CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035020.1-P	Field mustard	cytosol	95.28	82.45
CDX88428	Canola	cytosol	91.51	80.5
AT1G78220.1	Thale cress	cytosol	65.09	56.33
CDY69181	Canola	cytosol	53.77	45.06
CDY38227	Canola	cytosol	53.77	45.06
CDY42826	Canola	cytosol	50.94	39.85
CDY61201	Canola	cytosol	50.47	39.34
CDX91996	Canola	cytosol	48.11	39.08
CDY28698	Canola	cytosol	48.11	39.08
CDY51543	Canola	cytosol	48.11	39.08
CDX74252	Canola	cytosol	48.11	39.08
CDY46646	Canola	cytosol	47.64	38.85
CDY41483	Canola	cytosol	47.17	38.61
CDX91676	Canola	cytosol	47.17	38.61
CDX88436	Canola	cytosol	47.17	38.46
CDY00447	Canola	cytosol	47.17	38.46
CDX67405	Canola	cytosol	46.7	38.37
CDY14562	Canola	cytosol	44.81	38.31
CDY08794	Canola	cytosol	44.81	38.31
CDY16161	Canola	cytosol	48.58	38.29
CDX85023	Canola	cytosol	48.58	38.15
CDY71290	Canola	cytosol	46.23	38.13
CDY01659	Canola	cytosol	46.23	38.13
CDX74521	Canola	cytosol	46.23	38.13
CDY12024	Canola	cytosol	46.7	37.93
CDY54716	Canola	cytosol	44.34	37.75
CDX73313	Canola	cytosol	47.17	37.74
CDX68022	Canola	cytosol	46.23	37.69
CDY14618	Canola	cytosol	46.23	37.69
CDX79255	Canola	cytosol	46.23	37.69
CDX91673	Canola	cytosol	47.64	37.55
CDX85759	Canola	cytosol	43.87	37.5
CDY40098	Canola	cytosol	43.87	37.5
CDX81287	Canola	cytosol	43.87	37.35
CDY28408	Canola	cytosol	46.23	37.26
CDY48771	Canola	cytosol	31.6	36.81
CDY40251	Canola	cytosol	42.45	36.73
CDX97016	Canola	cytosol	39.15	36.4
CDX81179	Canola	cytosol	42.92	36.4
CDX78381	Canola	cytosol	42.92	36.4
CDY20560	Canola	cytosol	42.45	33.71
CDY52206	Canola	mitochondrion	31.13	33.5
CDY56386	Canola	mitochondrion	31.13	33.5
CDX87455	Canola	cytosol	47.17	33.44
CDY24128	Canola	cytosol	48.11	31.1
CDY61631	Canola	cytosol	48.11	31.1
CDY03135	Canola	cytosol	47.64	25.63
CDX97014	Canola	cytosol, plastid	9.91	19.09

Protein Annotations

EnsemblPlants:CDX87464	EnsemblPlantsGene:GSBRNA2T00146447001	Gene3D:1.20.190.20	GO:A0A078DGD7	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0019904	InterPro:14-3-3	InterPro:14-3-3_dom_sf	InterPro:14-3-3_domain	InterPro:IPR036815
PANTHER:PTHR18860	PANTHER:PTHR18860:SF32	PFAM:PF00244	PIRSF:PIRSF000868	PRINTS:PR00305	ProteinID:CDX87464
ProteinID:CDX87464.1	SMART:SM00101	SUPFAM:SSF48445	UniParc:UPI0004EEE351	MapMan:35.1	:

Description

BnaA07g34090D

Coordinates

chrLK031850:+:740822..742193

Molecular Weight (calculated)

24188.0 Da

IEP (calculated)

7.245

GRAVY (calculated)

-0.345

Length

212 amino acids

Sequence
(BLAST)

001: MENERGKLIY LATLAYLAKR YDDMTKSMRK VCEYEIELTD VERELLAIGY KNVMTTKRAS LRALSSIGEK EDSKGNKQNV KLINKKLEIV KHEFSVFSTV
101: YYYAMKANYF RYMAEFGSDA ERQGAADNSL EAYKIAMEMA EGGLSPTNLV RLGLALNFSI FNYVILKSTE RFATACKLAK KAYDEAISEL DGADKQSYED
201: TTFIVDILRD RV

Best Arabidopsis Sequence Match ( AT1G22300.1 )
(BLAST)

001: MENEREKQVY LAKLSEQTER YDEMVEAMKK VAQLDVELTV EERNLVSVGY KNVIGARRAS WRILSSIEQK EESKGNDENV KRLKNYRKRV EDELAKVCND
101: ILSVIDKHLI PSSNAVESTV FFYKMKGDYY RYLAEFSSGA ERKEAADQSL EAYKAAVAAA ENGLAPTHPV RLGLALNFSV FYYEILNSPE SACQLAKQAF
201: DDAIAELDSL NEESYKDSTL IMQLLRDNLT LWTSDLNEEG DERTKGADEP QDEN

Arabidopsis Description

GRF10GRF10 [Source:UniProtKB/TrEMBL;Acc:A0A178W0Z4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.