CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037059_P005	Maize	plastid	93.06	93.06
Os06t0474866-00	Rice	cytosol	5.04	89.16
Os06t0498400-01	Rice	mitochondrion	81.82	85.01
TraesCS7D01G235200.1	Wheat	plastid	80.46	81.35
TraesCS7A01G235200.4	Wheat	plastid	79.85	80.9
TraesCS7B01G133400.1	Wheat	plastid	79.85	80.79
HORVU7Hr1G048330.1	Barley	cytosol	80.46	79.12
CDY20604	Canola	plastid	61.06	65.28
KRH45621	Soybean	nucleus	64.81	65.25
KRG99404	Soybean	mitochondrion	64.74	65.18
VIT_01s0127g00060.t01	Wine grape	plastid	65.21	65.17
CDY68027	Canola	cytosol, plastid	9.26	65.07
Solyc05g005020.2.1	Tomato	plastid	64.67	64.85
CDY20967	Canola	plastid	60.45	64.72
PGSC0003DMT400019845	Potato	cytosol	64.26	64.48
Bra018423.1-P	Field mustard	plastid	61.13	64.37
CDY34849	Canola	plastid	59.9	63.77
AT1G10760.1	Thale cress	cytosol, plastid	60.72	63.76
CDY66790	Canola	plastid	59.56	63.41
Bra031749.1-P	Field mustard	plastid	57.86	62.41
GSMUA_Achr3P14470_001	Banana	endoplasmic reticulum, plasma membrane, plastid	67.46	61.51
KXG29990	Sorghum	plastid	15.59	18.82

Protein Annotations

MapMan:3.2.3.1.1	Gene3D:3.30.1490.20	EntrezGene:8085351	InterPro:ATP_grasp_subdomain_1	UniProt:C5Z316	ncoils:Coil
EnsemblPlants:EER89786	ProteinID:EER89786	ProteinID:EER89786.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005975	GO:GO:0005983	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009605	GO:GO:0009607
GO:GO:0009610	GO:GO:0009628	GO:GO:0009631	GO:GO:0009941	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0050521	InterPro:IPR013815	PFAM:PF01326	InterPro:PPDK_PEP-bd
PANTHER:PTHR22931	PANTHER:PTHR22931:SF1	EnsemblPlantsGene:SORBI_3010G143500	SUPFAM:SSF56059	unigene:Sbi.4668	UniParc:UPI0001A896F4
RefSeq:XP_002438419.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:38070890..38083747

Molecular Weight (calculated)

164274.0 Da

IEP (calculated)

5.921

GRAVY (calculated)

-0.385

Length

1469 amino acids

Sequence
(BLAST)

0001: MTGFSAAASA AAAAERCALA IRARPAASSP AKRQQQSASL RRSGGQRRPT TLAASRRSPV VVPRAIATSA DRASHDLVGK FTLDSNSELL VAVNPAPQGL
0101: VSVIGLEVTN TSGSLILHWG VLRPDKRDWI LPSRQPDGTT VYKNRALRTP FVKSGDNSTL RIEIDDPAVQ AIEFLIFGET QNKWFKNNGQ NFQIQLQSSR
0201: HQGNGASGAS SSATSTLVPE DLVQIQAYLR WERKGKQSYT PEQEKEEYEA ARAELIEELN RGVSLEKLRA KLTKTPEAPE SDERKSPASR MPVDKLPEDL
0301: VQVQAYIRWE KAGKPNYPPE KQLVELEEAR KELQAEVDKG ISIDQLRQKI LKGNIESKVS KQLKNKKYFS VERIQRKKRD IMQLLSKHKH TVMEEKVEVA
0401: PKQPTVLDLF TKSLHEKDGC EVLSRKLFKF GDKEILAIST KVQNKTEVHL ATNHTEPLIL HWSLAKKAGE WKAPPSNILP SGSKLLDMAC ETEFTRSELD
0501: GLCYQVVEIE LDDGGYKGMP FVLRSGETWI KNNGSDFFLD FSTRDTRNIK LKDNGDAGKG TAKALLERIA DLEEDAQRSL MHRFNIAADL ADEARDAGLL
0601: GIVGLFVWIR FMATRQLTWN KNYNVKPREI SKAQDRFTDD LENMYRTYPQ YREILRMIMA AVGRGGEGDV GQRIRDEILV IQRNNDCKGG MMEEWHQKLH
0701: NNTSPDDVVI CQALIDYIKN DFDISVYWDT LNKNGITKER LLSYDRAIHS EPNFRSEQKE GLLRDLGNYM RSLKAVHSGA DLESAIATCM GYKSEGEGFM
0801: VGVQINPVKG LPSGFPELLE FVLDHVEDKS AEPLLEGLLE ARVDLRPLLL DSPERMKDLI FLDIALDSTF RTAIERSYEE LNDAAPEKIM YFISLVLENL
0901: AFSIDDNEDI LYCLKGWNQA LEMAKQKDDQ WALYAKAFLD RIRLALASKG EQYHNMMQPS AEYLGSLLSI DKWAVNIFTE EIIRGGSAAT LSALLNRFDP
1001: VLRNVANLGS WQVISPVEVS GYVVVVDELL AVQNKSYDKP TILVAKSVKG EEEIPDGVVG VITPDMPDVL SHVSVRARNS KVLFATCFDH TTLSELEGYD
1101: QKLLSFKPTS ADITYREITE SELQQSSSPN AEVGHAVPSI SLAKKKFLGK YAISAEEFTE EMVGAKSRNI AYLKGKVPSW VGVPTSVAIP FGTFEKVLSD
1201: GLNKEVAQTI EKLKIRLAQE DFSALGEIRK AVLNLTAPMQ LVNELKERML GSGMPWPGDE GNRRWEQAWM AIKKVWASKW NERAYFSTRK VKLNHEYLSM
1301: AVLVQEVVNA DYAFVIHTTN PSSGDSSEIY AEVVKGLGET LVGAYPGRAM SFVCKKDDLD SPKLLGYPSK PIGLFIRRSI IFRSDSNGED LEGYAGAGLY
1401: DSVPMDEEDE VVLDYTTDPL IVDRGFRNSI LSSIARAGHA IEELYGSPQD VEGVVKDGKI YVVQTRPQM

