3
GSMUA_Achr9P07400_001 Banana endoplasmic reticulum, plasma membrane 46.95 64.01
KRH36357 Soybean plastid 60.32 61.62
HORVU7Hr1G008070.7 Barley mitochondrion 56.77 58.76
Solyc09g098040.2.1 Tomato plastid 59.14 58.35
TraesCS4A01G444300.1 Wheat plastid 57.95 58.25
PGSC0003DMT400042818 Potato cytosol 59.05 58.07
TraesCS7A01G043700.1 Wheat plastid 57.61 57.71
TraesCS7D01G039500.4 Wheat plastid 57.36 57.56
Zm00001d023792_P005 Maize cytosol 53.3 56.1
Os12t0297500-01 Rice plastid 56.85 55.72
KXG29990 Sorghum plastid 56.85 55.22
VIT_05s0062g00900.t01 Wine grape plastid 8.63 37.09
CDY16889 Canola cytosol, mitochondrion 7.11 21.88
CDY28368 Canola nucleus 6.68 20.79
CDY68027 Canola cytosol, plastid 3.47 19.62
CDX99058 Canola nucleus 6.68 18.72
CDY56650 Canola nucleus 6.68 18.59
CDY16527 Canola nucleus 6.18 18.11
CDY34849 Canola plastid 17.77 15.22
CDY24839 Canola nucleus 1.35 15.09
CDY08936 Canola nucleus 1.35 15.09
CDY66790 Canola plastid 17.43 14.93
CDY20604 Canola plastid 17.26 14.85
CDY20967 Canola plastid 17.09 14.72
CDY56576 Canola plastid 17.34 14.08
CDY61008 Canola plastid 17.17 13.64
Protein Annotations
Gene3D:2.60.40.10MapMan:3.2.3.1.2Gene3D:3.30.1490.20Gene3D:3.30.470.20GO:A0A078DCR5InterPro:ATP_grasp_subdomain_1
InterPro:CBM20_water_dikinaseInterPro:CBM_fam20EnsemblPlants:CDX87051ProteinID:CDX87051ProteinID:CDX87051.1InterPro:Carb-bd-like_fold
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0030246
GO:GO:2001070EnsemblPlantsGene:GSBRNA2T00145938001InterPro:IPR002044InterPro:IPR013783InterPro:IPR013815InterPro:Ig-like_fold
PFAM:PF00686PFAM:PF01326InterPro:PPDK_PEP-bdPFscan:PS51166PANTHER:PTHR22931PANTHER:PTHR22931:SF2
SMART:SM01065SUPFAM:SSF49452SUPFAM:SSF56059UniParc:UPI0004EDFB4FSEG:seg:
Description
BnaC09g03660D
Coordinates
chrLK031849:-:176010..181312
Molecular Weight (calculated)
129133.0 Da
IEP (calculated)
5.731
GRAVY (calculated)
-0.287
Length
1182 amino acids
Sequence
(BLAST)
0001: MESIGSHFHG SPFTFTTTRN SSLPSLVHFT RRAAHLPRRS DRLKISPSRL TCCCSASSSS SSTTIEEQRK NRDGSGGKVK LNVRLDRQVK FGEHVAMFGS
0101: AKEIGCWKEK SPLAWSEKGW VCELELSGGE ALEFKFVVVK KDGSLSWESG DNRVLKLPDS GSFSVVCHWD ATGEALDLPL VDDDAGGEES GDSYDVGGDN
0201: GVQLRKSTLG GQWQGKDASF MRSNEHGSRE VGRNWDASGL EGSALKMVEG DRSSRNWRKK LELVSEVIVG SVEREERLKA LIYSAVYLKW INTGQIPCFE
0301: DGGHHRPNHH AEISRLIFRE LENICSKKDA TAEEVLVARK IHPCLPSFKA EFTASVPLTR IRDIAHRNDI PHDLKQEIKH TIQNKLHRNA GPEDLIATEA
0401: MLERITETPG KYSGDFVEQF RIFHNELKDF FNAGSLTEQL ESMKISMDER GLSALKLFFE CKERLDASGE SSNVLELVKT MQSLASLRET IIKELNSGLR
