Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07838 | Canola | nucleus | 83.45 | 85.65 |
| CDY26816 | Canola | nucleus | 80.65 | 85.01 |
| Bra024504.1-P | Field mustard | nucleus | 82.52 | 84.49 |
| CDY29184 | Canola | nucleus | 82.52 | 84.49 |
| CDY30357 | Canola | nucleus | 80.42 | 84.35 |
| Bra037265.1-P | Field mustard | nucleus | 79.95 | 83.86 |
| AT4G35620.1 | Thale cress | nucleus | 75.29 | 75.29 |
| KRH76553 | Soybean | nucleus | 59.91 | 59.49 |
| KRH28901 | Soybean | nucleus | 59.67 | 59.12 |
| GSMUA_Achr5P19270_001 | Banana | cytosol | 28.44 | 56.22 |
| Solyc02g061650.1.1 | Tomato | nucleus | 45.92 | 56.13 |
| PGSC0003DMT400093973 | Potato | nucleus | 42.89 | 55.76 |
| GSMUA_Achr11P... | Banana | nucleus | 49.65 | 52.21 |
| AT1G20610.1 | Thale cress | nucleus | 51.98 | 51.98 |
| GSMUA_Achr8P13320_001 | Banana | nucleus | 50.58 | 51.67 |
| Os06t0726800-01 | Rice | nucleus | 49.65 | 50.84 |
| TraesCS2B01G422800.1 | Wheat | nucleus | 48.02 | 50.37 |
| HORVU0Hr1G022770.1 | Barley | nucleus, plastid | 32.4 | 50.0 |
| TraesCS2A01G404800.1 | Wheat | nucleus | 47.09 | 49.88 |
| AT1G20590.1 | Thale cress | cytosol, golgi, nucleus, plastid | 30.77 | 49.81 |
| GSMUA_Achr5P19110_001 | Banana | nucleus | 49.18 | 49.76 |
| KXG20945 | Sorghum | nucleus | 49.18 | 49.76 |
| Zm00001d036360_P002 | Maize | nucleus | 48.95 | 49.53 |
| Os04t0563700-01 | Rice | mitochondrion | 48.25 | 49.29 |
| HORVU7Hr1G121820.6 | Barley | nucleus | 48.25 | 49.29 |
| TraesCS2D01G401700.1 | Wheat | nucleus, plastid | 47.79 | 48.69 |
| TraesCS7B01G472800.1 | Wheat | nucleus | 47.55 | 48.69 |
| TraesCS7D01G536000.1 | Wheat | nucleus | 47.55 | 48.69 |
| Zm00001d026129_P001 | Maize | nucleus | 48.25 | 48.59 |
| TraesCS7A01G549500.1 | Wheat | nucleus | 47.32 | 48.45 |
| EES12664 | Sorghum | nucleus | 48.72 | 48.38 |
| AT1G76310.3 | Thale cress | nucleus | 50.58 | 47.28 |
| Zm00001d002662_P010 | Maize | nucleus | 47.09 | 44.4 |
| HORVU2Hr1G096070.2 | Barley | nucleus | 46.62 | 42.46 |
| AT3G11520.1 | Thale cress | nucleus | 37.06 | 38.41 |
| AT2G26760.1 | Thale cress | nucleus | 33.33 | 36.95 |
| AT5G06150.1 | Thale cress | nucleus | 36.36 | 35.06 |
| AT4G37490.1 | Thale cress | nucleus | 34.73 | 34.81 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, vacuole | 51.98 | 33.38 |
| AT1G47220.1 | Thale cress | nucleus | 24.01 | 31.5 |
| AT1G47210.2 | Thale cress | nucleus | 26.11 | 30.11 |
| AT1G77390.1 | Thale cress | plastid | 30.07 | 29.19 |
| AT1G47230.2 | Thale cress | nucleus, plastid | 24.94 | 28.92 |
| AT5G43080.1 | Thale cress | nucleus | 23.31 | 28.17 |
| AT5G11300.1 | Thale cress | plastid | 28.21 | 27.75 |
| AT1G44110.1 | Thale cress | plastid | 29.14 | 27.17 |
| AT1G15570.1 | Thale cress | nucleus, plastid | 28.44 | 27.11 |
| AT5G25380.4 | Thale cress | plastid | 27.51 | 26.64 |
| AT1G80370.1 | Thale cress | plastid | 28.44 | 26.46 |
| AT1G16330.1 | Thale cress | nucleus | 32.87 | 21.76 |
| AT1G34460.5 | Thale cress | cytosol | 24.71 | 21.29 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.2 | EntrezGene:816269 | ProteinID:AAD32949.1 | ProteinID:AEC06658.1 | ArrayExpress:AT2G17620 |
| EnsemblPlantsGene:AT2G17620 | RefSeq:AT2G17620 | TAIR:AT2G17620 | RefSeq:AT2G17620-TAIR-G | EnsemblPlants:AT2G17620.1 | TAIR:AT2G17620.1 |
| Unigene:At.25 | Symbol:CYCB2;1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051301 | RefSeq:NP_179353.1 |
| PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF336 |
| UniProt:Q39068 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00000A0B6A | EMBL:Z31400 |
| SEG:seg | : | : | : | : | : |
Description
CYCB2-1Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068]
Coordinates
chr2:+:7664055..7666522
Molecular Weight (calculated)
49245.4 Da
IEP (calculated)
5.184
GRAVY (calculated)
-0.263
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNSCENKIF VKPTSTTILQ DETRSRKFGQ EMKREKRRVL RVINQNLAGA RVYPCVVNKR GSLLSNKQEE EEGCQKKKFD SLRPSVTRSG VEEETNKKLK
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS
101: PSVPSANDFG DCIFIDEEEA TLDLPMPMSL EKPYIEADPM EEVEMEDVTV EEPIVDIDVL DSKNSLAAVE YVQDLYAFYR TMERFSCVPV DYMMQQIDLN
201: EKMRAILIDW LIEVHDKFDL INETLFLTVN LIDRFLSKQN VMRKKLQLVG LVALLLACKY EEVSVPVVED LVLISDKAYT RNDVLEMEKT MLSTLQFNIS
301: LPTQYPFLKR FLKAAQADKK CEVLASFLIE LALVEYEMLR FPPSLLAATS VYTAQCTLDG SRKWNSTCEF HCHYSEDQLM ECSRKLVSLH QRAATGNLTG
401: VYRKYSTSKF GYIAKCEAAH FLVSESHHS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.