CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036902.1-P	Field mustard	cytosol	96.57	96.33
CDY29771	Canola	cytosol, plastid	43.38	53.15
CDY15344	Canola	mitochondrion	36.52	43.06
AT2G19630.1	Thale cress	cytosol, nucleus, plasma membrane	31.13	42.76
CDY72470	Canola	golgi, nucleus, plasma membrane	38.97	40.87
CDX79454	Canola	cytosol	30.15	40.86
CDX98860	Canola	cytosol	40.44	40.84
CDY46037	Canola	extracellular	13.48	40.44
CDY70182	Canola	extracellular	13.48	40.44
CDY42088	Canola	cytosol	40.44	40.34
CDY12239	Canola	mitochondrion	27.45	40.14
CDY15358	Canola	cytosol, extracellular, plastid	13.73	40.0
CDY42089	Canola	cytosol	39.95	39.95
CDY60955	Canola	cytosol, extracellular, plastid, vacuole	29.9	39.74
CDY12626	Canola	cytosol	36.27	39.57
CDX70134	Canola	cytosol	37.99	39.34
CDY65287	Canola	cytosol	9.31	39.18
CDY12627	Canola	cytosol	37.99	38.94
CDY15324	Canola	cytosol	36.52	38.9
CDY19088	Canola	cytosol	38.48	38.77
CDY19134	Canola	mitochondrion	36.27	38.74
CDY42091	Canola	mitochondrion	29.17	38.51
CDY65288	Canola	mitochondrion	25.98	38.41
CDY66546	Canola	cytosol	23.53	38.4
CDY60961	Canola	cytosol	37.25	38.29
CDY67066	Canola	cytosol, mitochondrion, nucleus, peroxisome	37.99	38.27
CDY15332	Canola	cytosol	36.52	38.21
CDY15359	Canola	cytosol, plastid	37.01	37.94
CDY19132	Canola	mitochondrion	36.52	37.91
CDX79453	Canola	plastid	35.29	37.89
CDY67859	Canola	cytosol, mitochondrion	35.05	37.83
CDY66545	Canola	cytosol, peroxisome, plastid	33.82	37.6
CDY15333	Canola	mitochondrion	35.29	37.5
CDY15336	Canola	plastid	35.78	37.24
CDY67625	Canola	mitochondrion	23.28	36.97
CDY52273	Canola	cytosol, plastid	26.96	36.91
CDY15352	Canola	mitochondrion	36.52	36.88
CDY15327	Canola	cytosol	34.56	36.62
CDY18160	Canola	cytosol	15.93	36.52
CDY51358	Canola	cytosol	33.82	36.51
CDY19137	Canola	cytosol, mitochondrion, plastid	35.78	35.96
CDY00206	Canola	nucleus	15.93	35.91
CDY71858	Canola	cytosol, mitochondrion, nucleus, plastid	11.03	35.71
CDY05937	Canola	cytosol	29.41	35.5
CDX83262	Canola	cytosol, mitochondrion	34.31	35.18
CDY08137	Canola	cytosol	35.05	35.05
CDY08136	Canola	cytosol	34.56	34.81
CDY42092	Canola	cytosol	12.01	34.75
CDX97551	Canola	mitochondrion	33.33	34.69
CDY31173	Canola	cytosol, mitochondrion	33.82	34.67
CDY60959	Canola	cytosol, mitochondrion, plastid	23.53	34.66
CDY15357	Canola	cytosol, nucleus, plastid	4.66	34.55
CDY10678	Canola	cytosol	32.11	33.94
CDY72410	Canola	cytosol	30.15	33.15
CDY15326	Canola	cytosol	10.29	32.81
CDY19127	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.36	31.48
CDY30661	Canola	cytosol	17.89	31.47
CDX97874	Canola	extracellular	20.34	30.97
CDY70684	Canola	cytosol	14.95	29.76
CDY29942	Canola	cytosol	21.08	28.96
CDY08200	Canola	cytosol, golgi, mitochondrion, plasma membrane	31.13	28.73
CDY30662	Canola	extracellular, mitochondrion	9.31	27.54
CDY12259	Canola	cytosol	21.08	26.54
CDY12260	Canola	cytosol	20.1	25.71
CDY19131	Canola	mitochondrion	35.29	24.2
CDY15353	Canola	cytosol	28.68	22.72
CDY26564	Canola	mitochondrion	21.32	19.0
CDY52272	Canola	cytosol	0.98	18.18
CDY15999	Canola	cytosol, mitochondrion	24.02	15.22
CDY15342	Canola	cytosol	7.11	12.72

Protein Annotations

Gene3D:1.20.1280.50	MapMan:35.1	UniProt:A0A078GX51	EnsemblPlants:CDY29772	ProteinID:CDY29772	ProteinID:CDY29772.1
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00043631001	InterPro:IPR001810	PFAM:PF00646	PFAM:PF08268	PANTHER:PTHR31790
PANTHER:PTHR31790:SF47	SMART:SM00256	SUPFAM:SSF81383	TIGRFAMs:TIGR01640	UniParc:UPI0004EE23A9	:

Description

BnaA01g18940DBnaA01g18940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX51]

Coordinates

chrLK032243:+:430146..431478

Molecular Weight (calculated)

46198.6 Da

IEP (calculated)

7.455

GRAVY (calculated)

-0.127

Length

408 amino acids

Sequence
(BLAST)

001: METQQTLNVS WDSQRNTLPK TSDNGRESSS ASPIPTDVIV DIFSRLPLKS IAMCRCVSKL WASVLRLPHF TELFLTKSSS RLPQLLHARV TNSELFLFSS
101: ASPHPDENSS SPPVVASRHM KLSFGGFGEI SCGRPVSGLV FVKHVRVLDG EKETSLAICN PSTRQVLHLP KVEMKRLKVR SMFGYDPVDK QYKVLCMTTD
201: GGHYQVLTLG GSWRMLECCI PHYDYPLLKE ICIDGVLYYK SINQSTQTYL IVCFDVRSEN FRPIEAKGSL GRAVLTGDMV NYGGRFGLII CEDNRGNVGA
301: INRRSSRFKL WVLEDVEKQE WSERVFVLPA EWKNVVGEHR LNFVGVASRT NEIVLSSWYP INCFYLFYLD PEIDTVVRVE MQGVDMDVSN YAVLQAFLDH
401: VEDVKLYA

Best Arabidopsis Sequence Match ( AT2G31470.1 )
(BLAST)

001: MKSRRQNVSV ARQTILGRDE NFEPIPIDLV IEIFSRSPVK SIARCRCVSK LWASILRLPY FTELYLTKSC ARPRLLFACQ KHRELFFFST PQPHNPNESS
101: SPLAASFHMK IPFDGRFNII SPIGGLVFVR YEQILKGRKT PEFVSAICNP STGQSLTLPK PKTRKRIWGT SHFGYDPIEK QFKVLSMNIG DGVYKEHYVL
201: TLGTENLSWR RIECSIPHVH GSKGICINGV LYYRAKADMF SGTLMIVCFD VRFEKFSYIK ILKPTTTLIS YNGKLASLVW EGPSYICGKR FEMWVLGDPE
301: KHEWLKHTYE LRPRWQNVLG EDLLIFAGMT GTNEIVLSPK YPSHPFYVFY YNLERNTIRR VEIQGMGAFK VNEDYIFLDH VEDVKLI

Arabidopsis Description

DORF-box protein DOR [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.