Factsheet for GSMUA_Achr1P15530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P04820_001	Banana	cytosol	66.09	77.67
PGSC0003DMT400065635	Potato	cytosol	45.79	67.95
GSMUA_Achr2P17970_001	Banana	cytosol	57.24	66.58
Solyc08g067450.1.1	Tomato	cytosol	44.71	66.13
VIT_09s0070g00320.t01	Wine grape	cytosol	37.15	65.65
VIT_02s0033g01110.t01	Wine grape	cytosol	62.63	64.16
KRH76377	Soybean	cytosol	60.91	62.67
PGSC0003DMT400047517	Potato	cytosol	60.69	62.44
Solyc08g005470.2.1	Tomato	cytosol	60.26	61.86
KRH07697	Soybean	nucleus	59.83	61.42
KRH39665	Soybean	cytosol	60.26	61.32
GSMUA_Achr11P...	Banana	mitochondrion	55.94	60.37
Solyc08g075890.2.1	Tomato	cytosol	58.96	60.26
KRH07201	Soybean	cytosol	53.78	59.86
AT4G19110.2	Thale cress	cytosol	58.53	58.41
CDY01580	Canola	cytosol	57.24	57.48
CDX76497	Canola	cytosol	57.02	57.27
CDY09272	Canola	cytosol	56.59	56.83
Bra020977.1-P	Field mustard	cytosol	56.59	56.83
Bra025077.1-P	Field mustard	cytosol	52.7	56.48
CDY38979	Canola	cytosol	52.92	55.94
CDY13047	Canola	cytosol	52.92	52.69
CDY39427	Canola	cytosol	52.27	50.42
AT5G45430.1	Thale cress	cytosol	54.21	50.3
Bra021977.1-P	Field mustard	cytosol	34.99	45.63
CDY23116	Canola	endoplasmic reticulum, nucleus, plasma membrane	53.35	43.87
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	53.13	43.39
GSMUA_Achr8P00940_001	Banana	cytosol	41.47	42.67
GSMUA_Achr11P...	Banana	cytosol	23.33	38.43
GSMUA_Achr4P04710_001	Banana	cytosol	23.54	37.07
GSMUA_Achr11P...	Banana	cytosol	23.54	37.07
GSMUA_Achr3P26790_001	Banana	cytosol	21.17	36.84
GSMUA_Achr8P00030_001	Banana	cytosol	23.97	36.04
GSMUA_Achr3P03700_001	Banana	cytosol	22.25	34.11
GSMUA_Achr11P...	Banana	cytosol	22.03	33.66
GSMUA_Achr4P04700_001	Banana	cytosol, extracellular	22.68	33.33
GSMUA_Achr4P02420_001	Banana	cytosol	17.06	32.78
GSMUA_Achr9P12350_001	Banana	cytosol	21.6	31.06
GSMUA_Achr11P...	Banana	cytosol	21.6	29.94
GSMUA_Achr5P18030_001	Banana	cytosol	25.7	25.48
GSMUA_Achr3P09020_001	Banana	cytosol	25.7	25.21
GSMUA_Achr11P...	Banana	cytosol	25.27	25.11
GSMUA_Achr9P17590_001	Banana	cytosol	25.7	23.75
GSMUA_Achr8P01120_001	Banana	nucleus	25.7	20.59
GSMUA_Achr8P08900_001	Banana	nucleus	25.27	18.03
GSMUA_Achr5P25400_001	Banana	nucleus	25.7	17.05
GSMUA_Achr11P...	Banana	nucleus	25.27	16.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.3.7	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G15530_001	EnsemblPlants:GSMUA_Achr1P15530_001	EnsemblPlants:GSMUA_Achr1T15530_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0S061
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24055
PANTHER:PTHR24055:SF336	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295A6DD	:	:	:	:	:

Description

Cyclin-dependent kinase F-4 [Source:GMGC_GENE;Acc:GSMUA_Achr1G15530_001]

Coordinates

chr1:+:11649505..11654756

Molecular Weight (calculated)

52794.6 Da

IEP (calculated)

9.809

GRAVY (calculated)

-0.427

Length

463 amino acids

Sequence
(BLAST)

001: MERYMVIKEV GDGTFGTVWR AINKQSGEVV AIKQMKRKYY SWEECLNLRE VKCLRRLNHP NIIKLKEVIR ENDVLYLVFE YMECNLYQLM KDRNKPFTED
101: EIRDWCFQIF RALAYMHHRG YFHRDLKPEN LLVTKNVLKI ADFGLAREAL SKPPFTEYVS TRWYRAPEIL LQSSVYDSAV DMWAMGAIMA ELFTLRPLFP
201: GSSEADEIYK ICSILGPPNQ NSWAQGMQLA DAMKFQFPQL ASVSLSLLIP SASRDAIDLI SSLCSWDSIR RPTAAKVLQH SFFQPCFYIP PSPRLRSEGV
301: QKTPSSVGTR GALASDTARR NSVGVLSNTR PVYNFSSTSV NESFRMTGIQ RRLELGHQEY QKERLARNEV KPYVRQPTTR DFTGLPGRDS QRTCNVVEKL
401: GHLTLSSNRG SDICGKLPQL KPQLGRQPPP AMKAGAWHGH SAFPGRPHDI PSAPGYYTRK VAG

Best Arabidopsis Sequence Match ( AT4G19110.1 )
(BLAST)

001: MDRYKLIKEV GDGTFGSVWR AINKQTGEVV AIKKMKKKYY SWDECINLRE VKSLRRMNHP NIVKLKEVIR ENDILYFVFE YMECNLYQLM KDRQKLFAEA
101: DIKNWCFQVF QGLSYMHQRG YFHRDLKPEN LLVSKDIIKI ADFGLAREVN SSPPFTEYVS TRWYRAPEVL LQSYVYTSKV DMWAMGAIMA ELLSLRPIFP
201: GASEADEIYK ICSVIGTPTE ETWLEGLNLA NTINYQFPQL PGVPLSSLMP SASEDAINLI ERLCSWDPSS RPTAAEVLQH PFFQSCFYVP PSLRPKPSVA
301: RTPPPVGPRG SFEHQSVKRY PVSLANAKPF NSYVSPKSNA AFGSGVQRKL DMVNQDGTRN TKPVRSSVRD SKYRPPGKKS PPAASLNKNR VTRSSVSETA
401: DKLANMTIGA TGSRRHSVSV VGQHQQLKPP PMKAGWVGET RDMFLRPTQP TTNAYSRKVA G

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JSF8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.