Factsheet for Os02t0700600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07406	Sorghum	cytosol	85.84	86.4
TraesCS6D01G245500.3	Wheat	cytosol	85.84	85.65
HORVU6Hr1G068270.1	Barley	cytosol	85.62	85.25
HORVU0Hr1G016660.4	Barley	cytosol	85.62	85.25
TraesCS6B01G296700.2	Wheat	cytosol	85.4	85.22
TraesCS6A01G269400.1	Wheat	cytosol	85.19	85.0
Zm00001d000169_P009	Maize	cytosol	84.97	84.05
Zm00001d017729_P023	Maize	cytosol	85.84	80.41
PGSC0003DMT400065635	Potato	cytosol	47.06	69.23
Solyc08g067450.1.1	Tomato	cytosol	45.97	67.41
GSMUA_Achr2P17970_001	Banana	cytosol	57.08	65.83
VIT_09s0070g00320.t01	Wine grape	cytosol	35.95	62.98
VIT_02s0033g01110.t01	Wine grape	cytosol	61.44	62.39
GSMUA_Achr11P...	Banana	mitochondrion	58.17	62.24
KRH76377	Soybean	cytosol	60.13	61.33
PGSC0003DMT400047517	Potato	cytosol	60.13	61.33
Solyc08g005470.2.1	Tomato	cytosol	59.91	60.98
KRH39665	Soybean	cytosol	59.7	60.22
KRH07697	Soybean	nucleus	57.95	58.98
KRH07201	Soybean	cytosol	52.51	57.93
Solyc08g075890.2.1	Tomato	cytosol	57.08	57.84
AT4G19110.2	Thale cress	cytosol	57.95	57.33
CDY01580	Canola	cytosol	57.52	57.27
CDX76497	Canola	cytosol	57.08	56.83
Bra025077.1-P	Field mustard	cytosol	53.38	56.71
CDY09272	Canola	cytosol	56.86	56.62
Bra020977.1-P	Field mustard	cytosol	56.64	56.4
CDY38979	Canola	cytosol	53.81	56.39
CDY13047	Canola	cytosol	53.81	53.12
CDY39427	Canola	cytosol	52.94	50.62
AT5G45430.1	Thale cress	cytosol	53.81	49.5
Bra021977.1-P	Field mustard	cytosol	34.86	45.07
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	54.47	44.41
Os03t0847600-01	Rice	cytosol	41.18	43.65
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	53.38	43.21
Os01t0897000-01	Rice	cytosol	21.79	33.0
Os08t0512600-01	Rice	cytosol, plasma membrane	22.0	30.98
Os02t0123100-01	Rice	mitochondrion	23.31	28.46
Os10t0580300-01	Rice	cytosol, plasma membrane	26.58	25.68
Os02t0602100-02	Rice	nucleus	27.02	17.89
Os04t0488000-01	Rice	nucleus	27.23	17.61
Os02t0602400-01	Rice	cytosol	0.22	0.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.7	Gene3D:3.30.200.20	EntrezGene:4330434	EMBL:AK100056	EMBL:AK100966
ProteinID:BAD07520.1	ProteinID:BAD07521.1	ProteinID:BAD07891.1	ProteinID:BAD07892.1	ProteinID:BAF09755.1	ProteinID:BAS80463.1
ProteinID:BAS80465.1	ProteinID:BAS80466.1	ProteinID:EEE57632.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004693	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008353
GO:GO:0009987	GO:GO:0010468	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	GO:GO:0051726	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os02g0700600	EnsemblPlants:Os02t0700600-01
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF336	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q6Z8C8	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000236706	RefSeq:XP_015626442.1	RefSeq:XP_015626443.1	RefSeq:XP_015626444.1	:

Description

CYCLIN-DEPENDENT KINASE F;4Similar to GAMYB-binding protein. (Os02t0700600-01);Similar to Cyclin-dependent kinase F-4. (Os02t0700600-02);Similar to cDNA clone:J013158B11, full insert sequence. (Os02t0700600-03);Similar to Cyclin-dependent kinase F-4. (Os02t0700600-04);Non-protein coding transcript. (Os02t0700600-05)

Coordinates

chr2:+:28820864..28826606

Molecular Weight (calculated)

51722.9 Da

IEP (calculated)

10.196

GRAVY (calculated)

-0.416

Length

459 amino acids

Sequence
(BLAST)

001: MDRFKMIKEV GDGTFGSVWR AINKQNGEVV AVKKMKRKYY SFEECMSLRE VKSLRRMNHP NIVKLKEVIR ENDILYFIME YMECNLYQLM KDRVKPFSEA
101: EVRNWCFQIF QALAYMHQRG YFHRDLKPEN LLVSKDVIKL ADFGLAREVT SVPPYTEYVS TRWYRAPEVL LQSSIYDSAV DMWAMGAIMA ELLTLHPLFP
201: GTSEADEILK ICNVIGSPDE QSWPQGLSLA ETMKFQFPQV SGNQLAEVMT SVSSEAVDLI SSLCSWDPCK RPKAAEVLQH TFFQGCTFVP PTVRSKAGVL
301: PKTPPCVGVK GVSEHGMPRR YSTGTLSTTK PHSNASLKSS GLSKTGVQRK LQMDRQAPQK IKKPTESNNK LTTNRVPARN SPGHPVLRHS RSLPETGRAT
401: MHKVSTLTER LTHMSVTSRT RTTPKPAAPL LKAGLGKSDL LGKTDEIPPA KRLTRKLVS

Best Arabidopsis Sequence Match ( AT4G19110.1 )
(BLAST)

001: MDRYKLIKEV GDGTFGSVWR AINKQTGEVV AIKKMKKKYY SWDECINLRE VKSLRRMNHP NIVKLKEVIR ENDILYFVFE YMECNLYQLM KDRQKLFAEA
101: DIKNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDIIKI ADFGLAREVN SSPPFTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMA ELLSLRPIFP
201: GASEADEIYK ICSVIGTPTE ETWLEGLNLA NTINYQFPQL PGVPLSSLMP SASEDAINLI ERLCSWDPSS RPTAAEVLQH PFFQSCFYVP PSLRPKPSVA
301: RTPPPVGPRG SFEHQSVKRY PVSLANAKPF NSYVSPKSNA AFGSGVQRKL DMVNQDGTRN TKPVRSSVRD SKYRPPGKKS PPAASLNKNR VTRSSVSETA
401: DKLANMTIGA TGSRRHSVSV VGQHQQLKPP PMKAGWVGET RDMFLRPTQP TTNAYSRKVA G

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.