CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020538.1-P	Field mustard	plastid	81.25	92.62
CDY65142	Canola	plastid	91.31	91.1
CDX87051	Canola	plastid	74.54	82.74
CDY19771	Canola	plastid	74.09	82.44
AT5G26570.1	Thale cress	plastid	73.55	80.69
KRG93123	Soybean	cytosol	16.39	70.96
VIT_05s0062g00890.t01	Wine grape	cytosol	50.38	69.73
GSMUA_Achr9P07400_001	Banana	endoplasmic reticulum, plasma membrane	42.45	64.24
KRH36357	Soybean	plastid	54.57	61.88
PGSC0003DMT400042818	Potato	cytosol	53.51	58.4
Solyc09g098040.2.1	Tomato	plastid	53.12	58.18
HORVU7Hr1G008070.7	Barley	mitochondrion	50.46	57.97
TraesCS4A01G444300.1	Wheat	plastid	50.99	56.89
TraesCS7D01G039500.4	Wheat	plastid	50.76	56.54
TraesCS7A01G043700.1	Wheat	plastid	50.76	56.44
Zm00001d023792_P005	Maize	cytosol	47.56	55.57
Os12t0297500-01	Rice	plastid	50.84	55.31
KXG29990	Sorghum	plastid	50.61	54.56
VIT_05s0062g00900.t01	Wine grape	plastid	7.24	34.55
CDY16889	Canola	cytosol, mitochondrion	6.17	21.09
CDY28368	Canola	nucleus	5.79	20.0
CDY68027	Canola	cytosol, plastid	3.12	19.62
CDY56650	Canola	nucleus	6.1	18.82
CDX99058	Canola	nucleus	6.02	18.72
CDY16527	Canola	nucleus	5.56	18.11
CDY24839	Canola	nucleus	1.3	16.04
CDY08936	Canola	nucleus	1.3	16.04
CDY34849	Canola	plastid	15.78	15.0
CDY20967	Canola	plastid	15.4	14.72
CDY66790	Canola	plastid	15.47	14.71
CDY20604	Canola	plastid	15.4	14.7
CDY56576	Canola	plastid	15.32	13.8
CDY61008	Canola	plastid	15.32	13.51

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.3.1.2	Gene3D:3.30.1490.20	Gene3D:3.30.470.20	Gene3D:3.40.50.2300	GO:A0A078EY92
InterPro:ATP_grasp_subdomain_1	InterPro:CBM20_water_dikinase	InterPro:CBM_fam20	EnsemblPlants:CDY05529	ProteinID:CDY05529	ProteinID:CDY05529.1
InterPro:Carb-bd-like_fold	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0030246	GO:GO:2001070
EnsemblPlantsGene:GSBRNA2T00120470001	InterPro:IPR001789	InterPro:IPR002044	InterPro:IPR013783	InterPro:IPR013815	InterPro:Ig-like_fold
PFAM:PF00072	PFAM:PF00686	PFAM:PF01326	InterPro:PPDK_PEP-bd	PFscan:PS50110	PFscan:PS51166
PANTHER:PTHR22931	PANTHER:PTHR22931:SF2	SMART:SM00448	SMART:SM01065	SUPFAM:SSF49452	SUPFAM:SSF52172
SUPFAM:SSF56059	InterPro:Sig_transdc_resp-reg_receiver	UniParc:UPI0004EF39B4	SEG:seg	:	:

Description

BnaA02g31620D

Coordinates

chrLK031962:-:681908..689413

Molecular Weight (calculated)

144607.0 Da

IEP (calculated)

5.411

GRAVY (calculated)

-0.238

Length

1312 amino acids

Sequence
(BLAST)

