Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0233100-00 | nucleus |
| Os01t0233500-01 | nucleus |
| Os01t0267900-01 | |
| Os01t0279300-01 | |
| Os01t0281200-01 | cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol |
| Os01t0810300-01 | |
| Os02t0123100-01 | |
| Os02t0627800-00 | cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol |
| Os03t0146300-01 | cytosol, cytosol, nucleus, nucleus |
| Os03t0203800-01 | nucleus |
| Os03t0208700-00 | nucleus |
| Os03t0208800-00 | nucleus |
| Os03t0319300-01 | |
| Os03t0607600-00 | nucleus |
| Os03t0617500-01 | nucleus |
| Os03t0743500-02 | |
| Os04t0112200-00 | |
| Os04t0563700-01 | |
| Os04t0661900-01 | |
| Os05t0237100-01 | nucleus |
| Os05t0491000-01 | |
| Os05t0491100-01 | |
| Os05t0493500-00 | cytoskeleton, cytoskeleton, cytosol, cytosol, cytosol, cytosol |
| Os06t0236600-00 | |
| Os06t0726800-01 | |
| Os07t0143700-01 | |
| Os07t0556000-01 | nucleus |
| Os07t0687200-02 | |
| Os08t0250200-01 | |
| Os08t0512600-01 | cytosol, nucleus |
| Os09t0111100-01 | |
| Os09t0382300-00 | |
| Os11t0217300-01 | |
| Os12t0298950-00 | nucleus |
| Os12t0502300-01 | nucleus, nucleus |
| Os12t0581800-01 | nucleus |
| Os12t0588800-01 | nucleus |
| Os12t0603800-00 | |
| Os12t0611200-01 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G248700.1 | Wheat | cytosol | 88.96 | 88.96 |
| TraesCS7D01G247700.1 | Wheat | cytosol | 88.96 | 88.96 |
| TraesCS7B01G142600.1 | Wheat | cytosol | 88.96 | 88.96 |
| EER90152 | Sorghum | cytosol, mitochondrion, peroxisome | 86.2 | 86.46 |
| Zm00001d046912_P001 | Maize | cytosol, mitochondrion, peroxisome | 85.58 | 85.85 |
| Zm00001d031485_P001 | Maize | mitochondrion | 86.2 | 85.41 |
| GSMUA_Achr3P03700_001 | Banana | cytosol | 78.22 | 84.44 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 81.6 | 79.64 |
| GSMUA_Achr9P12350_001 | Banana | cytosol | 76.99 | 77.95 |
| KRH37522 | Soybean | cytosol | 74.85 | 76.97 |
| KRH06014 | Soybean | cytosol | 73.93 | 76.75 |
| GSMUA_Achr11P... | Banana | cytosol | 78.22 | 76.35 |
| AT1G20930.1 | Thale cress | cytosol | 72.7 | 75.24 |
| KRH48128 | Soybean | cytosol | 72.39 | 74.92 |
| CDY31856 | Canola | cytosol | 72.09 | 74.37 |
| CDY01345 | Canola | cytosol | 72.09 | 74.37 |
| Bra012258.1-P | Field mustard | cytosol | 72.09 | 74.37 |
| AT1G76540.1 | Thale cress | cytosol | 71.17 | 74.12 |
| VIT_18s0122g00550.t01 | Wine grape | cytosol | 73.31 | 73.99 |
| Bra015735.1-P | Field mustard | cytosol | 70.86 | 73.8 |
| PGSC0003DMT400025910 | Potato | cytosol | 71.17 | 73.65 |
| Solyc04g082840.2.1 | Tomato | cytosol | 71.17 | 73.65 |
| CDX87588 | Canola | cytosol | 70.55 | 73.48 |
| CDX88294 | Canola | cytosol | 69.94 | 72.84 |
| KRH17547 | Soybean | cytosol | 73.62 | 71.22 |
| OQU80908 | Sorghum | mitochondrion | 85.58 | 66.11 |
| Os01t0897000-01 | Rice | cytosol | 60.74 | 65.35 |
| Os02t0123100-01 | Rice | mitochondrion | 48.77 | 42.29 |
| Os10t0580300-01 | Rice | cytosol, plasma membrane | 39.57 | 27.16 |
| Os03t0847600-01 | Rice | cytosol | 31.6 | 23.79 |
| Os02t0700600-01 | Rice | plasma membrane | 30.98 | 22.0 |
| Os04t0488000-01 | Rice | nucleus | 41.72 | 19.15 |
| Os02t0602100-02 | Rice | nucleus | 39.88 | 18.76 |
| Os02t0602400-01 | Rice | cytosol | 0.0 | 0.0 |
Protein Annotations
Description
CYCLIN-DEPENDENT KINASE B2;1B-type plant-specific cyclin-dependent kinase, DNA damage response (Os08t0512600-01)
Coordinates
chr8:+:25419884..25421722
Molecular Weight (calculated)
36979.0 Da
IEP (calculated)
8.929
GRAVY (calculated)
-0.306
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALHHQAAA APVTTTTDGG ELRAMDLYEK LEKVGEGTYG KVYKAREKAT GRIVALKKTR LPEDDEGVPP TALREVSLLR MLSQDSHVVR LLDLKQGQNK
101: EGQTILYLVF EYMDTDLKKF IRAHRQNLQK IPVPTVKILM YQLCKGVAFC HGRGVLHRDL KPHNLLMDRK TMALKIADLG LSRSFTVPLK KYTHEILTLW
201: YRAPEVLLGA AHYSTPVDIW SVGCIFAELA TNQPLFAGDS EVQQLLHIFK LLGTPNEQVW PGVSKLPNWH EYPQWNPSKV SDLVHGLDAD ALDLLEKMLQ
301: YEPSKRISAK KAMEHPYFND VNKELY
101: EGQTILYLVF EYMDTDLKKF IRAHRQNLQK IPVPTVKILM YQLCKGVAFC HGRGVLHRDL KPHNLLMDRK TMALKIADLG LSRSFTVPLK KYTHEILTLW
201: YRAPEVLLGA AHYSTPVDIW SVGCIFAELA TNQPLFAGDS EVQQLLHIFK LLGTPNEQVW PGVSKLPNWH EYPQWNPSKV SDLVHGLDAD ALDLLEKMLQ
301: YEPSKRISAK KAMEHPYFND VNKELY
001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL
Arabidopsis Description
CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.