Factsheet for HORVU5Hr1G031690.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
nucleus 1
extracellular 3
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	secretory
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G003280.5	nucleus
HORVU2Hr1G014000.1
HORVU2Hr1G068360.8
HORVU2Hr1G077130.1
HORVU2Hr1G107280.1
HORVU3Hr1G067470.2
HORVU3Hr1G114440.21	nucleus
HORVU4Hr1G013320.1	nucleus
HORVU4Hr1G013700.2	nucleus
HORVU4Hr1G069310.3	nucleus
HORVU4Hr1G085830.4
HORVU5Hr1G014320.7
HORVU5Hr1G018180.1	nucleus
HORVU5Hr1G018820.2	nucleus
HORVU5Hr1G050270.8	nucleus
HORVU5Hr1G059770.2	endoplasmic reticulum
HORVU5Hr1G093570.1
HORVU5Hr1G093590.1
HORVU6Hr1G013680.2
HORVU6Hr1G077500.1	nucleus
HORVU7Hr1G117300.3	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32710.1	HORVU2Hr1G068360.8	AT1G10840.1	20706207
AT2G32710.1	HORVU5Hr1G059770.2	AT1G70210.1	20407024
AT2G32710.1	HORVU2Hr1G077130.1	AT1G71380.1	20706207
AT2G32710.1	HORVU3Hr1G114440.21	AT1G80370.1	20407024
AT2G32710.1	HORVU4Hr1G085830.4	AT3G48750.1	11449057
AT2G32710.1	HORVU6Hr1G013680.2	AT3G48750.1	11449057
AT2G32710.1	HORVU4Hr1G085830.4	AT3G48750.1	20706207
AT2G32710.1	HORVU6Hr1G013680.2	AT3G48750.1	20706207
AT2G32710.1	HORVU5Hr1G014320.7	AT3G54650.1	18948957
AT2G32710.1	HORVU5Hr1G093570.1	AT3G54650.1	18948957
AT2G32710.1	HORVU5Hr1G093590.1	AT3G54650.1	18948957
AT2G32710.1	HORVU0Hr1G003280.5	AT4G03270.1	20407024
AT2G32710.1	HORVU7Hr1G117300.3	AT4G03270.1	20407024
AT2G32710.1	HORVU5Hr1G050270.8	AT4G34160.1	20407024
AT2G32710.1	HORVU4Hr1G013700.2	AT4G37630.1	20407024
AT2G32710.1	HORVU5Hr1G018180.1	AT4G37630.1	20407024
AT2G32710.1	HORVU6Hr1G077500.1	AT5G10440.1	20407024
AT2G32710.1	HORVU4Hr1G013320.1	AT5G43080.1	20407024
AT2G32710.1	HORVU4Hr1G069310.3	AT5G43080.1	20407024
AT2G32710.1	HORVU5Hr1G018820.2	AT5G43080.1	20407024
AT2G32710.1	HORVU2Hr1G014000.1	AT5G58290.1	20706207
AT2G32710.1	HORVU2Hr1G107280.1	AT5G58290.1	20706207
AT2G32710.1	HORVU3Hr1G067470.2	AT5G58290.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G064490.1	Barley	nucleus	57.27	87.5
HORVU3Hr1G064580.1	Barley	nucleus	70.0	58.78
TraesCS5A01G506500.1	Wheat	nucleus	67.27	35.41
TraesCS4D01G332500.1	Wheat	nucleus	67.27	33.79
Os03t0137800-01	Rice	mitochondrion, nucleus, plastid	59.09	29.41
Zm00001d048363_P001	Maize	nucleus	51.82	26.51
Zm00001d027585_P001	Maize	nucleus	50.91	26.29
EER95545	Sorghum	nucleus	50.0	25.82
HORVU1Hr1G040110.3	Barley	nucleus, plastid	46.36	25.76
CDY59640	Canola	nucleus	29.09	25.4
GSMUA_Achr11P...	Banana	nucleus	45.45	25.0
GSMUA_Achr1P00900_001	Banana	nucleus	40.91	23.81
GSMUA_Achr2P11790_001	Banana	nucleus	42.73	23.15
GSMUA_Achr5P20430_001	Banana	nucleus	39.09	22.63
GSMUA_Achr8P12510_001	Banana	cytosol, mitochondrion, nucleus, plastid	39.09	22.4
KRG92238	Soybean	nucleus	45.45	22.32
GSMUA_Achr4P26490_001	Banana	nucleus	43.64	22.02
HORVU4Hr1G080410.1	Barley	nucleus	74.55	21.98
GSMUA_Achr5P12920_001	Banana	nucleus	41.82	20.81
GSMUA_Achr11P...	Banana	nucleus	35.45	20.74
PGSC0003DMT400076291	Potato	nucleus	38.18	20.1
Solyc09g091780.2.1	Tomato	nucleus	38.18	20.0
Solyc12g098310.1.1	Tomato	nucleus	37.27	17.67
PGSC0003DMT400019919	Potato	nucleus	37.27	17.52
CDX79470	Canola	nucleus	39.09	17.34
CDX84726	Canola	nucleus	38.18	17.0
VIT_05s0029g00040.t01	Wine grape	nucleus	40.0	16.99
Bra022897.1-P	Field mustard	nucleus	38.18	16.8
CDY23793	Canola	nucleus	36.36	16.39
CDY19160	Canola	nucleus	34.55	15.64
Bra021808.1-P	Field mustard	nucleus	32.73	15.0
AT2G32710.1	Thale cress	nucleus	38.18	14.53
Bra005565.1-P	Field mustard	nucleus	29.09	14.16
CDY12181	Canola	nucleus	29.09	13.39

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	UniProt:A0A287QTB6	InterPro:CDI	GO:GO:0003674	GO:GO:0004861
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0007049
GO:GO:0007050	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234
GO:GO:0071901	EnsemblPlantsGene:HORVU5Hr1G031690	EnsemblPlants:HORVU5Hr1G031690.1	PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265
PANTHER:PTHR10265:SF23	SignalP:SignalP-noTM	UniParc:UPI000B469042	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:203320280..203323262

Molecular Weight (calculated)

12815.6 Da

IEP (calculated)

7.969

GRAVY (calculated)

-0.476

Length

110 amino acids

Sequence
(BLAST)

001: MMMMHLLMIV MIMMHLLTPK GTRETTPCSL IYSSKTMSTP SSTTRASNPS RRMLQTPVCR YVPSSLEMDE FFATDEQQQH QHQTFRDKYN FCPASERPLP
101: GRYEWTALDC

Best Arabidopsis Sequence Match ( AT2G32710.2 )
(BLAST)

001: MGKYIRKSKI DGAGAGAGGG GGGGGGGESS IALMDVVSPS SSSSLGVLTR AKSLALQQQQ QRCLLQKPSS PSSLPPTSAS PNPPSKQKMK KKQQQMNDCG
101: SYLQLRSRRL QKKPPIVVIR STKRRKQQRR NETCGRNPNP RSNLDSIRGD GSRSDSVSES VVFGKDKDLI SEINKDPTFG QNFFDLEEEH TQRTTRESTP
201: CSLIRRPEIM TTPGSSTKLN ICVSESNQRE DSLSRSHRRR PTTPEMDEFF SGAEEEQQKQ FIEKYNFDPV NEQPLPGRFE WTKVDD

Arabidopsis Description

KRP4Cyclin-dependent kinase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.