Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY62475 | Canola | nucleus | 66.91 | 78.92 |
| Bra002046.1-P | Field mustard | nucleus | 74.88 | 78.88 |
| CDY69551 | Canola | nucleus | 67.63 | 78.87 |
| AT5G06150.1 | Thale cress | nucleus | 68.84 | 64.04 |
| KRH66720 | Soybean | endoplasmic reticulum, vacuole | 27.05 | 56.28 |
| TraesCSU01G217300.1 | Wheat | cytosol | 29.23 | 56.02 |
| VIT_08s0040g00930.t01 | Wine grape | nucleus | 58.45 | 53.42 |
| KRH66715 | Soybean | nucleus | 50.24 | 53.06 |
| AT4G37490.1 | Thale cress | nucleus | 54.35 | 52.57 |
| KRG95055 | Soybean | nucleus | 57.73 | 52.53 |
| Zm00001d019469_P001 | Maize | extracellular | 18.12 | 52.45 |
| KRH66713 | Soybean | nucleus | 57.49 | 52.42 |
| AT2G26760.1 | Thale cress | nucleus | 48.07 | 51.42 |
| Solyc10g080950.1.1 | Tomato | nucleus | 55.8 | 50.0 |
| VIT_13s0067g01420.t01 | Wine grape | nucleus | 55.56 | 49.78 |
| Solyc10g078330.1.1 | Tomato | nucleus | 50.72 | 49.65 |
| GSMUA_Achr7P21380_001 | Banana | nucleus | 54.59 | 49.45 |
| PGSC0003DMT400018480 | Potato | nucleus | 50.72 | 49.41 |
| PGSC0003DMT400072211 | Potato | nucleus | 55.31 | 49.35 |
| GSMUA_Achr10P... | Banana | nucleus | 53.38 | 48.79 |
| GSMUA_Achr4P10090_001 | Banana | nucleus | 49.76 | 48.47 |
| HORVU0Hr1G001680.1 | Barley | nucleus | 37.2 | 48.12 |
| KRH66718 | Soybean | plastid | 43.24 | 47.99 |
| GSMUA_Achr8P23970_001 | Banana | nucleus | 50.24 | 47.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.06 | 47.32 |
| GSMUA_Achr3P24980_001 | Banana | nucleus | 45.65 | 47.01 |
| KXG24389 | Sorghum | nucleus | 28.5 | 46.83 |
| TraesCS3D01G326600.1 | Wheat | nucleus | 51.21 | 46.59 |
| HORVU3Hr1G078880.2 | Barley | nucleus | 50.72 | 46.36 |
| TraesCS3A01G333000.2 | Wheat | nucleus | 51.45 | 46.3 |
| KRG95056 | Soybean | cytosol | 43.0 | 45.99 |
| TraesCS3B01G363200.3 | Wheat | nucleus | 51.21 | 45.99 |
| EES03772 | Sorghum | nucleus, plastid | 49.52 | 45.66 |
| TraesCS1D01G309300.1 | Wheat | nucleus, plastid | 48.07 | 45.64 |
| HORVU1Hr1G068080.1 | Barley | plastid | 37.68 | 45.61 |
| Zm00001d012560_P002 | Maize | nucleus, plastid | 49.28 | 45.43 |
| TraesCS1B01G320900.1 | Wheat | nucleus, plastid | 47.83 | 45.41 |
| TraesCS1A01G309800.1 | Wheat | nucleus | 47.34 | 44.95 |
| HORVU1Hr1G068010.7 | Barley | mitochondrion, nucleus | 45.41 | 44.76 |
| TraesCS1D01G309400.1 | Wheat | nucleus | 47.1 | 44.62 |
| TraesCS1B01G321000.1 | Wheat | nucleus | 46.62 | 44.27 |
| HORVU1Hr1G068160.2 | Barley | nucleus, plastid | 47.34 | 44.24 |
| HORVU0Hr1G026010.1 | Barley | nucleus, plastid | 47.34 | 44.24 |
| HORVU0Hr1G001690.16 | Barley | nucleus, peroxisome | 45.65 | 43.15 |
| TraesCS3D01G195200.1 | Wheat | plastid | 43.0 | 43.1 |
| Os01t0281200-01 | Rice | nucleus | 43.72 | 42.79 |
| TraesCS3A01G192100.1 | Wheat | nucleus, plastid | 42.51 | 42.51 |
| TraesCS7A01G229300.1 | Wheat | endoplasmic reticulum | 33.33 | 41.95 |
| Zm00001d043164_P002 | Maize | nucleus | 48.79 | 41.74 |
| Zm00001d010656_P001 | Maize | nucleus | 44.69 | 41.48 |
| EES18429 | Sorghum | mitochondrion | 44.44 | 40.0 |
| AT1G34460.5 | Thale cress | cytosol | 47.34 | 39.36 |
