Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12259 | Canola | cytosol | 95.3 | 93.83 |
| Bra023245.1-P | Field mustard | cytosol | 79.31 | 52.38 |
| CDX83262 | Canola | cytosol, mitochondrion | 50.47 | 40.45 |
| CDY65287 | Canola | cytosol | 11.91 | 39.18 |
| CDY15358 | Canola | cytosol, extracellular, plastid | 16.93 | 38.57 |
| CDY31173 | Canola | cytosol, mitochondrion | 47.34 | 37.94 |
| CDY66546 | Canola | cytosol | 28.84 | 36.8 |
| CDY00206 | Canola | nucleus | 18.81 | 33.15 |
| CDY71858 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.6 | 29.37 |
| CDY60959 | Canola | cytosol, mitochondrion, plastid | 25.08 | 28.88 |
| CDY10678 | Canola | cytosol | 34.17 | 28.24 |
| AT1G46984.1 | Thale cress | mitochondrion | 32.6 | 28.11 |
| CDY30661 | Canola | cytosol | 20.38 | 28.02 |
| CDX79453 | Canola | plastid | 31.03 | 26.05 |
| CDY67066 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 30.72 | 24.2 |
| CDY19088 | Canola | cytosol | 30.72 | 24.2 |
| CDX98860 | Canola | cytosol | 30.41 | 24.01 |
| CDX70134 | Canola | cytosol | 29.47 | 23.86 |
| CDY08137 | Canola | cytosol | 30.41 | 23.77 |
| CDY42088 | Canola | cytosol | 30.41 | 23.72 |
| CDY60961 | Canola | cytosol | 28.84 | 23.17 |
| CDY05937 | Canola | cytosol | 24.45 | 23.08 |
| CDY72410 | Canola | cytosol | 26.65 | 22.91 |
| CDY12627 | Canola | cytosol | 28.53 | 22.86 |
| CDY15359 | Canola | cytosol, plastid | 28.53 | 22.86 |
| CDY19134 | Canola | mitochondrion | 27.27 | 22.77 |
| CDY51358 | Canola | cytosol | 26.96 | 22.75 |
| CDY52272 | Canola | cytosol | 1.57 | 22.73 |
| CDY42089 | Canola | cytosol | 28.84 | 22.55 |
| CDY15336 | Canola | plastid | 27.59 | 22.45 |
| CDY15333 | Canola | mitochondrion | 26.96 | 22.4 |
| CDY72470 | Canola | golgi, nucleus, plasma membrane | 27.27 | 22.36 |
| CDY15352 | Canola | mitochondrion | 28.21 | 22.28 |
| CDY08136 | Canola | cytosol | 28.21 | 22.22 |
| CDY19137 | Canola | cytosol, mitochondrion, plastid | 28.21 | 22.17 |
| CDY60955 | Canola | cytosol, extracellular, plastid, vacuole | 21.32 | 22.15 |
| CDY15324 | Canola | cytosol | 26.33 | 21.93 |
| AT1G46840.1 | Thale cress | cytosol | 32.6 | 21.89 |
| CDY19132 | Canola | mitochondrion | 26.96 | 21.88 |
| CDY15344 | Canola | mitochondrion | 23.51 | 21.68 |
| CDY15327 | Canola | cytosol | 26.02 | 21.56 |
| CDY15332 | Canola | cytosol | 26.02 | 21.28 |
| CDX79454 | Canola | cytosol | 20.06 | 21.26 |
| CDY42091 | Canola | mitochondrion | 20.38 | 21.04 |
| CDX97551 | Canola | mitochondrion | 25.39 | 20.66 |
| CDY12626 | Canola | cytosol | 24.14 | 20.59 |
| CDY67859 | Canola | cytosol, mitochondrion | 23.82 | 20.11 |
| CDY29772 | Canola | cytosol | 25.71 | 20.1 |
| CDY66545 | Canola | cytosol, peroxisome, plastid | 22.88 | 19.89 |
| CDY29771 | Canola | cytosol, plastid | 20.06 | 19.22 |
| CDY29942 | Canola | cytosol | 17.87 | 19.19 |
| CDY08200 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 26.02 | 18.78 |
