CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0062g00890.t01	Wine grape	cytosol	80.2	25.63
GSMUA_Achr9P07400_001	Banana	endoplasmic reticulum, plasma membrane	72.61	25.37
KRH36357	Soybean	plastid	94.06	24.63
Solyc09g098040.2.1	Tomato	plastid	73.93	18.7
Bra020538.1-P	Field mustard	plastid	70.96	18.68
CDY19771	Canola	plastid	72.28	18.58
PGSC0003DMT400042818	Potato	cytosol	73.6	18.55
CDX87051	Canola	plastid	71.95	18.44
Bra036577.1-P	Field mustard	plastid	71.95	18.41
AT5G26570.1	Thale cress	plastid	72.28	18.31
Zm00001d023792_P005	Maize	cytosol	67.33	18.17
HORVU7Hr1G008070.7	Barley	mitochondrion	67.66	17.95
TraesCS4A01G444300.1	Wheat	plastid	67.66	17.43
Os12t0297500-01	Rice	plastid	68.65	17.25
TraesCS7D01G039500.4	Wheat	plastid	66.67	17.15
TraesCS7A01G043700.1	Wheat	plastid	66.67	17.12
KXG29990	Sorghum	plastid	67.99	16.93
CDY65142	Canola	plastid	71.95	16.58
CDY05529	Canola	plastid	70.96	16.39
KRH45621	Soybean	nucleus	24.75	5.14
KRG99404	Soybean	mitochondrion	24.75	5.14
VIT_05s0062g00900.t01	Wine grape	plastid	0.0	0.0

Protein Annotations

MapMan:3.2.3.1.2	Gene3D:3.30.1490.20	Gene3D:3.30.470.20	UniProt:A0A0R0ESA5	EMBL:ACUP02012781	InterPro:ATP_grasp_subdomain_1
EnsemblPlantsGene:GLYMA_20G249000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR013815	EnsemblPlants:KRG93123	ProteinID:KRG93123	ProteinID:KRG93123.1	PFAM:PF01326	InterPro:PPDK_PEP-bd
PANTHER:PTHR22931	PANTHER:PTHR22931:SF2	SUPFAM:SSF56059	UniParc:UPI00023DC02B	:	:

Description

hypothetical protein

Coordinates

chr20:-:47795555..47796612

Molecular Weight (calculated)

32811.0 Da

IEP (calculated)

4.818

GRAVY (calculated)

-0.110

Length

303 amino acids

Sequence
(BLAST)

001: MTVYSDQGVS ASFRVPSGAV LPFGSMELEL EKSNSTEAFR SILEKIETAK QEGGELDVLC HQLQELISSL KPSNDFIESI GRIFPSNARL IVRSSANVED
101: LAGISAAGLY ESIPNASPSN PTVFGNAVSQ VWASMYTRRA VLSRRATGVP QKEASMAVLI QEMLSPDLSF VLHTVSPTNQ DNNCVEAEIA SGLGETLASG
201: TRGTPWQISS GKFDGQVKTL AFANFSEELL VRGEGPADGE VIRLTVDYSK KPLTVDSVFR RQLGQRLCAV GFFLERKFGC PQDVEGCLVG KDIFIVQTRP
301: QPQ

Best Arabidopsis Sequence Match ( AT5G26570.1 )
(BLAST)

0001: MESIGSHCCS SPFTFITRNS SSSLPRLVNI THRVNLSHQS HRLRNSNSRL TCTATSSSTI EEQRKKKDGS GTKVRLNVRL DHQVNFGDHV AMFGSAKEIG
0101: SWKKKSPLNW SENGWVCELE LDGGQVLEYK FVIVKNDGSL SWESGDNRVL KVPNSGNFSV VCHWDATRET LDLPQEVGND DDVGDGGHER DNHDVGDDRV
0201: VGSENGAQLQ KSTLGGQWQG KDASFMRSND HGNREVGRNW DTSGLEGTAL KMVEGDRNSK NWWRKLEMVR EVIVGSVERE ERLKALIYSA IYLKWINTGQ
0301: IPCFEDGGHH RPNRHAEISR LIFRELEHIC SKKDATPEEV LVARKIHPCL PSFKAEFTAA VPLTRIRDIA HRNDIPHDLK QEIKHTIQNK LHRNAGPEDL
0401: IATEAMLQRI TETPGKYSGD FVEQFKIFHN ELKDFFNAGS LTEQLDSMKI SMDDRGLSAL NLFFECKKRL DTSGESSNVL ELIKTMHSLA SLRETIIKEL
0501: NSGLRNDAPD TAIAMRQKWR LCEIGLEDYF FVLLSRFLNA LETMGGADQL AKDVGSRNVA SWNDPLDALV LGVHQVGLSG WKQEECLAIG NELLAWRERD
0601: LLEKEGEEDG KTIWAMRLKA TLDRARRLTA EYSDLLLQIF PPNVEILGKA LGIPENSVKT YTEAEIRAGI IFQISKLCTV LLKAVRNSLG SEGWDVVVPG
0701: STSGTLVQVE SIVPGSLPAT SGGPIILLVN KADGDEEVSA ANGNIAGVML LQELPHLSHL GVRARQEKIV FVTCDDDDKV ADIRRLVGKF VRLEASPSHV
0801: NLILSTEGRS RTSKSSATKK TDKNSLSKKK TDKKSLSIDD EESKPGSSSS NSLLYSSKDI PSGGIIALAD ADVPTSGSKS AACGLLASLA EASSKVHSEH
0901: GVPASFKVPT GVVIPFGSME LALKQNNSEE KFASLLEKLE TARPEGGELD DICDQIHEVM KTLQVPKETI NSISKAFLKD ARLIVRSSAN VEDLAGMSAA
1001: GLYESIPNVS PSDPLVFSDS VCQVWASLYT RRAVLSRRAA GVSQREASMA VLVQEMLSPD LSFVLHTVSP ADPDSNLVEA EIAPGLGETL ASGTRGTPWR
1101: LASGKLDGIV QTLAFANFSE ELLVSGTGPA DGKYVRLTVD YSKKRLTVDS VFRQQLGQRL GSVGFFLERN FGCAQDVEGC LVGEDVYIVQ SRPQPL

Arabidopsis Description

GWD3Phosphoglucan, water dikinase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6ZY51]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.