Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr11P... | Banana | cytosol | 89.68 | 85.71 |
VIT_15s0045g00310.t01 | Wine grape | cytosol | 88.97 | 85.03 |
Solyc12g095860.1.1 | Tomato | cytosol, nucleus | 86.83 | 82.99 |
PGSC0003DMT400075349 | Potato | cytosol | 86.48 | 82.65 |
KRH36887 | Soybean | cytosol, nucleus | 85.77 | 81.97 |
GSMUA_Achr4P04710_001 | Banana | cytosol | 85.77 | 81.97 |
KRH11866 | Soybean | cytosol, nucleus | 85.41 | 81.63 |
GSMUA_Achr8P00030_001 | Banana | cytosol | 89.32 | 81.49 |
KRH42252 | Soybean | cytosol | 84.34 | 80.61 |
KRH58370 | Soybean | cytosol | 85.41 | 80.0 |
AT3G48750.1 | Thale cress | cytosol | 82.92 | 79.25 |
Solyc08g066330.1.1 | Tomato | cytosol | 86.48 | 79.15 |
Bra018036.1-P | Field mustard | cytosol | 82.56 | 78.91 |
CDX68497 | Canola | cytosol | 82.56 | 78.91 |
Solyc11g070140.1.1 | Tomato | cytosol | 79.0 | 75.51 |
Bra029917.1-P | Field mustard | cytosol | 82.92 | 74.68 |
CDX83047 | Canola | cytosol | 82.92 | 74.68 |
PGSC0003DMT400047738 | Potato | cytosol | 78.65 | 72.94 |
GSMUA_Achr3P26790_001 | Banana | cytosol | 68.68 | 72.56 |
PGSC0003DMT400077428 | Potato | cytosol | 76.16 | 71.81 |
CDX87018 | Canola | cytosol | 60.5 | 71.73 |
CDY66197 | Canola | cytosol | 82.56 | 68.64 |
GSMUA_Achr4P04700_001 | Banana | cytosol, extracellular | 69.75 | 62.22 |
CDY05870 | Canola | cytosol, plastid | 81.85 | 60.69 |
GSMUA_Achr11P... | Banana | cytosol | 56.94 | 52.81 |
GSMUA_Achr3P03700_001 | Banana | cytosol | 53.74 | 50.0 |
CDY67496 | Canola | cytosol | 55.16 | 49.05 |
GSMUA_Achr4P02420_001 | Banana | cytosol | 40.93 | 47.72 |
GSMUA_Achr9P12350_001 | Banana | cytosol | 53.74 | 46.89 |
GSMUA_Achr11P... | Banana | cytosol | 53.02 | 44.61 |
GSMUA_Achr3P09020_001 | Banana | cytosol | 45.55 | 27.12 |
GSMUA_Achr9P17590_001 | Banana | cytosol | 45.55 | 25.55 |
GSMUA_Achr7P04820_001 | Banana | cytosol | 35.59 | 25.38 |
GSMUA_Achr11P... | Banana | cytosol | 41.64 | 25.11 |
GSMUA_Achr2P17970_001 | Banana | cytosol | 35.23 | 24.87 |
GSMUA_Achr5P18030_001 | Banana | cytosol | 41.28 | 24.84 |
GSMUA_Achr1P15530_001 | Banana | cytosol | 38.43 | 23.33 |
GSMUA_Achr11P... | Banana | mitochondrion | 35.59 | 23.31 |
GSMUA_Achr8P00940_001 | Banana | cytosol | 37.01 | 23.11 |
GSMUA_Achr8P01120_001 | Banana | nucleus | 45.55 | 22.15 |
GSMUA_Achr8P08900_001 | Banana | nucleus | 45.55 | 19.72 |
GSMUA_Achr5P25400_001 | Banana | nucleus | 46.26 | 18.62 |
GSMUA_Achr11P... | Banana | nucleus | 45.55 | 18.34 |
Protein Annotations
Description
Cell division control protein 2 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr11G03190_001]
Coordinates
chr11:-:2302874..2309408
Molecular Weight (calculated)
32274.3 Da
IEP (calculated)
7.019
GRAVY (calculated)
-0.193
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQYEKVEKI GEGTYGVVYK ARDRLTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVRLQDVV HSEKRIYLVF EYLDLDLKKH MDSCPELAKD
101: PRLIKTYLHQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN ALKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSRN YSTPVDVWSV GCIFAEMANQ
201: RPLFPGDSEI DELFKIFRIL GTPNEEIWPG VTSLPDFKSA FPKWLPKDLT TVVPNLEAAG IDLLSSPLVD THVMLKILLK E
101: PRLIKTYLHQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN ALKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSRN YSTPVDVWSV GCIFAEMANQ
201: RPLFPGDSEI DELFKIFRIL GTPNEEIWPG VTSLPDFKSA FPKWLPKDLT TVVPNLEAAG IDLLSSPLVD THVMLKILLK E
001: MDQYEKVEKI GEGTYGVVYK ARDKVTNETI ALKKIRLEQE DEGVPSTAIR EISLLKEMQH SNIVKLQDVV HSEKRLYLVF EYLDLDLKKH MDSTPDFSKD
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
101: LHMIKTYLYQ ILRGIAYCHS HRVLHRDLKP QNLLIDRRTN SLKLADFGLA RAFGIPVRTF THEVVTLWYR APEILLGSHH YSTPVDIWSV GCIFAEMISQ
201: KPLFPGDSEI DQLFKIFRIM GTPYEDTWRG VTSLPDYKSA FPKWKPTDLE TFVPNLDPDG VDLLSKMLLM DPTKRINARA ALEHEYFKDL GGMP
Arabidopsis Description
CDKA-1Cyclin-dependent kinase A-1 [Source:UniProtKB/Swiss-Prot;Acc:P24100]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.