0501: NDAPDAAIAM RQKWRLCEIG LEDYFFVLLS RFLNALESMG GAVQLAKDVE SRSVASWKDP LDALVLGVQQ VGLSGWKQEE CLAIGNELLA WRERDLLEKE
0601: GEEDGKTIWA MRLKASLDRA RRLTSEYSDL LLQIFPPNVE ILGRALGIPE NSVKTYTEAE IRAGIIFQIS KLCTVLLKAV RNSLGSEGWD VIVPGSTSGT
0701: LVQVQSIVPG SLPSTGGGPI ILLVNKADGD EEVSAANGNI AGVMLLQELP HLSHLGEKIV FVTCDDDDKV ADIRRLVGKY VRLEASPSHV NLILSTEDSS
0801: RTPKSKSKSK SNAKKKTDKK SVSKDDEESK PLSSSSESLL YSSKDIPSGG IIELADSDAS TSGSKAAACG LLASLAAAST RVDSENGVPA SFKVPAGVVI
0901: PFGSMELALK QSNSEEKFAP LLEKLETARP EGGELDSICD QIHEVMKSLQ VPKETINTIS KAFPKDARLI VRSSANVEDL AGMSAAGLYE SIPNVSPSDP
1001: LVFSDSICQV WASLYTRRAV LSRRAAGVSQ REASMAVLVQ EMLSPDLSFV LHTVSPADPD SNLVEAEIAP GLGETLASGT RGTPWRLASG KLDGIVETLA
1101: FANFSEELLV SGKGPADGKY VRLTVDYSKK RLTVDSVFRQ KLGQRLGSVG FFLERNFGCA QDVEGCLVGE DVYIVQSRPQ PL
Best Arabidopsis Sequence Match ( AT5G26570.1 )
(BLAST)
0001: MESIGSHCCS SPFTFITRNS SSSLPRLVNI THRVNLSHQS HRLRNSNSRL TCTATSSSTI EEQRKKKDGS GTKVRLNVRL DHQVNFGDHV AMFGSAKEIG
0101: SWKKKSPLNW SENGWVCELE LDGGQVLEYK FVIVKNDGSL SWESGDNRVL KVPNSGNFSV VCHWDATRET LDLPQEVGND DDVGDGGHER DNHDVGDDRV
0201: VGSENGAQLQ KSTLGGQWQG KDASFMRSND HGNREVGRNW DTSGLEGTAL KMVEGDRNSK NWWRKLEMVR EVIVGSVERE ERLKALIYSA IYLKWINTGQ
0301: IPCFEDGGHH RPNRHAEISR LIFRELEHIC SKKDATPEEV LVARKIHPCL PSFKAEFTAA VPLTRIRDIA HRNDIPHDLK QEIKHTIQNK LHRNAGPEDL
0401: IATEAMLQRI TETPGKYSGD FVEQFKIFHN ELKDFFNAGS LTEQLDSMKI SMDDRGLSAL NLFFECKKRL DTSGESSNVL ELIKTMHSLA SLRETIIKEL
0501: NSGLRNDAPD TAIAMRQKWR LCEIGLEDYF FVLLSRFLNA LETMGGADQL AKDVGSRNVA SWNDPLDALV LGVHQVGLSG WKQEECLAIG NELLAWRERD
0601: LLEKEGEEDG KTIWAMRLKA TLDRARRLTA EYSDLLLQIF PPNVEILGKA LGIPENSVKT YTEAEIRAGI IFQISKLCTV LLKAVRNSLG SEGWDVVVPG
0701: STSGTLVQVE SIVPGSLPAT SGGPIILLVN KADGDEEVSA ANGNIAGVML LQELPHLSHL GVRARQEKIV FVTCDDDDKV ADIRRLVGKF VRLEASPSHV
0801: NLILSTEGRS RTSKSSATKK TDKNSLSKKK TDKKSLSIDD EESKPGSSSS NSLLYSSKDI PSGGIIALAD ADVPTSGSKS AACGLLASLA EASSKVHSEH
0901: GVPASFKVPT GVVIPFGSME LALKQNNSEE KFASLLEKLE TARPEGGELD DICDQIHEVM KTLQVPKETI NSISKAFLKD ARLIVRSSAN VEDLAGMSAA
1001: GLYESIPNVS PSDPLVFSDS VCQVWASLYT RRAVLSRRAA GVSQREASMA VLVQEMLSPD LSFVLHTVSP ADPDSNLVEA EIAPGLGETL ASGTRGTPWR
1101: LASGKLDGIV QTLAFANFSE ELLVSGTGPA DGKYVRLTVD YSKKRLTVDS VFRQQLGQRL GSVGFFLERN FGCAQDVEGC LVGEDVYIVQ SRPQPL
Arabidopsis Description
GWD3Phosphoglucan, water dikinase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6ZY51]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.