Factsheet for Os06t0726800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 12753582

gfp PMID: 12753582

J Lee, A Das, M Yamaguchi, J Hashimoto, N Tsutsumi, H Uchimiya, M Umeda

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0803200-01
Os02t0282900-01
Os02t0521300-01
Os02t0611400-01
Os03t0132200-01
Os03t0146300-01
Os03t0710800-01
Os03t0740700-01
Os04t0382100-01
Os04t0398000-02
Os04t0443300-00
Os04t0485000-01
Os04t0661900-01
Os05t0494200-02
Os06t0725300-01
Os07t0475400-01
Os08t0512600-01
Os09t0553100-00
Os10t0539500-01
Os10t0542400-01
Os11t0160500-01
Os11t0546000-01
Os11t0546900-01
Os12t0162500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20590.1	Os02t0282900-01	AT4G19210.1	20706207
AT1G20590.1	Os11t0546000-01	AT4G19210.1	20706207
AT1G20610.1	Os02t0611400-01	AT1G19520.1	20706207
AT1G20610.1	Os11t0160500-01	AT1G43700.1	20706207
AT1G20610.1	Os12t0162500-01	AT1G43700.1	20706207
AT1G20610.1	Os03t0740700-01	AT1G56290.1	20706207
AT1G20610.1	Os04t0443300-00	AT1G71380.1	20706207
AT1G20610.1	Os03t0146300-01	AT2G27960.1	20706207
AT1G20610.1	Os04t0661900-01	AT3G11270.1	20706207
AT1G20610.1	Os02t0521300-01	AT5G07300.1	20706207
AT1G20610.1	Os04t0398000-02	AT5G13330.1	20706207
AT1G20610.1	Os04t0382100-01	AT5G14170.1	20706207
AT2G17620.1	Os08t0512600-01	AT1G76540.1	12857813
AT4G35620.1	Os10t0539500-01	AT1G07660.1	20706207
AT4G35620.1	Os04t0443300-00	AT1G71380.1	20706207
AT4G35620.1	Os03t0132200-01	AT3G45970.1	20706207
AT4G35620.1	Os06t0725300-01	AT3G45970.1	20706207
AT4G35620.1	Os07t0475400-01	AT3G45970.1	20706207
AT4G35620.1	Os10t0542400-01	AT3G45970.1	20706207
AT4G35620.1	Os09t0553100-00	AT3G53730.1	20706207
AT4G35620.1	Os04t0485000-01	AT4G24820.1	20706207
AT4G35620.1	Os01t0803200-01	AT5G12140.1	20706207
AT4G35620.1	Os05t0494200-02	AT5G12140.1	20706207
AT4G35620.1	Os03t0710800-01	AT5G38480.1	20706207
AT4G35620.1	Os11t0546900-01	AT5G38480.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20945	Sorghum	nucleus	85.44	84.43
Zm00001d036360_P002	Maize	nucleus	83.05	82.08
TraesCS7D01G536000.1	Wheat	nucleus	79.71	79.71
TraesCS7A01G549500.1	Wheat	nucleus	79.47	79.47
TraesCS7B01G472800.1	Wheat	nucleus	79.24	79.24
HORVU7Hr1G121820.6	Barley	nucleus	78.52	78.33
CDY31481	Canola	nucleus	35.56	68.66
HORVU0Hr1G022770.1	Barley	nucleus, plastid	44.63	67.27
GSMUA_Achr5P19270_001	Banana	cytosol	34.37	66.36
PGSC0003DMT400075380	Potato	nucleus	37.47	66.24
GSMUA_Achr11P...	Banana	nucleus	60.86	62.5
GSMUA_Achr5P19110_001	Banana	nucleus	62.05	61.32
GSMUA_Achr8P13320_001	Banana	nucleus	60.62	60.48
Solyc04g082430.2.1	Tomato	nucleus	56.56	60.31
VIT_18s0001g14170.t01	Wine grape	nucleus	62.29	59.18
CDY33634	Canola	nucleus	56.32	57.84
Bra016460.1-P	Field mustard	nucleus	56.56	57.8
CDX96631	Canola	nucleus	56.32	57.56
PGSC0003DMT400025854	Potato	nucleus	60.38	57.37
Os04t0563700-01	Rice	mitochondrion	56.8	56.67
Bra003727.1-P	Field mustard	nucleus	51.79	56.66
CDX85942	Canola	nucleus	55.13	56.62
KRH76553	Soybean	nucleus	58.23	56.48
VIT_03s0038g02800.t01	Wine grape	nucleus, plastid	56.56	55.9
KRH28901	Soybean	nucleus	57.76	55.89
Bra015762.1-P	Field mustard	nucleus	57.28	55.68
CDX87612	Canola	nucleus	57.04	55.45
CDX88261	Canola	nucleus	56.8	55.35
Bra025831.1-P	Field mustard	nucleus	53.94	55.12
CDX68105	Canola	nucleus	51.79	54.94
KRH60628	Soybean	nucleus	52.98	54.81
CDY29520	Canola	nucleus	53.46	54.63
KRH51329	Soybean	nucleus, plastid	53.94	54.46
AT1G20610.1	Thale cress	nucleus	55.13	53.85
PGSC0003DMT400048062	Potato	nucleus	55.13	53.6
PGSC0003DMT400003868	Potato	nucleus	55.13	53.35
Solyc12g094600.1.1	Tomato	nucleus	53.94	53.18
Solyc03g032190.2.1	Tomato	nucleus	54.65	53.13
PGSC0003DMT400093973	Potato	nucleus	41.77	53.03
Solyc02g082820.2.1	Tomato	nucleus	54.65	52.77
AT1G76310.3	Thale cress	nucleus	57.76	52.72
AT1G20590.1	Thale cress	cytosol, golgi, nucleus, plastid	32.46	51.32
Solyc02g061650.1.1	Tomato	nucleus	42.96	51.28
CDX72551	Canola	nucleus	48.93	51.12
CDY30357	Canola	nucleus	49.88	51.1
CDY26816	Canola	nucleus	49.4	50.86
Bra037265.1-P	Field mustard	nucleus	49.64	50.86
CDY29184	Canola	nucleus	50.84	50.84
Bra024504.1-P	Field mustard	nucleus	50.84	50.84
CDY07838	Canola	nucleus	50.6	50.72
AT4G35620.1	Thale cress	nucleus	51.79	50.58
CDY67210	Canola	nucleus	48.69	50.25
Bra017726.1-P	Field mustard	nucleus	48.69	50.25
AT2G17620.1	Thale cress	nucleus	50.84	49.65
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	61.58	38.62
Os01t0281200-01	Rice	nucleus	36.99	36.64
Os05t0237100-01	Rice	extracellular	16.71	35.53
Os05t0493500-00	Rice	nucleus	36.99	31.83
Os02t0627800-00	Rice	cytosol, mitochondrion, peroxisome	29.36	31.06
Os12t0581800-01	Rice	nucleus, plastid	24.58	26.75
Os12t0502300-01	Rice	nucleus, plastid	28.88	24.69
Os12t0298950-00	Rice	nucleus	26.25	24.61
Os01t0233100-00	Rice	nucleus, plastid	27.45	23.42
Os01t0233500-01	Rice	nucleus, plastid	27.45	22.64
Os03t0208700-00	Rice	nucleus	21.24	21.76
Os03t0607600-00	Rice	nucleus	24.82	17.11
Os03t0208800-00	Rice	nucleus	8.83	9.32

