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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023792_P005 Maize cytosol 80.94 87.71
Os12t0297500-01 Rice plastid 72.72 73.38
HORVU7Hr1G008070.7 Barley mitochondrion 68.61 73.12
TraesCS4A01G444300.1 Wheat plastid 69.19 71.6
TraesCS7D01G039500.4 Wheat plastid 69.02 71.31
TraesCS7A01G043700.1 Wheat plastid 68.94 71.1
GSMUA_Achr9P07400_001 Banana endoplasmic reticulum, plasma membrane 49.79 69.9
KRG93123 Soybean cytosol 16.93 67.99
VIT_05s0062g00890.t01 Wine grape cytosol 52.1 66.88
Solyc09g098040.2.1 Tomato plastid 58.67 59.6
KRH36357 Soybean plastid 56.29 59.2
PGSC0003DMT400042818 Potato cytosol 58.18 58.9
Bra036577.1-P Field mustard plastid 56.29 57.85
Bra020538.1-P Field mustard plastid 54.56 57.69
CDY19771 Canola plastid 55.88 57.68
CDX87051 Canola plastid 55.22 56.85
AT5G26570.1 Thale cress plastid 55.38 56.35
CDY65142 Canola plastid 55.14 51.03
CDY05529 Canola plastid 54.56 50.61
VIT_05s0062g00900.t01 Wine grape plastid 7.64 33.82
EER89786 Sorghum plastid 18.82 15.59
Protein Annotations
Gene3D:2.60.40.10MapMan:3.2.3.1.2Gene3D:3.30.1490.20Gene3D:3.30.470.20UniProt:A0A194YQ92InterPro:ATP_grasp_subdomain_1
InterPro:CBM_fam20InterPro:Carb-bd-like_foldGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005975
GO:GO:0005982GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009507GO:GO:0009536
GO:GO:0009570GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019200
GO:GO:0019538GO:GO:0030246GO:GO:0046777GO:GO:0046835GO:GO:0051752GO:GO:2001070
InterPro:IPR002044InterPro:IPR013783InterPro:IPR013815InterPro:Ig-like_foldEnsemblPlants:KXG29990ProteinID:KXG29990
ProteinID:KXG29990.1PFAM:PF00686PFAM:PF01326InterPro:PPDK_PEP-bdPFscan:PS51166PANTHER:PTHR22931
PANTHER:PTHR22931:SF2SMART:SM01065EnsemblPlantsGene:SORBI_3004G120100SUPFAM:SSF49452SUPFAM:SSF56059UniParc:UPI0007F29028
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:-:12982514..13024856
Molecular Weight (calculated)
133557.0 Da
IEP (calculated)
5.513
GRAVY (calculated)
-0.255
Length
1217 amino acids
Sequence
(BLAST)
0001: MASLRPFDPS LAARPGPPPP ARPAARRPVP APPLAAPFAS ALIFPVRPRI PGRTRGTGVA ASTKHITRTK EEKQTDPSKQ DIVRLHVCLD HQVMFGEHVG
0101: IIGSAKELGS WKSPVEMDWT PNGWVCQLDL PGETLLEFKF VVFLNRGKDK IWEDGDNRVV NLPKNGSFDM ACHWNKTKEP LNLLGTSEIK LSGDTEKEKD
0201: EDAKLSRNIA LEEMGNISNA GDGDLTPKLE SSTLGGLWQG SDTVFMRSNE HRNNESDRKW DMTGLDAVSL KLVEGDKASR NWWRKLELVR GLVSEYVHDQ
0301: SHLEALTYSA IYLKWIYTGQ IPCFEDGGHH RPNKHAEISR QIFREIERIY YGENTSAQDL LVIRKIHPCL PSFKSEFTAS VPLTRIRDIA HRNDIPHDLK
