Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 73.44 | 70.5 |
| GSMUA_Achr5P20430_001 | Banana | nucleus | 65.62 | 66.32 |
| GSMUA_Achr11P... | Banana | nucleus | 61.98 | 63.3 |
| GSMUA_Achr2P11790_001 | Banana | nucleus | 60.42 | 57.14 |
| GSMUA_Achr1P00900_001 | Banana | nucleus | 53.12 | 53.97 |
| GSMUA_Achr5P12920_001 | Banana | nucleus | 60.42 | 52.49 |
| Os10t0471700-02 | Rice | nucleus | 52.6 | 52.06 |
| TraesCS1B01G168900.1 | Wheat | cytosol, nucleus, plastid | 54.69 | 51.72 |
| TraesCS1A01G151400.1 | Wheat | nucleus | 54.17 | 51.23 |
| TraesCS1D01G148400.2 | Wheat | cytosol, nucleus, plastid | 53.65 | 50.74 |
| EER95545 | Sorghum | nucleus | 54.69 | 49.3 |
| Zm00001d014046_P001 | Maize | nucleus | 48.96 | 48.96 |
| Zm00001d048363_P001 | Maize | nucleus | 53.12 | 47.44 |
| Zm00001d027585_P001 | Maize | nucleus | 52.6 | 47.42 |
| EER91497 | Sorghum | cytosol | 46.88 | 47.12 |
| Os03t0137800-01 | Rice | mitochondrion, nucleus, plastid | 53.65 | 46.61 |
| GSMUA_Achr4P26490_001 | Banana | nucleus | 52.6 | 46.33 |
| TraesCS5A01G506500.1 | Wheat | nucleus | 48.44 | 44.5 |
| HORVU3Hr1G064490.1 | Barley | nucleus | 16.15 | 43.06 |
| PGSC0003DMT400076291 | Potato | nucleus | 46.35 | 42.58 |
| Solyc09g091780.2.1 | Tomato | nucleus | 46.35 | 42.38 |
| PGSC0003DMT400019919 | Potato | nucleus | 51.56 | 42.31 |
| Solyc12g098310.1.1 | Tomato | nucleus | 50.0 | 41.38 |
| GSMUA_Achr6P36640_001 | Banana | nucleus | 52.6 | 41.06 |
| GSMUA_Achr1P20410_001 | Banana | nucleus | 47.4 | 39.74 |
| HORVU5Hr1G031690.1 | Barley | extracellular | 22.4 | 39.09 |
| KRG92238 | Soybean | nucleus | 44.79 | 38.39 |
| VIT_05s0029g00040.t01 | Wine grape | nucleus | 51.56 | 38.22 |
| TraesCS4D01G332500.1 | Wheat | nucleus | 41.67 | 36.53 |
| HORVU1Hr1G040110.3 | Barley | nucleus, plastid | 35.94 | 34.85 |
| HORVU3Hr1G064580.1 | Barley | nucleus | 23.44 | 34.35 |
| CDY59640 | Canola | nucleus | 22.4 | 34.13 |
| GSMUA_Achr5P21770_001 | Banana | nucleus | 51.56 | 33.9 |
| Bra005565.1-P | Field mustard | nucleus | 38.02 | 32.3 |
| Bra022897.1-P | Field mustard | nucleus | 41.67 | 32.0 |
| CDX79470 | Canola | nucleus | 41.15 | 31.85 |
| CDX84726 | Canola | nucleus | 40.62 | 31.58 |
| CDY23793 | Canola | nucleus | 39.58 | 31.15 |
| Zm00001d032732_P002 | Maize | mitochondrion | 31.25 | 30.93 |
| CDY19160 | Canola | nucleus | 39.06 | 30.86 |
| CDY12181 | Canola | nucleus | 38.02 | 30.54 |
| Bra021808.1-P | Field mustard | nucleus | 38.02 | 30.42 |
| AT2G32710.1 | Thale cress | nucleus | 42.71 | 28.37 |
| HORVU4Hr1G080410.1 | Barley | nucleus | 47.4 | 24.4 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004860 | GO:GO:0004861 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006469 |
| GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0071901 | EnsemblPlantsGene:GSMUA_Achr8G12510_001 | EnsemblPlants:GSMUA_Achr8P12510_001 | EnsemblPlants:GSMUA_Achr8T12510_001 | UniProt:M0TPV4 |
| PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF23 | UniParc:UPI000294937B | SEG:seg |
Description
Putative Cyclin-dependent kinase inhibitor 5 [Source:GMGC_GENE;Acc:GSMUA_Achr8G12510_001]
Coordinates
chr8:+:9322038..9325066
Molecular Weight (calculated)
21176.0 Da
IEP (calculated)
7.293
GRAVY (calculated)
-0.446
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYIRKAKV SGEVAVMEVS HQSSLGVRTR ARTMAATAAQ DSSRGYLELR SRRLEKPLPP PSSSSSSIAY SGPLGSVSTM RCSAADAEVS FGENILEADV
101: LDRFSRETTP CSLIRDPEAI QTPGSTNRPA RSMATSLRPQ SVCHNIPTAQ ELEEFFAGAE QLQQRIFIER YNFDPVNDCP LPGRYEWVKV DF
101: LDRFSRETTP CSLIRDPEAI QTPGSTNRPA RSMATSLRPQ SVCHNIPTAQ ELEEFFAGAE QLQQRIFIER YNFDPVNDCP LPGRYEWVKV DF
001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHRFVVFF FFFLFFMFPL LVCTRESTPC NFVEDMEIMV TPGSSTRSMC RATKEYTREQ DNVIPTTSEM
201: EEFFAYAEQQ QQRLFMEKYN FDIVNDIPLS GRYEWVQVKP
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHRFVVFF FFFLFFMFPL LVCTRESTPC NFVEDMEIMV TPGSSTRSMC RATKEYTREQ DNVIPTTSEM
201: EEFFAYAEQQ QQRLFMEKYN FDIVNDIPLS GRYEWVQVKP
Arabidopsis Description
KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [endoplasmic reticulum,plastid,nucleus,plasma membrane]
SUBAcon: [endoplasmic reticulum,plastid,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.