Factsheet for GSMUA_Achr3P26790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P04710_001	Banana	cytosol	81.95	74.15
TraesCS4B01G353600.1	Wheat	cytosol	78.57	71.09
TraesCS5A01G521700.1	Wheat	cytosol	78.57	71.09
GSMUA_Achr11P...	Banana	cytosol	78.2	70.75
KXG40336	Sorghum	cytosol	77.82	70.41
Zm00001d048497_P002	Maize	cytosol	78.57	68.98
GSMUA_Achr11P...	Banana	cytosol	72.56	68.68
GSMUA_Achr8P00030_001	Banana	cytosol	77.82	67.21
TraesCS4D01G347600.1	Wheat	cytosol	78.57	63.91
HORVU4Hr1G085830.4	Barley	cytosol	78.2	61.0
GSMUA_Achr4P04700_001	Banana	cytosol, extracellular	70.3	59.37
Zm00001d027373_P003	Maize	cytosol	78.2	56.68
GSMUA_Achr11P...	Banana	cytosol	54.51	47.85
GSMUA_Achr3P03700_001	Banana	cytosol	51.88	45.7
GSMUA_Achr9P12350_001	Banana	cytosol	50.75	41.93
GSMUA_Achr11P...	Banana	cytosol	50.38	40.12
GSMUA_Achr4P02420_001	Banana	cytosol	35.34	39.0
GSMUA_Achr2P17970_001	Banana	cytosol	36.84	24.62
GSMUA_Achr3P09020_001	Banana	cytosol	43.61	24.58
GSMUA_Achr11P...	Banana	cytosol	42.48	24.25
GSMUA_Achr5P18030_001	Banana	cytosol	42.48	24.2
GSMUA_Achr7P04820_001	Banana	cytosol	35.71	24.11
GSMUA_Achr9P17590_001	Banana	cytosol	43.61	23.15
GSMUA_Achr11P...	Banana	mitochondrion	36.47	22.61
GSMUA_Achr8P00940_001	Banana	cytosol	37.22	22.0
GSMUA_Achr1P15530_001	Banana	cytosol	36.84	21.17
GSMUA_Achr8P01120_001	Banana	nucleus	42.86	19.72
GSMUA_Achr8P08900_001	Banana	nucleus	43.98	18.03
GSMUA_Achr5P25400_001	Banana	nucleus	44.36	16.91
GSMUA_Achr11P...	Banana	nucleus	43.98	16.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.1	MapMan:18.4.3.1.1	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr3G26790_001	EnsemblPlants:GSMUA_Achr3P26790_001	EnsemblPlants:GSMUA_Achr3T26790_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SI45
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF323
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294858D	:

Description

Cyclin-dependent kinase A-1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G26790_001]

Coordinates

chr3:-:26498964..26505970

Molecular Weight (calculated)

30753.6 Da

IEP (calculated)

7.899

GRAVY (calculated)

-0.148

Length

266 amino acids

Sequence
(BLAST)

001: MIALKKIRLE REDLGVPGTA IREVSLLKEM KHDNIVRLHD VVHSEKSIYL VFEYMDMDLK KHMDSHPEFF KDTCLIKSFL CQILRGIAYC HSHRVLHRDL
101: KPQNLLIEKR TNTLKLADFG LARAFGIPIR TFTQEVVTLW YRAPEILLGC HQYSTPIDVW SVGCIFAEMV NQKPLFPGES EIDQLRTIFR VLGTPNEETW
201: PGVTSFPDFK SSFTIWRRRD LATVVPTLEP AGIDLLSKML CWEPGKRIHA REALQHEYLK DLGAVP

Best Arabidopsis Sequence Match ( AT1G20930.1 )
(BLAST)

001: MDNNGVKPAV SAMEAFEKLE KVGEGTYGKV YRAREKATGM IVALKKTRLH EDEEGVPPTT LREISILRML ARDPHIVRLM DVKQGINKEG KTVLYLVFEY
101: VDTDLKKFIR SFRQAGQNIP QNTVKCLMYQ LCKGMAFCHG HGVLHRDLKP HNLLMDRKTM TLKIADLGLA RAFTLPMKKY THEILTLWYR APEVLLGATH
201: YSTGVDMWSV GCIFAELVTK QAIFAGDSEL QQLLRIFRLL GTPNEEVWPG VSKLKDWHEY PQWKPLSLST AVPNLDEAGL DLLSKMLEYE PAKRISAKKA
301: MEHPYFDDLP DKSSL

Arabidopsis Description

CDKB2-2Cyclin-dependent kinase B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LG64]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.