CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013803.1-P	Field mustard	cytosol	82.93	96.48
CDY56576	Canola	plastid	85.82	87.71
AT4G24450.3	Thale cress	cytosol	72.51	84.43
GSMUA_Achr9P15680_001	Banana	cytosol	44.35	50.77
CDY20604	Canola	plastid	39.72	43.01
CDY20967	Canola	plastid	39.52	42.86
CDY66790	Canola	plastid	39.72	42.83
CDY34849	Canola	plastid	39.65	42.75
CDY68027	Canola	cytosol, plastid	5.98	42.58
CDY28368	Canola	nucleus	9.27	36.32
CDY16889	Canola	cytosol, mitochondrion	9.27	35.94
CDY16527	Canola	nucleus	9.07	33.5
CDX99058	Canola	nucleus	9.41	33.18
CDY56650	Canola	nucleus	9.21	32.24
CDY08936	Canola	nucleus	1.28	17.92
CDY24839	Canola	nucleus	1.28	17.92
CDY19771	Canola	plastid	13.84	17.47
CDX87051	Canola	plastid	13.64	17.17
CDY05529	Canola	plastid	13.51	15.32
CDY65142	Canola	plastid	13.24	14.98

Protein Annotations

Gene3D:1.10.287.190	MapMan:15.3.5.1.2	Gene3D:2.30.18.10	MapMan:3.2.3.1.1	Gene3D:3.30.1490.20	Gene3D:3.30.470.20
GO:A0A078J880	UniProt:A0A078J880	InterPro:ATP_grasp_subdomain_1	EnsemblPlants:CDY61008	ProteinID:CDY61008	ProteinID:CDY61008.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005672
GO:GO:0006139	GO:GO:0006367	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00030393001	InterPro:IPR009083	InterPro:IPR009088
InterPro:IPR013815	PFAM:PD009224	PFAM:PF01326	PFAM:PF02268	PFAM:PF02751	InterPro:PPDK_PEP-bd
PANTHER:PTHR22931	PANTHER:PTHR22931:SF1	SUPFAM:SSF47396	SUPFAM:SSF50784	SUPFAM:SSF56059	InterPro:TFIIA_a-hlx
InterPro:TFIIA_b-brl	InterPro:TFIIA_gsu_C	InterPro:TFIIA_gsu_N	UniParc:UPI0004EDB494	SEG:seg	:

Description

BnaA01g35130DBnaA01g35130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J880]

Coordinates

chrLK033944:+:15798..25497

Molecular Weight (calculated)

168559.0 Da

IEP (calculated)

8.664

GRAVY (calculated)

-0.260

Length

1488 amino acids

Sequence
(BLAST)

0001: MEFFFLQSRG VLLKHRLQKL GYKSSNSFSS LKRQIPSQST NGSYCIRRDS LSFRRRRSIV EEVEIMATFE LYRRSTIGMC LTETLDEMVQ SGTLSPELAI
0101: QVLVQFDKSM TEALESQVKT KVSIKGHLHT YRFCDNVWTF ILQDAMFKND DRQENVSRVK IVACDSKLLT HCHMSFLPLQ MCFHQSRREY DSSAMATSKS
0201: HSFQLIEGME LQITVTGLPN GSSVRTEFHL KNCNRTWILH WGCIYQGNNN WFVPSEHSTK QGALQTPFVK SGNDYVVILE LRDPEVRAVE FVLKDGNRNR
0301: WLKQHTGNFR VEIPWNELHA HHRIPKNLIE RRAYTIWDRK GRPQNTAREQ QMDYENAIRE LQADLARGIS IDDLQANSSI PVEKAVISEP KQTMNLHQPS
0401: HRRKHDVQKW LQKYAEPITK NASVNSSALA ELLKKSVGQE NVVSQKSFHI RNYEIAVLQK NVNGDCRLYV ATNMAGPTVL HWGVAKSSAG EWLTPPPDVL
0501: PEKSKIVHGA CQTYFTDMSS REHSYQLIVI NFKRSGFVGI QFVIWSGSHW VNNNGANFAV NLISLNSTGG KLGVDGKYIL KWLLDEIAER EKEAERSLMH
0601: RFNIATELTE RCKDEGEGGC IGIMVWMKFM ATRHLTWNKN YNVKPREISE ALERFTNLME KIYLQQPYKR EIVRLTMALV GRGGQGDVGQ RIRDEILVIQ
0701: RNNHCKSGMM EEWHQKLHNN SSADDVIICE ALLNYVRSDF KIDAYWKTLK ANGLTKERLA SYDRPILSEP RFKSDAKEGL IRDLTMYLKT LKAVHSGADL
0801: ESAIDTFLSP AKGHNVFALN GLSPKLQAHF LHSLTIFSIH ISVKRLVREE NTAPLIEKLV DARIELHPAL RAPRARAKDL LFLDIALESC FKTTIEKRLI
0901: SLNFNSPPEV VFVICVVLEN LCLSTFNNEE DCYRVSETYK AHDVEWALQT KAVLDRLQLV LADRCQHYLR LIQPSANYLG QMLRVDKHGI DVFTEEVVRA
1001: GPGAVLSTLV NRFDPCLRKI ANLGCWQVIS SADAYGFLVC VNELITVQSK VYSKPTVIIA SKVTGEEEIP DGVVAVLTPS LIDVLSHVSI RARNSKACTI
1101: FCLMQICFAT CFDQNVLKNL KSKEGREISI HINSTGLVIS DGNNSDGHVR HIYISSVSHG VVSKRKKFCS NYVISSKEFT SEMVGSKSCN IKFLRERVPS
1201: WIKIPTSVAL PFGTFECALS DDSNKDVAHK ISALKVSLNR GDMTKLKAIQ EAVLQMNAPI ALKNELIHKL RSERMSYHGD ESSWNRSWMA IKKVWASKWN
1301: ERAYVSCKKT RVDHDAVCMA VLVQEVICGD YAFVIHTNNP VTGDPSEIYT EIVKGLGETL VGGYPGRAMS FITKKTNLKS PTVISYPSKR IGLYSKPSVI
1401: FRSDSNNEDL EGYAGAGLYD SVIMDEAEEV MVDYSREQLI VDKAFQVRLF SAIAEAGNVI ETLYGCPQDI EGVVKGGIIY VVQARPQL

