Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX67944 | nucleus |
| CDX68497 | |
| CDX69832 | nucleus |
| CDX72453 | nucleus |
| CDX72643 | nucleus |
| CDX73462 | |
| CDX75405 | nucleus |
| CDX76265 | nucleus |
| CDX78253 | |
| CDX79389 | nucleus |
| CDX83047 | |
| CDX83262 | |
| CDX87018 | |
| CDX87305 | nucleus |
| CDX88666 | |
| CDX89193 | |
| CDX90892 | nucleus |
| CDX96319 | |
| CDX97009 | nucleus |
| CDX97915 | |
| CDY02806 | |
| CDY03686 | |
| CDY03687 | |
| CDY05870 | |
| CDY11608 | endoplasmic reticulum |
| CDY12259 | |
| CDY12260 | |
| CDY14051 | |
| CDY18994 | |
| CDY19324 | |
| CDY20600 | |
| CDY20601 | |
| CDY20970 | |
| CDY21951 | nucleus |
| CDY22116 | nucleus |
| CDY22369 | nucleus |
| CDY29570 | nucleus |
| CDY29942 | |
| CDY31173 | |
| CDY32714 | |
| CDY32995 | |
| CDY34673 | |
| CDY34854 | |
| CDY37592 | nucleus |
| CDY37936 | |
| CDY37939 | |
| CDY38664 | nucleus |
| CDY38800 | endoplasmic reticulum |
| CDY39984 | nucleus |
| CDY43865 | |
| CDY48212 | nucleus |
| CDY49278 | nucleus |
| CDY55173 | |
| CDY55831 | |
| CDY57741 | nucleus |
| CDY58566 | |
| CDY59943 | endoplasmic reticulum |
| CDY61993 | nucleus |
| CDY64339 | |
| CDY66197 | |
| CDY66787 | |
| CDY67142 | endoplasmic reticulum |
| CDY67496 | |
| CDY69708 | nucleus |
| CDY70684 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005565.1-P | Field mustard | nucleus | 77.82 | 82.3 |
| CDY59640 | Canola | nucleus | 34.73 | 65.87 |
| CDY19160 | Canola | nucleus | 54.81 | 53.91 |
| CDY23793 | Canola | nucleus | 54.39 | 53.28 |
| CDX84726 | Canola | nucleus | 54.39 | 52.63 |
| CDX79470 | Canola | nucleus | 51.46 | 49.6 |
| AT2G32710.1 | Thale cress | nucleus | 54.39 | 44.98 |
| PGSC0003DMT400076291 | Potato | nucleus | 36.82 | 42.11 |
| Solyc12g098310.1.1 | Tomato | nucleus | 40.59 | 41.81 |
| PGSC0003DMT400019919 | Potato | nucleus | 40.59 | 41.45 |
| Solyc09g091780.2.1 | Tomato | nucleus | 35.98 | 40.95 |
| HORVU3Hr1G064490.1 | Barley | nucleus | 12.13 | 40.28 |
| CDY00044 | Canola | nucleus | 32.22 | 40.1 |
| GSMUA_Achr1P00900_001 | Banana | nucleus | 31.38 | 39.68 |
| GSMUA_Achr5P20430_001 | Banana | nucleus | 30.96 | 38.95 |
| KRG92238 | Soybean | nucleus | 36.4 | 38.84 |
| CDY19935 | Canola | nucleus | 31.8 | 38.78 |
| EER91497 | Sorghum | cytosol | 30.96 | 38.74 |
| CDY71628 | Canola | nucleus | 32.22 | 38.69 |
| GSMUA_Achr11P... | Banana | nucleus | 32.22 | 38.5 |
| Zm00001d014046_P001 | Maize | nucleus | 30.54 | 38.02 |
| GSMUA_Achr8P12510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 30.54 | 38.02 |
| Os10t0471700-02 | Rice | nucleus | 30.54 | 37.63 |
| Zm00001d027585_P001 | Maize | nucleus | 33.47 | 37.56 |
| CDX93038 | Canola | nucleus | 30.96 | 37.19 |
| TraesCS1B01G168900.1 | Wheat | cytosol, nucleus, plastid | 30.96 | 36.45 |
| GSMUA_Achr4P26490_001 | Banana | nucleus | 33.05 | 36.24 |
| GSMUA_Achr11P... | Banana | nucleus | 28.45 | 36.17 |
| CDX86277 | Canola | cytosol, mitochondrion, plastid | 16.32 | 36.11 |