| CDY70182 | Canola | extracellular | 7.84 | 18.38 |
| CDY46037 | Canola | extracellular | 7.84 | 18.38 |
| CDY12239 | Canola | mitochondrion | 15.67 | 17.92 |
| CDY65288 | Canola | mitochondrion | 15.36 | 17.75 |
| CDY15326 | Canola | cytosol | 6.9 | 17.19 |
| CDY52273 | Canola | cytosol, plastid | 15.99 | 17.11 |
| CDY70684 | Canola | cytosol | 10.03 | 15.61 |
| CDY67625 | Canola | mitochondrion | 12.23 | 15.18 |
| CDY19127 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 27.27 | 15.13 |
| CDX97874 | Canola | extracellular | 12.54 | 14.93 |
| AT1G46912.1 | Thale cress | plasma membrane | 14.11 | 14.42 |
| CDY19131 | Canola | mitochondrion | 26.02 | 13.95 |
| CDY30662 | Canola | extracellular, mitochondrion | 5.64 | 13.04 |
| CDY42092 | Canola | cytosol | 5.02 | 11.35 |
| CDY15353 | Canola | cytosol | 17.87 | 11.07 |
| CDY18160 | Canola | cytosol | 5.96 | 10.67 |
| CDY26564 | Canola | mitochondrion | 11.91 | 8.3 |
| CDY15999 | Canola | cytosol, mitochondrion | 16.61 | 8.23 |
| CDY15342 | Canola | cytosol | 3.13 | 4.39 |
| CDY15357 | Canola | cytosol, nucleus, plastid | 0.31 | 1.82 |
Protein Annotations
| EnsemblPlants:CDY12260 | EnsemblPlantsGene:GSBRNA2T00061306001 | Gene3D:1.20.1280.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | PANTHER:PTHR31790 | PANTHER:PTHR31790:SF10 | PFAM:PF00646 |
| ProteinID:CDY12260 | ProteinID:CDY12260.1 | SMART:SM00256 | SUPFAM:SSF81383 | UniParc:UPI0004EE0A7F | UniProt:A0A078FD10 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA09g24600DBnaA09g24600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD10]
Coordinates
chrLK032019:+:116025..118323
Molecular Weight (calculated)
36552.3 Da
IEP (calculated)
9.511
GRAVY (calculated)
-0.277
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MANWTRLIQL DIGQVGHDAS NSPNGELDWT WASCVSPKPR ILVSGTLNGD LDLAYPICPM AGRTMLTIAK IVMSLEKYNN PVKHLKIIKG HIQSSKNSST
101: YVGGNSETLP IDLIIEILKR LPAKAIALCR CVSKEWDSIL CSPHFAKSFL TSSSTRPQLL FTFEFKGKWH FFSSPQLHFN ENISVVAPDY HMGVSGDWYK
201: EVCLSANGFV YLYEKQMLKG KMERVPVLCN PSTGQKIPLP KVRAKNNELR SFLGYDPIEK QFKWRWKKPF YVYYYNVERK SVRRVEIQGI EEKVFMDPAA
301: HHGEVFTFPN HVENLMFRQ
101: YVGGNSETLP IDLIIEILKR LPAKAIALCR CVSKEWDSIL CSPHFAKSFL TSSSTRPQLL FTFEFKGKWH FFSSPQLHFN ENISVVAPDY HMGVSGDWYK
201: EVCLSANGFV YLYEKQMLKG KMERVPVLCN PSTGQKIPLP KVRAKNNELR SFLGYDPIEK QFKWRWKKPF YVYYYNVERK SVRRVEIQGI EEKVFMDPAA
301: HHGEVFTFPN HVENLMFRQ
001: MPSKEDAMNN QKNDSMDRRK LVRRNSQSSV STYVRETLHI DLIIEIVSRL PLDSIAICRC VSKQWASILQ RPDFAESFLT KSLSRPRLLF TFRSGSKWYY
101: FSSPQPQTFG KNLSVVAKDY SAELWVLDDT KNVKWSKYKF VLPYTASEEV KKSIWATDSG ELVWTLSSPL SHPLYVYYYN LESQSVREVE IKGMKDKVSR
201: DIGNSLVTFT NYVENLMFLQ
101: FSSPQPQTFG KNLSVVAKDY SAELWVLDDT KNVKWSKYKF VLPYTASEEV KKSIWATDSG ELVWTLSSPL SHPLYVYYYN LESQSVREVE IKGMKDKVSR
201: DIGNSLVTFT NYVENLMFLQ
Arabidopsis Description
F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:Q9C628]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.