0001: MESIGSHCYT SPFASITRNS SLPRLLHFTP RAIHIRSQSD SRRLLTCSAS SSTIEEHRKN KDGSGPSRKK VKLNVRLNHQ VKFGEHVAIF GSAEEIGSWK
0101: EKSPLTWTET GWVCELHLNG DQALEFKFVI VKTDGSLSWE SGDNRVLNLP KSGAFSVVCH WDATREALDV VSQEEVGEGE SSENGAQLRK SALAGEWKGK
0201: EASFMSSNEH GDREVGRSWD TSGLEGPGLK MVEGDRNSRN WWRKLEMVRE VIVGSVEREE RLKALIYSAV YLKWINTGQI PCFEDGGHHR PNRHAEISRL
0301: IFRELENICS KKDATAEEVL VARKIHLCLP SFKAEFTASV PLTRIRDIAH RNDIPHDLKQ EIKHTIQNKL HRNAGPEDLI ATEAMLERIT ETPGKYSGDF
0401: VEQFKIFHNE LKDFFNAGSL TEQLDSMKVS MDERGLSALT LFLECKERLD ASGESSNVLE LIKTMHSLAS LRETIVKELN SGLRNDAPDA AIAMRQKWRL
0501: CEIGLEDYFF VLLSSRFLNA VETMGGAVKL AKDVGSKDVS SWNDPLDALV LGVHQVGLSG WKQEECLAIG NELLAWRERD LLEKEGEEDG KTIWAMRLKA
0601: TLDRARRLTA EYSDLLLQIF PSNVEILGRA LGIPENSVKT YTEAEIRAGI IFQISKLCTV LLKAVRNTLG SEGWDVIVPG STSGTLVQVD SIVPGSLPST
0701: DGGPVILLVN KADGDEEVSA ANGNIAGVML LQELPHLSHL GEKIVFVTCD DDEKVAEIRR LVGKYVSLEA SPSNVNLILS TEDNKRTDKK SVSVDDEESK
0801: PVSSSSNRLL YSSKDIPSGG IITLADSDVS TCGSKAAACG LLASLAAAST RVHSEHGVPA SFKVPTGVVI PFGSMELALK QSNSEEKFTS LLEKLETATP
0901: QDGELDSICD QIHKVMESLQ VPKETINSIS KAFPKDTRLI VRSSANVEDL AGMSAAGLYE SIPNVSPSDP SVFSASVCRV WASLYTRRAV LSRRAAGVSQ
1001: IEASMAVLVQ EMLSPDLSFV LHTVSPSDPG TNLVEAEIAP GLGETLASGT RGTPWRLASG KLDGIVQTLA FANFSEELLV SGKGPADGKY VRLTVDYSKK
1101: RLTVDSVFRQ RLGQRLGSVG FFLERNFGCA QDVEGCLVGE DVYIVQSRPQ PLDCNEFFRF HHKHICLEVY NIFLEVFEMA GEVPNLEASK LTALVVDDNF
1201: VNQSVHHKLL DRLGIKNDVV SNGQEAVDVH CSGRNYDLIL MDMDMPIMNG IQATRRLREM GIESKIAGVT TRAEEEEVKE FMEAGLNDFQ EKPLTISKLV
1301: SILHNLELYV QT

Best Arabidopsis Sequence Match ( AT5G26570.1 )
(BLAST)

0001: MESIGSHCCS SPFTFITRNS SSSLPRLVNI THRVNLSHQS HRLRNSNSRL TCTATSSSTI EEQRKKKDGS GTKVRLNVRL DHQVNFGDHV AMFGSAKEIG
0101: SWKKKSPLNW SENGWVCELE LDGGQVLEYK FVIVKNDGSL SWESGDNRVL KVPNSGNFSV VCHWDATRET LDLPQEVGND DDVGDGGHER DNHDVGDDRV
0201: VGSENGAQLQ KSTLGGQWQG KDASFMRSND HGNREVGRNW DTSGLEGTAL KMVEGDRNSK NWWRKLEMVR EVIVGSVERE ERLKALIYSA IYLKWINTGQ
0301: IPCFEDGGHH RPNRHAEISR LIFRELEHIC SKKDATPEEV LVARKIHPCL PSFKAEFTAA VPLTRIRDIA HRNDIPHDLK QEIKHTIQNK LHRNAGPEDL
0401: IATEAMLQRI TETPGKYSGD FVEQFKIFHN ELKDFFNAGS LTEQLDSMKI SMDDRGLSAL NLFFECKKRL DTSGESSNVL ELIKTMHSLA SLRETIIKEL
0501: NSGLRNDAPD TAIAMRQKWR LCEIGLEDYF FVLLSRFLNA LETMGGADQL AKDVGSRNVA SWNDPLDALV LGVHQVGLSG WKQEECLAIG NELLAWRERD
0601: LLEKEGEEDG KTIWAMRLKA TLDRARRLTA EYSDLLLQIF PPNVEILGKA LGIPENSVKT YTEAEIRAGI IFQISKLCTV LLKAVRNSLG SEGWDVVVPG
0701: STSGTLVQVE SIVPGSLPAT SGGPIILLVN KADGDEEVSA ANGNIAGVML LQELPHLSHL GVRARQEKIV FVTCDDDDKV ADIRRLVGKF VRLEASPSHV
0801: NLILSTEGRS RTSKSSATKK TDKNSLSKKK TDKKSLSIDD EESKPGSSSS NSLLYSSKDI PSGGIIALAD ADVPTSGSKS AACGLLASLA EASSKVHSEH
0901: GVPASFKVPT GVVIPFGSME LALKQNNSEE KFASLLEKLE TARPEGGELD DICDQIHEVM KTLQVPKETI NSISKAFLKD ARLIVRSSAN VEDLAGMSAA
1001: GLYESIPNVS PSDPLVFSDS VCQVWASLYT RRAVLSRRAA GVSQREASMA VLVQEMLSPD LSFVLHTVSP ADPDSNLVEA EIAPGLGETL ASGTRGTPWR
1101: LASGKLDGIV QTLAFANFSE ELLVSGTGPA DGKYVRLTVD YSKKRLTVDS VFRQQLGQRL GSVGFFLERN FGCAQDVEGC LVGEDVYIVQ SRPQPL

Arabidopsis Description

GWD3Phosphoglucan, water dikinase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6ZY51]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.