Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31481 | Canola | nucleus | 45.45 | 89.86 |
| Bra016460.1-P | Field mustard | nucleus | 80.89 | 84.63 |
| CDX96631 | Canola | nucleus | 80.19 | 83.9 |
| CDY33634 | Canola | nucleus | 79.72 | 83.82 |
| Bra025831.1-P | Field mustard | nucleus | 75.76 | 79.27 |
| CDY29520 | Canola | nucleus | 75.52 | 79.02 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 44.06 | 71.32 |
| AT1G76310.3 | Thale cress | nucleus | 75.76 | 70.81 |
| PGSC0003DMT400075380 | Potato | nucleus | 38.46 | 69.62 |
| Solyc04g082430.2.1 | Tomato | nucleus | 57.58 | 62.85 |
| VIT_18s0001g14170.t01 | Wine grape | nucleus | 64.34 | 62.59 |
| PGSC0003DMT400025854 | Potato | nucleus | 62.7 | 61.0 |
| Solyc12g094600.1.1 | Tomato | nucleus | 59.44 | 60.0 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 30.07 | 59.45 |
| KRH60628 | Soybean | nucleus | 54.55 | 57.78 |
| KRH51329 | Soybean | nucleus, plastid | 55.01 | 56.87 |
| GSMUA_Achr11P... | Banana | nucleus | 53.38 | 56.13 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 54.78 | 55.42 |
| Os06t0726800-01 | Rice | nucleus | 53.85 | 55.13 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 53.85 | 55.0 |
| KXG20945 | Sorghum | nucleus | 54.31 | 54.95 |
| Zm00001d036360_P002 | Maize | nucleus | 54.31 | 54.95 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 52.68 | 53.94 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 52.21 | 53.46 |
| AT4G35620.1 | Thale cress | nucleus | 53.38 | 53.38 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 51.98 | 53.22 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 51.75 | 52.86 |
| AT2G17620.1 | Thale cress | nucleus | 51.98 | 51.98 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 48.72 | 51.6 |
| Os04t0563700-01 | Rice | mitochondrion | 49.88 | 50.95 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 48.48 | 50.86 |
| Zm00001d026129_P001 | Maize | nucleus | 50.12 | 50.47 |
| EES12664 | Sorghum | nucleus | 50.82 | 50.46 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 48.72 | 49.64 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 31.47 | 48.56 |
| Zm00001d002662_P010 | Maize | nucleus | 50.82 | 47.91 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 48.25 | 43.95 |
| AT3G11520.1 | Thale cress | nucleus | 37.06 | 38.41 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 54.78 | 35.18 |
| AT2G26760.1 | Thale cress | nucleus | 31.24 | 34.63 |
| AT5G06150.1 | Thale cress | nucleus | 35.43 | 34.16 |
| AT4G37490.1 | Thale cress | nucleus | 32.63 | 32.71 |
| AT1G47220.1 | Thale cress | nucleus | 22.84 | 29.97 |
| AT1G47210.2 | Thale cress | nucleus | 25.64 | 29.57 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 24.01 | 27.84 |
| AT1G77390.1 | Thale cress | plastid | 28.21 | 27.38 |
| AT5G43080.1 | Thale cress | nucleus | 22.61 | 27.32 |
| AT5G11300.1 | Thale cress | plastid | 27.27 | 26.83 |
| AT1G44110.1 | Thale cress | plastid | 27.74 | 25.87 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 26.34 | 25.11 |
| AT5G25380.4 | Thale cress | plastid | 25.87 | 25.06 |
| AT1G80370.1 | Thale cress | plastid | 25.87 | 24.08 |
| AT1G16330.1 | Thale cress | nucleus | 34.73 | 22.99 |
| AT1G34460.5 | Thale cress | cytosol | 26.34 | 22.69 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:838650 | ProteinID:AAF79603.1 | ProteinID:AAF80638.1 | ProteinID:AEE29993.1 |
| ArrayExpress:AT1G20610 | EnsemblPlantsGene:AT1G20610 | RefSeq:AT1G20610 | TAIR:AT1G20610 | RefSeq:AT1G20610-TAIR-G | EnsemblPlants:AT1G20610.1 |
| TAIR:AT1G20610.1 | Unigene:At.49897 | EMBL:BT029740 | Symbol:CYCB2;3 | ncoils:Coil | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051301 | RefSeq:NP_173485.1 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| PO:PO:0000293 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF350 | UniProt:Q9LDM4 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0000162E3F | SEG:seg | : | : |
Description
CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
Coordinates
chr1:-:7134659..7137828
Molecular Weight (calculated)
48866.8 Da
IEP (calculated)
5.381
GRAVY (calculated)
-0.348
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.