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.2	EntrezGene:4342121	EMBL:AK070518	ProteinID:BAD61808.1	ProteinID:BAF20546.1
ProteinID:BAS99605.1	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0007049	GO:GO:0008150	GO:GO:0009987
GO:GO:0051301	EnsemblPlantsGene:Os06g0726800	EnsemblPlants:Os06t0726800-01	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771
ScanProsite:PS00292	PANTHER:PTHR10177	PANTHER:PTHR10177:SF338	UniProt:Q0D9C7	SMART:SM00385	SMART:SM01332
SUPFAM:SSF47954	UniParc:UPI0000450671	RefSeq:XP_015641959.1	RefSeq:XP_015641961.1	SEG:seg	:

Description

CYCLIN-B2-2G2/mitotic-specific cyclin 2 (B-like cyclin) (CycOs2). (Os06t0726800-01)

Coordinates

chr6:-:30915125..30918862

Molecular Weight (calculated)

47506.7 Da

IEP (calculated)

5.855

GRAVY (calculated)

-0.214

Length

419 amino acids

Sequence
(BLAST)

001: MENMRSENFN QGVSMEGVKH APEMANTNRR ALRDIKNIIG APHQHMAVSK RGLLDKPAAK NQAGHRPMTR KFAATLANQP SSAPLAPIGS ERQKRTADSA
101: FHGPADMECT KITSDDLPLP MMSEMDEVMG SELKEIEMED IEEAAPDIDS CDANNSLAVV EYVDEIYSFY RRSEGLSCVS PNYMLSQNDI NEKMRGILID
201: WLIEVHYKLE LLDETLFLTV NIIDRFLARE NVVRKKLQLV GVTAMLLACK YEEVSVPVVE DLILICDRAY TRTDILEMER MIVNTLQFDM SVPTPYCFMR
301: RFLKAAQSDK KLELMSFFII ELSLVEYEML KFQPSMLAAA AIYTAQCTIN GFKSWNKCCE LHTKYSEEQL MECSKMMVEL HQKAGHGKLT GVHRKYSTFR
401: YGCAAKSEPA VFLLKSVAL

Best Arabidopsis Sequence Match ( AT1G20610.1 )
(BLAST)

001: MVRSDENSLG LIGSMSLQGG GVVGKIKTTA TTGPTRRALS TINKNITEAP SYPYAVNKRS VSERDGICNK PPVHRPVTRK FAAQLADHKP HIRDEETKKP
101: DSVSSEEPET IIIDVDESDK EGGDSNEPMF VQHTEAMLEE IEQMEKEIEM EDADKEEEPV IDIDACDKNN PLAAVEYIHD MHTFYKNFEK LSCVPPNYMD
201: NQQDLNERMR GILIDWLIEV HYKFELMEET LYLTINVIDR FLAVHQIVRK KLQLVGVTAL LLACKYEEVS VPVVDDLILI SDKAYSRREV LDMEKLMANT
301: LQFNFSLPTP YVFMKRFLKA AQSDKKLEIL SFFMIELCLV EYEMLEYLPS KLAASAIYTA QCTLKGFEEW SKTCEFHTGY NEKQLLACAR KMVAFHHKAG
401: TGKLTGVHRK YNTSKFCHAA RTEPAGFLI

Arabidopsis Description

CYCB2-3Cyclin-B2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.