| TraesCS1A01G151400.1 | Wheat | nucleus | 30.54 | 35.96 |
| CDX85366 | Canola | nucleus | 30.96 | 35.75 |
| TraesCS1D01G148400.2 | Wheat | cytosol, nucleus, plastid | 30.13 | 35.47 |
| Zm00001d048363_P001 | Maize | nucleus | 31.8 | 35.35 |
| Os03t0137800-01 | Rice | mitochondrion, nucleus, plastid | 32.22 | 34.84 |
| CDX86276 | Canola | nucleus | 30.13 | 34.78 |
| EER95545 | Sorghum | nucleus | 30.96 | 34.74 |
| GSMUA_Achr1P20410_001 | Banana | nucleus | 32.22 | 33.62 |
| GSMUA_Achr2P11790_001 | Banana | nucleus | 28.03 | 33.0 |
| GSMUA_Achr5P12920_001 | Banana | nucleus | 30.13 | 32.58 |
| TraesCS5A01G506500.1 | Wheat | nucleus | 28.45 | 32.54 |
| VIT_05s0029g00040.t01 | Wine grape | nucleus | 34.31 | 31.66 |
| HORVU3Hr1G064580.1 | Barley | nucleus | 17.15 | 31.3 |
| GSMUA_Achr6P36640_001 | Banana | nucleus | 31.8 | 30.89 |
| HORVU5Hr1G031690.1 | Barley | extracellular | 13.39 | 29.09 |
| TraesCS4D01G332500.1 | Wheat | nucleus | 26.36 | 28.77 |
| Zm00001d032732_P002 | Maize | mitochondrion | 21.76 | 26.8 |
| HORVU1Hr1G040110.3 | Barley | nucleus, plastid | 21.76 | 26.26 |
| GSMUA_Achr5P21770_001 | Banana | nucleus | 31.38 | 25.68 |
| HORVU4Hr1G080410.1 | Barley | nucleus | 30.54 | 19.57 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | GO:A0A078FG22 | UniProt:A0A078FG22 | InterPro:CDI | EnsemblPlants:CDY12181 |
| ProteinID:CDY12181 | ProteinID:CDY12181.1 | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 | EnsemblPlantsGene:GSBRNA2T00061190001 |
| PFAM:PF02234 | PIRSF:PIRSF017811 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF41 | UniParc:UPI0004EDE23F | SEG:seg |
Description
BnaC04g12110DBnaC04g12110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FG22]
Coordinates
chrLK032018:-:201179..203094
Molecular Weight (calculated)
26525.0 Da
IEP (calculated)
9.441
GRAVY (calculated)
-0.971
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKYMRKSKI DGEAISLLEV SPSSPSSSLG VLTRAKSLAL QRKPSSSFSL PTSPSPNPNQ KTTDCGGSYL QLRSRRLQKK SPIVVIKRRK QQLRRKESCG
101: RSPKSDSVVE SGVGSKEKVL NDEINNKGST SLEDKLLELQ GNESLNRSTS ESTPCTLKRE AEINTSLGSS TKLNNGISDN SDQIEENLSG SHRPTTPDMD
201: RFFSGAEEEQ QKQFIEKYNF DPVNEQPLPG RFEWEKVDN
101: RSPKSDSVVE SGVGSKEKVL NDEINNKGST SLEDKLLELQ GNESLNRSTS ESTPCTLKRE AEINTSLGSS TKLNNGISDN SDQIEENLSG SHRPTTPDMD
201: RFFSGAEEEQ QKQFIEKYNF DPVNEQPLPG RFEWEKVDN
001: MGKYIRKSKI DGAGAGAGGG GGGGGGGESS IALMDVVSPS SSSSLGVLTR AKSLALQQQQ QRCLLQKPSS PSSLPPTSAS PNPPSKQKMK KKQQQMNDCG
101: SYLQLRSRRL QKKPPIVVIR STKRRKQQRR NETCGRNPNP RSNLDSIRGD GSRSDSVSES VVFGKDKDLI SEINKDPTFG QNFFDLEEEH TQSFNRTTRE
201: STPCSLIRRP EIMTTPGSST KLNICVSESN QREDSLSRSH RRRPTTPEMD EFFSGAEEEQ QKQFIEKYNF DPVNEQPLPG RFEWTKVDD
101: SYLQLRSRRL QKKPPIVVIR STKRRKQQRR NETCGRNPNP RSNLDSIRGD GSRSDSVSES VVFGKDKDLI SEINKDPTFG QNFFDLEEEH TQSFNRTTRE
201: STPCSLIRRP EIMTTPGSST KLNICVSESN QREDSLSRSH RRRPTTPEMD EFFSGAEEEQ QKQFIEKYNF DPVNEQPLPG RFEWTKVDD
Arabidopsis Description
KRP4Cyclin-dependent kinase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.