Factsheet for Os02t0602400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0847600-01	Rice	cytosol	0.74	0.46
Os02t0602100-02	Rice	nucleus	0.74	0.29
Os04t0488000-01	Rice	nucleus	0.74	0.28
Os02t0700600-01	Rice	plasma membrane	0.37	0.22
Os01t0897000-01	Rice	cytosol	0.0	0.0
Os02t0123100-01	Rice	mitochondrion	0.0	0.0
Os08t0512600-01	Rice	cytosol, plasma membrane	0.0	0.0
Os10t0580300-01	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.25.70.10	MapMan:15.6.2.2	ProteinID:BAD19344.1	ProteinID:BAD22170.1	ProteinID:BAF09271.1	ProteinID:BAS79627.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003690	GO:GO:0003723	GO:GO:0003727
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0008380	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0019843	GO:GO:0032502
GO:GO:0042255	InterPro:IPR038538	InterPro:MTERF	InterPro:MTERF_sf	EnsemblPlantsGene:Os02g0602400	EnsemblPlants:Os02t0602400-01
PFAM:PF02536	PANTHER:PTHR13068	PANTHER:PTHR13068:SF9	UniProt:Q6K5F5	SMART:SM00733	UniParc:UPI0000375827

Description

Mitochodrial transcription termination factor-related family protein. (Os02t0602400-01);Hypothetical conserved gene. (Os02t0602400-02)

Coordinates

chr2:+:23575780..23578280

Molecular Weight (calculated)

31244.3 Da

IEP (calculated)

9.626

GRAVY (calculated)

-0.212

Length

271 amino acids

Sequence
(BLAST)

001: MDHEEIKNVV RKFPAFAYYN VDRKIKPLVA LLLELGVPRS NIPGIIKKRP QLCGISLSDN LKPMMTYLEN VGINKDKWSK VLSRFPALLT YSRQKVETTV
101: SFLTELGVPK ENIGKILTRC PHIMSYSVND NLRPTAEYFQ SIGADAASLI QKSPQAFGLN IEAKLKPITE FFLERDFTME EIGTMANRFG IIHTLSMEDN
201: LLPKYEYFLT MGYPRNELVK FPQYFGYSLE QRIKPRYARM IDCGVRLILN QLLSVSDSRF EDILRKRMDG I

Best Arabidopsis Sequence Match ( AT4G14605.2 )
(BLAST)

001: MQSLSQLGPS EIFLVARREK PSTRAQLWFT GRLSFRQETN GIRLKNRVEF SPRPVPPNLI AAEKEEAKAV LTLFFKKQGL SNSLSSRLIN KSDLFIDHLV
101: SRLHSVHKAR YLVGRELTTL EIRDSLIPYL EQLHEEHGDL LAELVVSFPD PPAEPRLVAS SPVSVLPPRG DTDSAADTRK LRAVSRVSEL DTEGALRPQT
201: LYLLDLGLNL EQIKTITRKF AAFPYYSLDG KIKPVVEFLL DLGIPKSDIP TILCKRPQIC GISLTDNLKP TMAFLETLGI DKNQWAKIIS RFPAILTYSR
301: QKLTSTVEFL SQTGLTEEQI GRILTRCPNI MSYSVEDKLR PTMEYFRSLN VDVAVLLHRC PQTFGLSIES NLKPVTEFFL EKGFGLDEIG IMISRYGALY
401: TFSLKENVMP KWDYFQTMDY PKSELVKFPQ FFGYSLQERI KPRYELVQRS GVRLLLNQVL SLSGIEFEKV VKKKMMKLVS NNVIAEQSSG GLL

Arabidopsis Description

MTERF5Transcription termination factor MTERF5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4JVI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.