Best Arabidopsis Sequence Match ( AT1G10760.2 )
(BLAST)

0001: MSNSVVHNLL NRGLIRPLNF EHQNKLNSSV YQTSTANPAL GKIGRSKLYG KGLKQAGRSL VTETGGRPLS FVPRAVLAMD PQAAEKFSLD GNIDLLVEVT
0101: STTVREVNIQ IAYTSDTLFL HWGAILDNKE NWVLPSRSPD RTQNFKNSAL RTPFVKSGGN SHLKLEIDDP AIHAIEFLIF DESRNKWYKN NGQNFHINLP
0201: TERNVKQNVS VPEDLVQIQA YLRWERKGKQ MYNPEKEKEE YEAARTELRE EMMRGASVED LRAKLLKKDN SNESPKSNGT SSSGREEKKK VSKQPERKKN
0301: YNTDKIQRKG RDLTKLIYKH VADFVEPESK SSSEPRSLTT LEIYAKAKEE QETTPVFSKK TFKLEGSAIL VFVTKLSGKT KIHVATDFKE PVTLHWALSQ
0401: KGGEWLDPPS DILPPNSLPV RGAVDTKLTI TSTDLPSPVQ TFELEIEGDS YKGMPFVLNA GERWIKNNDS DFYVDFAKEE KHVQKDYGDG KGTAKHLLDK
0501: IADLESEAQK SFMHRFNIAA DLVDEAKSAG QLGFAGILVW MRFMATRQLV WNKNYNVKPR EISKAQDRLT DLLQDVYASY PEYRELLRMI MSTVGRGGEG
0601: DVGQRIRDEI LVIQRKNDCK GGIMEEWHQK LHNNTSPDDV VICQALMDYI KSDFDLSVYW KTLNDNGITK ERLLSYDRAI HSEPNFRGEQ KDGLLRDLGH
0701: YMRTLKAVHS GADLESAIQN CMGYQDDGEG FMVGVQINPV SGLPSGYPDL LRFVLEHVEE KNVEPLLEGL LEARQELRPL LLKSHDRLKD LLFLDLALDS
0801: TVRTAIERGY EQLNDAGPEK IMYFISLVLE NLALSSDDNE DLIYCLKGWQ FALDMCKSKK DHWALYAKSV LDRSRLALAS KAERYLEILQ PSAEYLGSCL
0901: GVDQSAVSIF TEEIIRAGSA AALSSLVNRL DPVLRKTANL GSWQVISPVE VVGYVIVVDE LLTVQNKTYD RPTIIVANRV RGEEEIPDGA VAVLTPDMPD
1001: VLSHVSVRAR NGKICFATCF DSGILSDLQG KDGKLLSLQP TSADVVYKEV NDSELSSPSS DNLEDAPPSI SLVKKQFAGR YAISSEEFTS DLVGAKSRNI
1101: GYLKGKVPSW VGIPTSVALP FGVFEKVISE KANQAVNDKL LVLKKTLDEG DQGALKEIRQ TLLGLVAPPE LVEELKSTMK SSDMPWPGDE GEQRWEQAWA
1201: AIKKVWASKW NERAYFSTRK VKLDHDYLCM AVLVQEVINA DYAFVIHTTN PSSGDSSEIY AEVVKGLGET LVGAYPGRSL SFICKKNNLD SPLVLGYPSK
1301: PIGLFIRRSI IFRSDSNGED LEGYAGAGLY DSVPMDEEDQ VVLDYTTDPL ITDLSFQKKV LSDIARAGDA IEKLYGTAQD IEGVIRDGKL YVVQTRPQV

Arabidopsis Description

GWD1Alpha-glucan water dikinase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SAC6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.