0401: QEIKHTIQNK LHRNAGPEDL IATEAMLARI TKTPGEYSEA FVEQFKTFYS ELKDFFNAGS LLEQVQSIEQ SLDESGLEAL SSFLKTKKNL DQLEDAKDLD
0501: ENGGVQVLLK TLLSLSYLRS ILMKGLESGL RNDAPDSAIA MRQKWRLCEI GLEDYSFVLL SRYINALEAL GGSASLAEGL PTNTSLWDDA LDALVIGINQ
0601: VSFSGWKPNE CTAIVNELLS WKQKGLSEFE GSEDGKYIWA LRLKATLDRS RRLTEEYSEA LLSIFPEKVK VLGKALGIPE NSVRTYTEAE IRAGVIFQVS
0701: KLCTVLLKAT RAVLGSSVWD VLVPGVAHGA LIQVERIAPG SLPSSIKEPV VLVVNKADGD EEVKAAGDNI VGVILLQELP HLSHLGVRAR QEKVVFVTCE
0801: DDDTIKNTRL LEGKYVRLGA SSNNVDLSVV SNKDECAAMS SELSSGGNLF AQQFSLPLTT DKKLELSEGP SLQQRSYTSG ANIMSGVLEL SEASIESSGA
0901: KAAACGTLSV LSSVSNKVYN DQGTPAAFRV PAGAVIPFGS MEDAFKKSGS LKSYTNLLER IETAQIENGE LDSLSAELQA TVSLLSPSEE IIESLKRIFD
1001: QNVRLIVRST ANVEDLAGMS AAGLYESIPN VSLSDPSSFC AAVGQVWASL YTRRAILSRR AAGVPQRDAK MAVLVQEMLQ PDLSFVLHTV SPVDHDPKLV
1101: EAEVAPGLGE TLASGTRGTP WRLSCHKFDG KVTTLAFANF SEEMVVLNSG PTDGEVTRRT VDYSKKPLSV DATFRGQFGQ RLAAIGQYLE QKFGSAQDVE
1201: GCLVGQDIFI VQSRPQP
Best Arabidopsis Sequence Match ( AT5G26570.1 )
(BLAST)
0001: MESIGSHCCS SPFTFITRNS SSSLPRLVNI THRVNLSHQS HRLRNSNSRL TCTATSSSTI EEQRKKKDGS GTKVRLNVRL DHQVNFGDHV AMFGSAKEIG
0101: SWKKKSPLNW SENGWVCELE LDGGQVLEYK FVIVKNDGSL SWESGDNRVL KVPNSGNFSV VCHWDATRET LDLPQEVGND DDVGDGGHER DNHDVGDDRV
0201: VGSENGAQLQ KSTLGGQWQG KDASFMRSND HGNREVGRNW DTSGLEGTAL KMVEGDRNSK NWWRKLEMVR EVIVGSVERE ERLKALIYSA IYLKWINTGQ
0301: IPCFEDGGHH RPNRHAEISR LIFRELEHIC SKKDATPEEV LVARKIHPCL PSFKAEFTAA VPLTRIRDIA HRNDIPHDLK QEIKHTIQNK LHRNAGPEDL
0401: IATEAMLQRI TETPGKYSGD FVEQFKIFHN ELKDFFNAGS LTEQLDSMKI SMDDRGLSAL NLFFECKKRL DTSGESSNVL ELIKTMHSLA SLRETIIKEL
0501: NSGLRNDAPD TAIAMRQKWR LCEIGLEDYF FVLLSRFLNA LETMGGADQL AKDVGSRNVA SWNDPLDALV LGVHQVGLSG WKQEECLAIG NELLAWRERD
0601: LLEKEGEEDG KTIWAMRLKA TLDRARRLTA EYSDLLLQIF PPNVEILGKA LGIPENSVKT YTEAEIRAGI IFQISKLCTV LLKAVRNSLG SEGWDVVVPG
0701: STSGTLVQVE SIVPGSLPAT SGGPIILLVN KADGDEEVSA ANGNIAGVML LQELPHLSHL GVRARQEKIV FVTCDDDDKV ADIRRLVGKF VRLEASPSHV
0801: NLILSTEGRS RTSKSSATKK TDKNSLSKKK TDKKSLSIDD EESKPGSSSS NSLLYSSKDI PSGGIIALAD ADVPTSGSKS AACGLLASLA EASSKVHSEH
0901: GVPASFKVPT GVVIPFGSME LALKQNNSEE KFASLLEKLE TARPEGGELD DICDQIHEVM KTLQVPKETI NSISKAFLKD ARLIVRSSAN VEDLAGMSAA
1001: GLYESIPNVS PSDPLVFSDS VCQVWASLYT RRAVLSRRAA GVSQREASMA VLVQEMLSPD LSFVLHTVSP ADPDSNLVEA EIAPGLGETL ASGTRGTPWR
1101: LASGKLDGIV QTLAFANFSE ELLVSGTGPA DGKYVRLTVD YSKKRLTVDS VFRQQLGQRL GSVGFFLERN FGCAQDVEGC LVGEDVYIVQ SRPQPL
Arabidopsis Description
GWD3Phosphoglucan, water dikinase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6ZY51]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.