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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 2
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G32710.1 GSMUA_Achr6P27570_001 AT1G10840.1 20706207
AT2G32710.1 GSMUA_Achr9P07190_001 AT1G10840.1 20706207
AT2G32710.1 GSMUA_Achr3P06030_001 AT1G70210.1 20407024
AT2G32710.1 GSMUA_Achr7P19980_001 AT1G70210.1 20407024
AT2G32710.1 GSMUA_Achr9P28180_001 AT1G70210.1 20407024
AT2G32710.1 GSMUA_Achr6P07430_001 AT1G71380.1 20706207
AT2G32710.1 GSMUA_Achr1P14000_001 AT1G80370.1 20407024
AT2G32710.1 GSMUA_Achr3P25340_001 AT1G80370.1 20407024
AT2G32710.1 GSMUA_Achr11P... AT3G48750.1 11449057
AT2G32710.1 GSMUA_Achr11P... AT3G48750.1 20706207
AT2G32710.1 GSMUA_Achr2P12640_001 AT3G54650.1 18948957
AT2G32710.1 GSMUA_Achr4P21010_001 AT3G54650.1 18948957
AT2G32710.1 GSMUA_Achr4P28520_001 AT3G54650.1 18948957
AT2G32710.1 GSMUA_Achr4P23840_001 AT4G03270.1 20407024
AT2G32710.1 GSMUA_Achr6P24270_001 AT4G03270.1 20407024
AT2G32710.1 GSMUA_Achr9P12120_001 AT4G03270.1 20407024
AT2G32710.1 GSMUA_Achr9P24600_001 AT4G03270.1 20407024
AT2G32710.1 GSMUA_Achr9P30040_001 AT4G03270.1 20407024
AT2G32710.1 GSMUA_Achr3P22960_001 AT4G28230.1 20706207
AT2G32710.1 GSMUA_Achr1P09780_001 AT4G34160.1 20407024
AT2G32710.1 GSMUA_Achr2P05260_001 AT4G34160.1 20407024
AT2G32710.1 GSMUA_Achr3P01010_001 AT4G34160.1 20407024
AT2G32710.1 GSMUA_Achr3P13140_001 AT4G34160.1 20407024
AT2G32710.1 GSMUA_Achr4P20220_001 AT4G34160.1 20407024
AT2G32710.1 GSMUA_AchrUn_... AT4G34160.1 20407024
AT2G32710.1 GSMUA_Achr10P... AT4G37630.1 20407024
AT2G32710.1 GSMUA_Achr4P07110_001 AT4G37630.1 20407024
AT2G32710.1 GSMUA_Achr6P07740_001 AT4G37630.1 20407024
AT2G32710.1 GSMUA_Achr6P16910_001 AT4G37630.1 20407024
AT2G32710.1 GSMUA_Achr11P... AT5G07310.1 20706207
AT2G32710.1 GSMUA_Achr10P... AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr10P... AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr3P06730_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr5P17920_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr5P22980_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr6P02210_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr7P12850_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr7P19040_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr8P23430_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr9P15070_001 AT5G10440.1 20407024
AT2G32710.1 GSMUA_Achr10P... AT5G43080.1 20407024
AT2G32710.1 GSMUA_Achr2P21520_001 AT5G43080.1 20407024
AT2G32710.1 GSMUA_Achr2P21530_001 AT5G43080.1 20407024
AT2G32710.1 GSMUA_Achr6P11130_001 AT5G43080.1 20407024
AT2G32710.1 GSMUA_Achr7P21960_001 AT5G58290.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P12510_001 Banana cytosol, mitochondrion, nucleus, plastid 63.3 61.98
GSMUA_Achr11P... Banana nucleus 60.11 56.5
GSMUA_Achr5P20430_001 Banana nucleus 56.91 56.32
GSMUA_Achr1P00900_001 Banana nucleus 50.53 50.26
GSMUA_Achr2P11790_001 Banana nucleus 51.6 47.78
GSMUA_Achr5P12920_001 Banana nucleus 55.85 47.51
Os10t0471700-02 Rice nucleus 47.87 46.39
