Factsheet for GSMUA_Achr2P17970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	79.4	73.66
PGSC0003DMT400065635	Potato	cytosol	55.28	70.51
Solyc08g067450.1.1	Tomato	cytosol	53.77	68.37
GSMUA_Achr7P04820_001	Banana	cytosol	67.34	68.02
VIT_09s0070g00320.t01	Wine grape	cytosol	42.21	64.12
VIT_02s0033g01110.t01	Wine grape	cytosol	69.1	60.84
KRH76377	Soybean	cytosol	67.34	59.56
KRH07697	Soybean	nucleus	67.09	59.2
KRH39665	Soybean	cytosol	67.09	58.68
Solyc08g005470.2.1	Tomato	cytosol	65.58	57.87
PGSC0003DMT400047517	Potato	cytosol	65.33	57.78
HORVU0Hr1G016660.4	Barley	cytosol	66.33	57.27
HORVU6Hr1G068270.1	Barley	cytosol	66.33	57.27
GSMUA_Achr1P15530_001	Banana	cytosol	66.58	57.24
Bra025077.1-P	Field mustard	cytosol	62.06	57.18
Os02t0700600-01	Rice	plasma membrane	65.83	57.08
TraesCS6D01G245500.3	Wheat	cytosol	65.83	56.96
TraesCS6A01G269400.1	Wheat	cytosol	65.83	56.96
TraesCS6B01G296700.2	Wheat	cytosol	65.58	56.74
CDY38979	Canola	cytosol	62.31	56.62
EES07406	Sorghum	cytosol	64.82	56.58
KRH07201	Soybean	cytosol	58.79	56.25
Solyc08g075890.2.1	Tomato	cytosol	63.32	55.63
CDY01580	Canola	cytosol	63.57	54.88
Zm00001d000169_P009	Maize	cytosol	63.57	54.53
AT4G19110.2	Thale cress	cytosol	63.07	54.09
CDX76497	Canola	cytosol	62.31	53.8
Bra020977.1-P	Field mustard	cytosol	62.31	53.8
CDY09272	Canola	cytosol	61.81	53.36
CDY13047	Canola	cytosol	61.81	52.9
Zm00001d017729_P023	Maize	cytosol	64.82	52.65
CDY39427	Canola	cytosol	61.31	50.83
AT5G45430.1	Thale cress	cytosol	61.56	49.1
Bra021977.1-P	Field mustard	cytosol	40.2	45.07
GSMUA_Achr8P00940_001	Banana	cytosol	50.0	44.22
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	62.06	43.87
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	61.81	43.39
GSMUA_Achr3P26790_001	Banana	cytosol	24.62	36.84
GSMUA_Achr4P04710_001	Banana	cytosol	27.14	36.73
GSMUA_Achr11P...	Banana	cytosol	27.14	36.73
GSMUA_Achr11P...	Banana	cytosol	27.14	35.64
GSMUA_Achr11P...	Banana	cytosol	24.87	35.23
GSMUA_Achr4P04700_001	Banana	cytosol, extracellular	27.39	34.6
GSMUA_Achr8P00030_001	Banana	cytosol	26.63	34.42
GSMUA_Achr3P03700_001	Banana	cytosol	25.88	34.11
GSMUA_Achr4P02420_001	Banana	cytosol	20.6	34.02
GSMUA_Achr9P12350_001	Banana	cytosol	25.38	31.37
GSMUA_Achr11P...	Banana	cytosol	24.87	29.64
GSMUA_Achr11P...	Banana	cytosol	29.4	25.11
GSMUA_Achr3P09020_001	Banana	cytosol	29.4	24.79
GSMUA_Achr5P18030_001	Banana	cytosol	28.89	24.63
GSMUA_Achr9P17590_001	Banana	cytosol	29.15	23.15
GSMUA_Achr8P01120_001	Banana	nucleus	30.15	20.76
GSMUA_Achr8P08900_001	Banana	nucleus	29.9	18.34
GSMUA_Achr5P25400_001	Banana	nucleus	30.15	17.19
GSMUA_Achr11P...	Banana	nucleus	29.15	16.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr2G17970_001	EnsemblPlants:GSMUA_Achr2P17970_001	EnsemblPlants:GSMUA_Achr2T17970_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0S8Y8
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF336	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00029648F3	:	:	:	:	:

Description

Cyclin-dependent kinase F-4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17970_001]

Coordinates

chr2:-:18418361..18425702

Molecular Weight (calculated)

45336.8 Da

IEP (calculated)

9.514

GRAVY (calculated)

-0.386

Length

398 amino acids

Sequence
(BLAST)

001: MEKYKLIKEV GDGTFGTVWR AINKQSGEVV AIKKMKRKYY SWEECVNLRE VKSLRRMNHP NIVKLKEVIR ENDMLYLVFE YMECNLYQIM KDKSKGFSES
101: EIRNWYFQIF QALAYMHQRG YFHRDLKPEN LLVTKDIIKI ADFGLAREVS SQPPYTEYVS TRWYRAPEVL LQSSIYDAAV DMWAMGAIMA ELFTLCPLFP
201: GSSEADEIYK ICSVIGSPNE NSWAEGLQLA DVLKYQFPQC SAVQLEALIP SASKEAVNLI KALCSWDPCR RPKATEALQH PFFKACLRIH PSFHSRLAGL
301: SHTPPVGNKG ALGQNGTRRY STGPLSVTRS ANNFISTKAN GSLRAGVQRK LEMNDKELEK NGRSLGNNLR QSRYKPPARN NTGKLFGVLG CPIQLFDC

Best Arabidopsis Sequence Match ( AT4G19110.2 )
(BLAST)

001: MDRYKLIKEV GDGTFGSVWR AINKQTGEVV AIKKMKKKYY SWDECINLRE VKSLRRMNHP NIVKLKEVIR ENDILYFVFE YMECNLYQLM KDRQKLFAEA
101: DIKNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDIIKI ADFGLAREVN SSPPFTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMA ELLSLRPIFP
201: GASEADEIYK ICSVIGTPTE ETWLEGLNLA NTINYQFPQL PGVPLSSLMP SASEDAINLI ERLCSWDPSS RPTAAEVLQH PFFQSCFYVP PSLRPKPSVA
301: RTPPPVGPRG SFEHQSVKRY PVSLANAKPF NSYVSPKSNA AFGSGVQRKL DMVNQDGTRN TKPVRSSVRD SKYRPPGKKS PHNAAAASLN KNRVTRSSVS
401: ETADKLANMT IGATGSRRHS VSVVGQHQQL KPPPMKAGWV GETRDMFLRP TQPTTNAYSR KVAG

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.