| EES02793 | Sorghum | nucleus | 43.48 | 38.88 |
| Os05t0493500-00 | Rice | nucleus | 44.69 | 37.99 |
| AT4G35620.1 | Thale cress | nucleus | 38.89 | 37.53 |
| Zm00001d008221_P001 | Maize | nucleus | 43.0 | 37.16 |
| AT2G17620.1 | Thale cress | nucleus | 38.41 | 37.06 |
| AT1G20610.1 | Thale cress | nucleus | 38.41 | 37.06 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 23.43 | 36.6 |
| Os02t0627800-00 | Rice | cytosol, mitochondrion, peroxisome | 34.06 | 35.61 |
| HORVU3Hr1G040990.2 | Barley | nucleus, plastid | 42.03 | 35.37 |
| AT1G76310.3 | Thale cress | nucleus | 37.44 | 33.77 |
| AT1G47220.1 | Thale cress | nucleus | 26.09 | 33.03 |
| AT1G47210.2 | Thale cress | nucleus | 29.23 | 32.53 |
| AT5G43080.1 | Thale cress | nucleus | 27.54 | 32.11 |
| Zm00001d020033_P001 | Maize | nucleus | 41.3 | 31.43 |
| Zm00001d020996_P001 | Maize | nucleus | 40.82 | 31.07 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 25.85 | 28.92 |
| AT5G11300.1 | Thale cress | plastid | 28.5 | 27.06 |
| AT1G77390.1 | Thale cress | plastid | 28.26 | 26.47 |
| AT1G44110.1 | Thale cress | plastid | 29.23 | 26.3 |
| AT1G80370.1 | Thale cress | plastid | 28.74 | 25.81 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 27.54 | 25.33 |
| AT5G25380.4 | Thale cress | plastid | 27.05 | 25.28 |
| AT1G16330.1 | Thale cress | nucleus | 36.23 | 23.15 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:820325 | ProteinID:AAG51435.1 | ProteinID:AEE75057.1 | EMBL:AK227951 |
| ArrayExpress:AT3G11520 | EnsemblPlantsGene:AT3G11520 | RefSeq:AT3G11520 | TAIR:AT3G11520 | RefSeq:AT3G11520-TAIR-G | EnsemblPlants:AT3G11520.1 |
| TAIR:AT3G11520.1 | Unigene:At.39734 | EMBL:BT006437 | Symbol:CYCB1;3 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0051301 | EMBL:L27224 | RefSeq:NP_187759.2 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF267 | UniProt:Q39069 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0000163382 | SEG:seg | : | : |
Description
CYCB1-3Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069]
Coordinates
chr3:-:3625286..3627273
Molecular Weight (calculated)
46269.2 Da
IEP (calculated)
9.363
GRAVY (calculated)
-0.204
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGPVVHPQ PVRGDPIDLK NAAAKNRRAL GDIGNVDSLI GVEGGKLNRP ITRNFRAQLL ENAQVAAAAN KKAPILDGVT KKQEVVRAVQ KKARGDKREP
101: SKPIEVIVIS PDTNEVAKAK ENKKKVTYSS VLDARSKAAS KTLDIDYVDK ENDLAAVEYV EDMYIFYKEV VNESKPQMYM HTQPEIDEKM RSILIDWLVE
201: VHVKFDLSPE TLYLTVNIID RFLSLKTVPR RELQLVGVSA LLIASKYEEI WPPQVNDLVY VTDNSYNSRQ ILVMEKTILG NLEWYLTVPT QYVFLVRFIK
301: ASGSDQKLEN LVHFLAELGL MHHDSLMFCP SMLAASAVYT ARCCLNKTPT WTDTLKFHTG YSESQLMDCS KLLAFIHSKA GESKLRGVLK KYSKLGRGAV
401: ALISPAKSLM SSAP
101: SKPIEVIVIS PDTNEVAKAK ENKKKVTYSS VLDARSKAAS KTLDIDYVDK ENDLAAVEYV EDMYIFYKEV VNESKPQMYM HTQPEIDEKM RSILIDWLVE
201: VHVKFDLSPE TLYLTVNIID RFLSLKTVPR RELQLVGVSA LLIASKYEEI WPPQVNDLVY VTDNSYNSRQ ILVMEKTILG NLEWYLTVPT QYVFLVRFIK
301: ASGSDQKLEN LVHFLAELGL MHHDSLMFCP SMLAASAVYT ARCCLNKTPT WTDTLKFHTG YSESQLMDCS KLLAFIHSKA GESKLRGVLK KYSKLGRGAV
401: ALISPAKSLM SSAP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.