Best Arabidopsis Sequence Match ( AT4G24450.3 )
(BLAST)

0001: MATSKSQQFQ LIEGMELQIT VTGLPNGSSV RAEFHLKNCT RAWILHWGCI YQGNNHWYIP SEHSSKQGAL QTTFVKSGDA YVVILELRDP RVRAIEFVLK
0101: DGSHNRWLRQ HNGNFRVEIP WNDLHAHHRI PKTLIERRAH KIWDRKGRPQ SSAREQQIDY DNAVRELHAE LARGISLDEL QANSTVPVEK EETSEPHHTM
0201: IQSYRRKHDV QKWLQKYTEP INRSGSVKSS ALAELSKRSV GQENLVSQKS FHVRNYEITV LQRDVKGDCR LWIATNMAGP TVLHWGVAKS SAGEWLIPPP
0301: DVLPEKSKFV HGACQTQFTD MSSREHSYQF IDINLKRGGF VGIQFVIWSG GYWVNNNGAN FVVNLKSADS TSGKLDVDEK YVLKWLLDEI SEREKEAERS
0401: LMHRFNIATE LTERCKDEGE GGCIGIMVWM RFMATRHLTW NKNYNVKPRE ISEALERFTN LMEKIYLQQP NKREIVRLTM ALVGRGGQGD VGQRIRDEIL
0501: VIQRNNHCKS GMMEEWHQKL HNNSSADDVI ICEALLNYVR SDFRIDAYWQ TLQTNGLTKE RLASYDRPIV SEPRFRSDSK EGLIRDLTMY LKTLKAVHSG
0601: ADLESAIDTF LSPSKGHHVF AVNGLSPKLQ DLLNLVKRLV REENTEPLIE KLVDARIQLH PALRAPRTRA KDLLFLDIAL ESCFKTTIEK RLISLNFNNP
0701: PEIIYVICVV LENLCLSIVN NEEIIFCTKD WYRVSEAYRP HDVQWALQTK AVLDRLQLVL ADRCQHYFTI IQPTAKYLGQ LLRVDKHGID VFTEEVIRAG
0801: PGAVLSTLVN RFDPSLRKIA NLGCWQVISS ADAYGFVVCV NELIVVQNKF YSKPTVIIAS KVTGEEEIPA GVVAVLTPSM IDVLSHVSIR ARNSKICFAT
0901: CFDQNVLSNL KSKEGRAISI HTKSTGLVIS DGNNSDVSVR HIFISSVPRG VISKGKKFCG HYVISSKEFT DERVGSKSYN IKFLRERVPS WIKIPTSAAL
1001: PFGTFENILS DDSNKDVARR ISVLKDSLNR GDLTKLKSIQ EAILQMSAPM ALRNELITKL RSERMPYLGD ESGWNRSWVA IKKVWASKWN ERAYVSCKKN
1101: KLDHDAVCMA VLIQEVICGD YAFVIHTNNP VSGDSSEIYT EIVKGLGETL VGAYPGRAMS FITKKTNLKS PTVISYPSKR IGLYSKPSII FRSDSNNEDL
1201: EGNAGAGLYD SVIMDEAEEV VVDYSREPLI MDKSFRVRLF SAIAEAGNVI ESIYGCPQDI EGVVKGGHIY IVQARPQV

Arabidopsis Description

GWD2Alpha-glucan water dikinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9STV0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.