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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15358 Canola cytosol, extracellular, plastid 43.65 39.29
CDY65287 Canola cytosol 29.37 38.14
Bra023809.1-P Field mustard mitochondrion 79.37 30.49
CDY52273 Canola cytosol, plastid 66.67 28.19
CDY60959 Canola cytosol, mitochondrion, plastid 50.79 23.1
CDX97551 Canola mitochondrion 66.67 21.43
CDY60955 Canola cytosol, extracellular, plastid, vacuole 49.21 20.2
CDY15332 Canola cytosol 57.14 18.46
CDY00206 Canola nucleus 26.19 18.23
CDY15336 Canola plastid 56.35 18.11
CDY19137 Canola cytosol, mitochondrion, plastid 57.14 17.73
CDY15352 Canola mitochondrion 56.35 17.57
CDY15324 Canola cytosol 53.17 17.49
CDY29771 Canola cytosol, plastid 44.44 16.82
CDY19134 Canola mitochondrion 49.21 16.23
CDY15333 Canola mitochondrion 49.21 16.15
CDY15359 Canola cytosol, plastid 50.79 16.08
CDY66546 Canola cytosol 31.75 16.0
CDY60961 Canola cytosol 49.21 15.62
CDY51358 Canola cytosol 46.83 15.61
CDY15327 Canola cytosol 47.62 15.58
CDY15344 Canola mitochondrion 42.06 15.32
CDX79454 Canola cytosol 35.71 14.95
CDY30661 Canola cytosol 24.6 13.36
CDY19132 Canola mitochondrion 41.27 13.23
CDX98860 Canola cytosol 42.06 13.12
CDY19088 Canola cytosol 40.48 12.59
CDY66545 Canola cytosol, peroxisome, plastid 36.51 12.53
CDY42089 Canola cytosol 40.48 12.5
AT3G23960.1 Thale cress cytosol 39.68 12.44
CDY67066 Canola cytosol, mitochondrion, nucleus, peroxisome 39.68 12.35
CDX70134 Canola cytosol 38.1 12.18
CDY12239 Canola mitochondrion 26.19 11.83
CDY19131 Canola mitochondrion 55.56 11.76
CDY42091 Canola mitochondrion 28.57 11.65
CDY12260 Canola cytosol 29.37 11.6
CDY12259 Canola cytosol 29.37 11.42
CDY72470 Canola golgi, nucleus, plasma membrane 34.13 11.05
CDY29772 Canola cytosol 35.71 11.03
CDY42088 Canola cytosol 35.71 11.0
CDY12627 Canola cytosol 33.33 10.55
CDX79453 Canola plastid 30.95 10.26
CDY31173 Canola cytosol, mitochondrion 31.75 10.05
CDX83262 Canola cytosol, mitochondrion 30.95 9.8
CDY05937 Canola cytosol 26.19 9.76
CDY72410 Canola cytosol 28.57 9.7
CDY08136 Canola cytosol 30.16 9.38
CDY08137 Canola cytosol 30.16 9.31
CDY19127 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole 42.06 9.22
CDY10678 Canola cytosol 27.78 9.07
CDY08200 Canola cytosol, golgi, mitochondrion, plasma membrane 30.16 8.6
CDY67859 Canola cytosol, mitochondrion 23.81 7.94
CDY12626 Canola cytosol 23.02 7.75
CDY15357 Canola cytosol, nucleus, plastid 3.17 7.27
CDY46037 Canola extracellular 6.35 5.88
CDY70182 Canola extracellular 6.35 5.88
CDY15326 Canola cytosol 5.56 5.47
CDY30662 Canola extracellular, mitochondrion 5.56 5.07
CDY15999 Canola cytosol, mitochondrion 20.63 4.04
CDY26564 Canola mitochondrion 14.29 3.93
CDY15353 Canola cytosol 15.87 3.88
CDY18160 Canola cytosol 4.76 3.37
CDY29942 Canola cytosol 6.35 2.69
CDX97874 Canola extracellular 4.76 2.24
CDY42092 Canola cytosol 2.38 2.13
CDY67625 Canola mitochondrion 3.17 1.56
CDY70684 Canola cytosol 2.38 1.46
CDY65288 Canola mitochondrion 3.17 1.45
CDY15342 Canola cytosol 0.79 0.44
CDY52272 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY71858EnsemblPlantsGene:GSBRNA2T00020832001GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:F-box-like_dom_sf
InterPro:F-box_domInterPro:IPR001810PANTHER:PTHR31790PANTHER:PTHR31790:SF47PFAM:PF00646ProteinID:CDY71858
ProteinID:CDY71858.1SEG:segSMART:SM00256SUPFAM:SSF81383UniParc:UPI0004EEC7F6UniProt:A0A078JW58
MapMan:35.1:::::
Description
BnaAnng39020DBnaAnng39020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JW58]
Coordinates
chrLK047824:+:429..809
Molecular Weight (calculated)
14560.5 Da
IEP (calculated)
9.036
GRAVY (calculated)
-0.186
Length
126 amino acids
Sequence
(BLAST)
001: MTSRRTASRS MTSNHRNSLP IPDDLAVEIF SRLPSKAIGR CRCACKLLSS MLRRQDFTDL FLTKSSARPQ ILFACQDYHS NYIFFSSSPH PEEENSSYVV
101: AAKSSCKFPQ FLQVIWLYEW LLVLWS
Best Arabidopsis Sequence Match ( AT2G31470.2 )
(BLAST)
001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SECTWRGLVN FCWNDWYK
Arabidopsis Description
DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.