Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P12510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 63.3 | 61.98 |
GSMUA_Achr11P... | Banana | nucleus | 60.11 | 56.5 |
GSMUA_Achr5P20430_001 | Banana | nucleus | 56.91 | 56.32 |
GSMUA_Achr1P00900_001 | Banana | nucleus | 50.53 | 50.26 |
GSMUA_Achr2P11790_001 | Banana | nucleus | 51.6 | 47.78 |
GSMUA_Achr5P12920_001 | Banana | nucleus | 55.85 | 47.51 |
Os10t0471700-02 | Rice | nucleus | 47.87 | 46.39 |
TraesCS1D01G148400.2 | Wheat | cytosol, nucleus, plastid | 48.94 | 45.32 |
TraesCS1B01G168900.1 | Wheat | cytosol, nucleus, plastid | 48.94 | 45.32 |
TraesCS1A01G151400.1 | Wheat | nucleus | 48.4 | 44.83 |
GSMUA_Achr4P26490_001 | Banana | nucleus | 48.94 | 42.2 |
Zm00001d014046_P001 | Maize | nucleus | 43.09 | 42.19 |
EER91497 | Sorghum | cytosol | 42.02 | 41.36 |
EER95545 | Sorghum | nucleus | 46.81 | 41.31 |
Zm00001d048363_P001 | Maize | nucleus | 46.81 | 40.93 |
HORVU3Hr1G064490.1 | Barley | nucleus | 15.43 | 40.28 |
Os03t0137800-01 | Rice | mitochondrion, nucleus, plastid | 47.34 | 40.27 |
Zm00001d027585_P001 | Maize | nucleus | 45.21 | 39.91 |
TraesCS5A01G506500.1 | Wheat | nucleus | 43.62 | 39.23 |
Solyc09g091780.2.1 | Tomato | nucleus | 42.55 | 38.1 |
PGSC0003DMT400076291 | Potato | nucleus | 41.49 | 37.32 |
GSMUA_Achr1P20410_001 | Banana | nucleus | 44.15 | 36.24 |
GSMUA_Achr6P36640_001 | Banana | nucleus | 47.34 | 36.18 |
HORVU5Hr1G031690.1 | Barley | extracellular | 20.74 | 35.45 |
Solyc12g098310.1.1 | Tomato | nucleus | 43.62 | 35.34 |
KRG92238 | Soybean | nucleus | 42.02 | 35.27 |
PGSC0003DMT400019919 | Potato | nucleus | 43.62 | 35.04 |
TraesCS4D01G332500.1 | Wheat | nucleus | 39.36 | 33.79 |
VIT_05s0029g00040.t01 | Wine grape | nucleus | 45.74 | 33.2 |
HORVU3Hr1G064580.1 | Barley | nucleus | 21.81 | 31.3 |
Bra005565.1-P | Field mustard | nucleus | 36.7 | 30.53 |
CDY59640 | Canola | nucleus | 20.21 | 30.16 |
CDX79470 | Canola | nucleus | 38.3 | 29.03 |
Zm00001d032732_P002 | Maize | mitochondrion | 29.79 | 28.87 |
Bra022897.1-P | Field mustard | nucleus | 38.3 | 28.8 |
GSMUA_Achr5P21770_001 | Banana | nucleus | 44.68 | 28.77 |
CDX84726 | Canola | nucleus | 37.77 | 28.74 |
CDY12181 | Canola | nucleus | 36.17 | 28.45 |
CDY19160 | Canola | nucleus | 36.7 | 28.4 |
Bra021808.1-P | Field mustard | nucleus | 36.17 | 28.33 |
CDY23793 | Canola | nucleus | 36.7 | 28.28 |
HORVU1Hr1G040110.3 | Barley | nucleus, plastid | 28.72 | 27.27 |
AT2G32710.1 | Thale cress | nucleus | 40.43 | 26.3 |
HORVU4Hr1G080410.1 | Barley | nucleus | 44.68 | 22.52 |
Protein Annotations
MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 |
EnsemblPlantsGene:GSMUA_Achr11G21380_001 | EnsemblPlants:GSMUA_Achr11P21380_001 | EnsemblPlants:GSMUA_Achr11T21380_001 | UniProt:M0RU68 | PFAM:PF02234 | PIRSF:PIRSF017811 |
PANTHER:PTHR10265 | PANTHER:PTHR10265:SF23 | UniParc:UPI00029653B7 | SEG:seg | : | : |
Description
Putative Cyclin-dependent kinase inhibitor 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G21380_001]
Coordinates
chr11:-:22028180..22029441
Molecular Weight (calculated)
20905.4 Da
IEP (calculated)
7.507
GRAVY (calculated)
-0.659
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYLRKAKL SGEAAVMEVS HHSSLGVRTR ARSLAAATGQ DSSRAYLELR SRRLEKPLSP PPSCNSEKPG PDARVDFRSP GSVSTSRCSA VAADTEVSFR
101: ETILESGARD SYDRETIPCS LIRDRDPTSR STISAVTVKQ SSPTAHEMEE FFAAAEQLQQ RIFLERYNFD PVTEHPLPGR YEWVKDDL
101: ETILESGARD SYDRETIPCS LIRDRDPTSR STISAVTVKQ SSPTAHEMEE FFAAAEQLQQ RIFLERYNFD PVTEHPLPGR YEWVKDDL
001: MGKYIKKSKV AGAVSVKDKS HPPALGFRTR AAAAKNLALH RLRSHSDEAD SFNYLQLRSR RLVKLPLLTN TRKQQKQQLI PSVNQCQTKN PRASSGPAKK
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
Arabidopsis Description
KRP5Cyclin-dependent kinase inhibitor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.