TraesCS1D01G148400.2 Wheat cytosol, nucleus, plastid 48.94 45.32
TraesCS1B01G168900.1 Wheat cytosol, nucleus, plastid 48.94 45.32
TraesCS1A01G151400.1 Wheat nucleus 48.4 44.83
GSMUA_Achr4P26490_001 Banana nucleus 48.94 42.2
Zm00001d014046_P001 Maize nucleus 43.09 42.19
EER91497 Sorghum cytosol 42.02 41.36
EER95545 Sorghum nucleus 46.81 41.31
Zm00001d048363_P001 Maize nucleus 46.81 40.93
HORVU3Hr1G064490.1 Barley nucleus 15.43 40.28
Os03t0137800-01 Rice mitochondrion, nucleus, plastid 47.34 40.27
Zm00001d027585_P001 Maize nucleus 45.21 39.91
TraesCS5A01G506500.1 Wheat nucleus 43.62 39.23
Solyc09g091780.2.1 Tomato nucleus 42.55 38.1
PGSC0003DMT400076291 Potato nucleus 41.49 37.32
GSMUA_Achr1P20410_001 Banana nucleus 44.15 36.24
GSMUA_Achr6P36640_001 Banana nucleus 47.34 36.18
HORVU5Hr1G031690.1 Barley extracellular 20.74 35.45
Solyc12g098310.1.1 Tomato nucleus 43.62 35.34
KRG92238 Soybean nucleus 42.02 35.27
PGSC0003DMT400019919 Potato nucleus 43.62 35.04
TraesCS4D01G332500.1 Wheat nucleus 39.36 33.79
VIT_05s0029g00040.t01 Wine grape nucleus 45.74 33.2
HORVU3Hr1G064580.1 Barley nucleus 21.81 31.3
Bra005565.1-P Field mustard nucleus 36.7 30.53
CDY59640 Canola nucleus 20.21 30.16
CDX79470 Canola nucleus 38.3 29.03
Zm00001d032732_P002 Maize mitochondrion 29.79 28.87
Bra022897.1-P Field mustard nucleus 38.3 28.8
GSMUA_Achr5P21770_001 Banana nucleus 44.68 28.77
CDX84726 Canola nucleus 37.77 28.74
CDY12181 Canola nucleus 36.17 28.45
CDY19160 Canola nucleus 36.7 28.4
Bra021808.1-P Field mustard nucleus 36.17 28.33
CDY23793 Canola nucleus 36.7 28.28
HORVU1Hr1G040110.3 Barley nucleus, plastid 28.72 27.27
AT2G32710.1 Thale cress nucleus 40.43 26.3
HORVU4Hr1G080410.1 Barley nucleus 44.68 22.52
Protein Annotations
MapMan:13.1.1.3.1Gene3D:4.10.365.10InterPro:CDIGO:GO:0003674GO:GO:0004861GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0007049GO:GO:0007050
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0019538GO:GO:0030234GO:GO:0071901
EnsemblPlantsGene:GSMUA_Achr11G21380_001EnsemblPlants:GSMUA_Achr11P21380_001EnsemblPlants:GSMUA_Achr11T21380_001UniProt:M0RU68PFAM:PF02234PIRSF:PIRSF017811
PANTHER:PTHR10265PANTHER:PTHR10265:SF23UniParc:UPI00029653B7SEG:seg::
Description
Putative Cyclin-dependent kinase inhibitor 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G21380_001]
Coordinates
chr11:-:22028180..22029441
Molecular Weight (calculated)
20905.4 Da
IEP (calculated)
7.507
GRAVY (calculated)
-0.659
Length
188 amino acids
Sequence
(BLAST)
001: MGKYLRKAKL SGEAAVMEVS HHSSLGVRTR ARSLAAATGQ DSSRAYLELR SRRLEKPLSP PPSCNSEKPG PDARVDFRSP GSVSTSRCSA VAADTEVSFR
101: ETILESGARD SYDRETIPCS LIRDRDPTSR STISAVTVKQ SSPTAHEMEE FFAAAEQLQQ RIFLERYNFD PVTEHPLPGR YEWVKDDL
Best Arabidopsis Sequence Match ( AT3G24810.1 )
(BLAST)
001: MGKYIKKSKV AGAVSVKDKS HPPALGFRTR AAAAKNLALH RLRSHSDEAD SFNYLQLRSR RLVKLPLLTN TRKQQKQQLI PSVNQCQTKN PRASSGPAKK
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
Arabidopsis Description
KRP5Cyclin-dependent kinase inhibitor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRY0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.