Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G168900.1 | Wheat | cytosol, nucleus, plastid | 93.1 | 93.1 |
| TraesCS1A01G151400.1 | Wheat | nucleus | 89.16 | 89.16 |
| Os10t0471700-02 | Rice | nucleus | 66.5 | 69.59 |
| Zm00001d014046_P001 | Maize | nucleus | 64.04 | 67.71 |
| EER91497 | Sorghum | cytosol | 63.55 | 67.54 |
| GSMUA_Achr11P... | Banana | nucleus | 53.2 | 54.0 |
| GSMUA_Achr8P12510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 50.74 | 53.65 |
| GSMUA_Achr5P20430_001 | Banana | nucleus | 49.26 | 52.63 |
| HORVU1Hr1G040110.3 | Barley | nucleus, plastid | 49.75 | 51.01 |
| GSMUA_Achr2P11790_001 | Banana | nucleus | 50.25 | 50.25 |
| GSMUA_Achr11P... | Banana | nucleus | 45.32 | 48.94 |
| GSMUA_Achr1P00900_001 | Banana | nucleus | 45.32 | 48.68 |
| GSMUA_Achr5P12920_001 | Banana | nucleus | 51.23 | 47.06 |
| GSMUA_Achr4P26490_001 | Banana | nucleus | 47.78 | 44.5 |
| TraesCS4D01G332500.1 | Wheat | nucleus | 47.78 | 44.29 |
| KRG92238 | Soybean | nucleus | 48.77 | 44.2 |
| PGSC0003DMT400076291 | Potato | nucleus | 43.35 | 42.11 |
| Solyc09g091780.2.1 | Tomato | nucleus | 43.35 | 41.9 |
| PGSC0003DMT400019919 | Potato | nucleus | 46.8 | 40.6 |
| Solyc12g098310.1.1 | Tomato | nucleus | 45.81 | 40.09 |
| VIT_05s0029g00040.t01 | Wine grape | nucleus | 47.78 | 37.45 |
| CDY59640 | Canola | nucleus | 21.67 | 34.92 |
| CDX84726 | Canola | nucleus | 39.9 | 32.79 |
| CDY23793 | Canola | nucleus | 39.41 | 32.79 |
| Bra005565.1-P | Field mustard | nucleus | 36.45 | 32.74 |
| CDX79470 | Canola | nucleus | 39.9 | 32.66 |
| CDY19160 | Canola | nucleus | 38.92 | 32.51 |
| Bra022897.1-P | Field mustard | nucleus | 39.9 | 32.4 |
| Bra021808.1-P | Field mustard | nucleus | 37.93 | 32.08 |
| CDY12181 | Canola | nucleus | 35.47 | 30.13 |
| AT2G32710.1 | Thale cress | nucleus | 40.89 | 28.72 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G148400.2 | EnsemblPlantsGene:TraesCS1D01G148400 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0030234 | InterPro:CDI | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF41 | PFAM:PF02234 | PIRSF:PIRSF017811 |
| SEG:seg | MapMan:13.1.1.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:204295150..204298139
Molecular Weight (calculated)
22424.5 Da
IEP (calculated)
6.767
GRAVY (calculated)
-0.684
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYMRKPKV SGEVAVMEVA AAPLGVRTRA RALAMQRQPQ GAPGAKDQGE YLELRSRKLE KLPLPPPPAR RRAAAAERVE AEAEADEVSF GENVLESEAM
101: GRGTRETTPC SLIRDSGTIS TPGSTTRPSH SNSHRRVQAP ARHIIPCSAE MNEFFSAAEQ PQQQAFIDNE ECQLRVQCGF DTYNFDPVND CPLPGRYEWV
201: KLD
101: GRGTRETTPC SLIRDSGTIS TPGSTTRPSH SNSHRRVQAP ARHIIPCSAE MNEFFSAAEQ PQQQAFIDNE ECQLRVQCGF DTYNFDPVND CPLPGRYEWV
201: KLD
001: MGKYIKKSKV AGAVSVKDKS HPPALGFRTR AAAAKNLALH RLRSHSDEAD SFNYLQLRSR RLVKLPLLTN TRKQQKQQLI PSVNQCQTKN PRASSGPAKK
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
101: LEPDTTTEEA CGDNERISRS DCNFGDKGFD LESENRSMIS DSKSIQSEIE DFFASAEQQQ QRFFIQKYNF DIVSDNPLPG RYEWVKVMP
Arabidopsis Description
KRP5Cyclin-dependent kinase inhibitor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.